RNA–Protein interactions for RNA: ENST00000534462.1

SCYL1-215, Transcript of SCY1 like pseudokinase 1, humanhuman

TSL 3

Gene SCYL1, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCYL1-215ENST00000534462 LGR6Q9HBX8 967 aa24.62■■□□□ 1.53
SCYL1-215ENST00000534462 NUDCQ9Y266 331 aa24.62■■□□□ 1.53
SCYL1-215ENST00000534462 HMGB2P26583 209 aaKnown RBP24.61■■□□□ 1.53
SCYL1-215ENST00000534462 ATP6V1AP38606 617 aa24.61■■□□□ 1.53
SCYL1-215ENST00000534462 SGIP1Q9BQI5 828 aa24.61■■□□□ 1.53
SCYL1-215ENST00000534462 U2AF1L5P0DN76 240 aaPredicted RBP24.6■■□□□ 1.53
SCYL1-215ENST00000534462 U2AF1Q01081 240 aaKnown RBP eCLIP24.6■■□□□ 1.53
SCYL1-215ENST00000534462 COL23A1Q86Y22 540 aaPredicted RBP24.6■■□□□ 1.53
SCYL1-215ENST00000534462 RBM42Q9BTD8 480 aaKnown RBP24.6■■□□□ 1.53
SCYL1-215ENST00000534462 RSPH6AQ9H0K4 717 aa24.6■■□□□ 1.53
SCYL1-215ENST00000534462 RNMTO43148 476 aaKnown RBP24.59■■□□□ 1.53
SCYL1-215ENST00000534462 PRKAR2BP31323 418 aa24.59■■□□□ 1.53
SCYL1-215ENST00000534462 SLC16A10Q8TF71 515 aa24.59■■□□□ 1.53
SCYL1-215ENST00000534462 AK7Q96M32 723 aa24.59■■□□□ 1.53
SCYL1-215ENST00000534462 SLC4A9Q96Q91 983 aa24.59■■□□□ 1.53
SCYL1-215ENST00000534462 VIRMAQ69YN4 1812 aaKnown RBP24.58■■□□□ 1.53
SCYL1-215ENST00000534462 MSH5O43196 834 aa24.58■■□□□ 1.53
SCYL1-215ENST00000534462 AMIGO3Q86WK7 504 aa24.58■■□□□ 1.53
SCYL1-215ENST00000534462 PHACTR3Q96KR7 559 aa24.58■■□□□ 1.53
SCYL1-215ENST00000534462 SLC52A2Q9HAB3 445 aa24.58■■□□□ 1.53
SCYL1-215ENST00000534462 MRC1P22897 1456 aa24.57■■□□□ 1.52
SCYL1-215ENST00000534462 ADAMTS7Q9UKP4 1686 aa24.56■■□□□ 1.52
SCYL1-215ENST00000534462 SMIM5Q71RC9 77 aa24.56■■□□□ 1.52
SCYL1-215ENST00000534462 GAS2L2Q8NHY3 880 aa24.56■■□□□ 1.52
SCYL1-215ENST00000534462 UBR3Q6ZT12 1888 aa24.55■■□□□ 1.52
SCYL1-215ENST00000534462 PTCD1O75127 700 aaKnown RBP24.55■■□□□ 1.52
SCYL1-215ENST00000534462 MAP3K5Q99683 1374 aa24.54■■□□□ 1.52
SCYL1-215ENST00000534462 ZNF831Q5JPB2 1677 aa24.54■■□□□ 1.52
SCYL1-215ENST00000534462 PHF14O94880 888 aa24.54■■□□□ 1.52
SCYL1-215ENST00000534462 RALBP1Q15311 655 aa24.54■■□□□ 1.52
SCYL1-215ENST00000534462 FLAD1Q8NFF5 587 aa24.54■■□□□ 1.52
SCYL1-215ENST00000534462 COL24A1Q17RW2 1714 aa24.53■■□□□ 1.52
