RNA–Protein interactions for RNA: ENST00000534284.1

CYCSP28-201, Transcript of cytochrome c, somatic pseudogene 28, humanhuman

BASIC

Gene CYCSP28, Length 321 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP28-201ENST00000534284 BCL2L13Q9BXK5 485 aa6.64□□□□□ -1.35
CYCSP28-201ENST00000534284 ESF1Q9H501 851 aaKnown RBP6.64□□□□□ -1.35
CYCSP28-201ENST00000534284 LRRC9Q6ZRR7 1453 aa6.64□□□□□ -1.35
CYCSP28-201ENST00000534284 FANCD2Q9BXW9 1451 aa6.64□□□□□ -1.35
CYCSP28-201ENST00000534284 RBM47A0AV96 593 aaKnown RBP6.63□□□□□ -1.35
CYCSP28-201ENST00000534284 ZBTB7BO15156 539 aaPredicted RBP6.63□□□□□ -1.35
CYCSP28-201ENST00000534284 LGR5O75473 907 aa6.63□□□□□ -1.35
CYCSP28-201ENST00000534284 RAB15P59190 212 aa6.63□□□□□ -1.35
CYCSP28-201ENST00000534284 GLYCTKQ8IVS8 523 aa6.63□□□□□ -1.35
CYCSP28-201ENST00000534284 C1orf216Q8TAB5 229 aa6.63□□□□□ -1.35
CYCSP28-201ENST00000534284 FOXJ1Q92949 421 aa6.63□□□□□ -1.35
CYCSP28-201ENST00000534284 ANO2Q9NQ90 1003 aa6.63□□□□□ -1.35
CYCSP28-201ENST00000534284 CXXC1Q9P0U4 656 aaPredicted RBP6.63□□□□□ -1.35
CYCSP28-201ENST00000534284 THOC2Q8NI27 1593 aaKnown RBP6.62□□□□□ -1.35
CYCSP28-201ENST00000534284 LAMC3Q9Y6N6 1575 aa6.62□□□□□ -1.35
CYCSP28-201ENST00000534284 FMN1Q68DA7 1419 aa6.62□□□□□ -1.35
CYCSP28-201ENST00000534284 CASKIN1Q8WXD9 1431 aa6.62□□□□□ -1.35
CYCSP28-201ENST00000534284 UNCXA6NJT0 531 aa6.62□□□□□ -1.35
CYCSP28-201ENST00000534284 RNF223E7ERA6 249 aa6.62□□□□□ -1.35
CYCSP28-201ENST00000534284 H3BRB1 525 aa6.62□□□□□ -1.35
CYCSP28-201ENST00000534284 ZNF211Q13398 564 aaPredicted RBP6.62□□□□□ -1.35
CYCSP28-201ENST00000534284 DNAJC14Q6Y2X3 702 aaPredicted RBP6.62□□□□□ -1.35
CYCSP28-201ENST00000534284 SH3RF1Q7Z6J0 888 aa6.62□□□□□ -1.35
CYCSP28-201ENST00000534284 ZNF511Q8NB15 262 aa6.62□□□□□ -1.35
CYCSP28-201ENST00000534284 TUT1Q9H6E5 874 aaKnown RBP6.62□□□□□ -1.35
CYCSP28-201ENST00000534284 SETD5Q9C0A6 1442 aa6.