SCYL1-215ENST00000534462 GNAT3A8MTJ3 354 aa24.53■■□□□ 1.52
SCYL1-215ENST00000534462 ARXQ96QS3 562 aa24.53■■□□□ 1.52
SCYL1-215ENST00000534462 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.52■■□□□ 1.52
SCYL1-215ENST00000534462 GNPATO15228 680 aa24.52■■□□□ 1.52
SCYL1-215ENST00000534462 FCHSD2O94868 740 aa24.52■■□□□ 1.52
SCYL1-215ENST00000534462 IL17REQ8NFR9 667 aa24.51■■□□□ 1.51
SCYL1-215ENST00000534462 COL5A3P25940 1745 aaPredicted RBP24.5■■□□□ 1.51
SCYL1-215ENST00000534462 POLD1P28340 1107 aa24.5■■□□□ 1.51
SCYL1-215ENST00000534462 SLC39A6Q13433 755 aa24.5■■□□□ 1.51
SCYL1-215ENST00000534462 MSL1Q68DK7 614 aa24.5■■□□□ 1.51
SCYL1-215ENST00000534462 FHDC1Q9C0D6 1143 aaPredicted RBP24.5■■□□□ 1.51
SCYL1-215ENST00000534462 SSFA2P28290 1259 aa24.49■■□□□ 1.51
SCYL1-215ENST00000534462 TJP1Q07157 1748 aa24.47■■□□□ 1.51
SCYL1-215ENST00000534462 CNTNAP4Q9C0A0 1308 aa24.47■■□□□ 1.51
SCYL1-215ENST00000534462 RC3H1Q5TC82 1133 aaKnown RBP24.46■■□□□ 1.51
SCYL1-215ENST00000534462 SYT17Q9BSW7 474 aa24.46■■□□□ 1.51
SCYL1-215ENST00000534462 KCPQ6ZWJ8 1503 aa24.45■■□□□ 1.51
SCYL1-215ENST00000534462 MYH14Q7Z406 1995 aaKnown RBP24.45■■□□□ 1.51
SCYL1-215ENST00000534462 TEFQ10587 303 aa24.45■■□□□ 1.5
SCYL1-215ENST00000534462 CEMIPQ8WUJ3 1361 aa24.44■■□□□ 1.5
SCYL1-215ENST00000534462 MYBBP1AQ9BQG0 1328 aaKnown RBP24.44■■□□□ 1.5
SCYL1-215ENST00000534462 CICQ96RK0 1608 aaPredicted RBP24.44■■□□□ 1.5
SCYL1-215ENST00000534462 RTCBQ9Y3I0 505 aaKnown RBP24.44■■□□□ 1.5
SCYL1-215ENST00000534462 DNAJC10Q8IXB1 793 aa24.43■■□□□ 1.5
SCYL1-215ENST00000534462 SIPA1L3O60292 1781 aaPredicted RBP24.43■■□□□ 1.5
SCYL1-215ENST00000534462 CRKLP46109 303 aaKnown RBP24.42■■□□□ 1.5
SCYL1-215ENST00000534462 KLHL34Q8N239 644 aa24.42■■□□□ 1.5
SCYL1-215ENST00000534462 UBR2Q8IWV8 1755 aa24.42■■□□□ 1.5
SCYL1-215ENST00000534462 RPS6KA4O75676 772 aa24.41■■□□□ 1.5
SCYL1-215ENST00000534462 TRAPPC3LQ5T215 181 aa24.41■■□□□ 1.5
SCYL1-215ENST00000534462 MCM10Q7L590 875 aa24.4■■□□□ 1.5
SCYL1-215ENST00000534462 TTC5Q8N0Z6 440 aa24.4■■□□□ 1.5
SCYL1-215ENST00000534462 RTF1Q92541 710 aaKnown RBP24.4■■□□□ 1.5
SCYL1-215ENST00000534462 PLEKHF1Q96S99 279 aa24.4■■□□□ 1.5
SCYL1-215ENST00000534462 INTS5Q6P9B9 1019 aaKnown RBP24.39■■□□□ 1.49
SCYL1-215ENST00000534462 ARHGEF1Q92888 912 aaKnown RBP24.39■■□□□ 1.49
SCYL1-215ENST00000534462 NEFMP07197 916 aa24.38■■□□□ 1.49
SCYL1-215ENST00000534462 ADRA2BP18089 450 aa24.38■■□□□ 1.49
SCYL1-215ENST00000534462 DCTN1Q14203 1278 aa24.38■■□□□ 1.49
SCYL1-215ENST00000534462 ZNF790Q6PG37 636 aa24.38■■□□□ 1.49
SCYL1-215ENST00000534462 PRKRIP1Q9H875 184 aaPredicted RBP24.38■■□□□ 1.49
SCYL1-215ENST00000534462 CYP19A1P11511 503 aaPredicted RBP24.37■■□□□ 1.49
SCYL1-215ENST00000534462 VSIG10Q8N0Z9 540 aa24.37■■□□□ 1.49
SCYL1-215ENST00000534462 HTATSF1O43719 755 aaKnown RBP24.36■■□□□ 1.49
SCYL1-215ENST00000534462 ZNF496Q96IT1 587 aaPredicted RBP24.36■■□□□ 1.49
SCYL1-215ENST00000534462 CCDC87Q9NVE4 849 aa24.36■■□□□ 1.49
SCYL1-215ENST00000534462 DCAF8L1A6NGE4 600 aa24.35■■□□□ 1.49
SCYL1-215ENST00000534462 BTBD11A6QL63 1104 aa24.35■■□□□ 1.49
SCYL1-215ENST00000534462 RFC4P35249 363 aa24.35■■□□□ 1.49
SCYL1-215ENST00000534462 PNNQ9H307 717 aaKnown RBP24.35■■□□□ 1.49
SCYL1-215ENST00000534462 DLG5Q8TDM6 1919 aa24.35■■□□□ 1.49
SCYL1-215ENST00000534462 C4AP0C0L4 1744 aa24.35■■□□□ 1.49
SCYL1-215ENST00000534462 KCNQ3O43525 872 aa24.34■■□□□ 1.49
SCYL1-215ENST00000534462 NLGN2Q8NFZ4 835 aa24.34■■□□□ 1.49
SCYL1-215ENST00000534462 MAPK8IP3Q9UPT6 1336 aa24.34■■□□□ 1.49
SCYL1-215ENST00000534462 HEG1Q9ULI3 1381 aa24.33■■□□□ 1.49
SCYL1-215ENST00000534462 ZNF316A6NFI3 1004 aaPredicted RBP24.33■■□□□ 1.49
SCYL1-215ENST00000534462 NFE2L2Q16236 605 aa24.33■■□□□ 1.49
SCYL1-215ENST00000534462 GYS1P13807 737 aa24.31■■□□□ 1.48
SCYL1-215ENST00000534462 FMNL2Q96PY5 1086 aa24.31■■□□□ 1.48
SCYL1-215ENST00000534462 SRP68Q9UHB9 627 aaKnown RBP24.31■■□□□ 1.48
SCYL1-215ENST00000534462 ZBTB1Q9Y2K1 713 aa24.31■■□□□ 1.48
SCYL1-215ENST00000534462 SOS1Q07889 1333 aaPredicted RBP24.31■■□□□ 1.48
SCYL1-215ENST00000534462 MMP10P09238 476 aa24.3■■□□□ 1.48
SCYL1-215ENST00000534462 NLGN1Q8N2Q7 840 aa24.3■■□□□ 1.48
SCYL1-215ENST00000534462 USP42Q9H9J4 1324 aaKnown RBP24.29■■□□□ 1.48
SCYL1-215ENST00000534462 UTRNP46939 3433 aa24.29■■□□□ 1.48
SCYL1-215ENST00000534462 STARD3NLO95772 234 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms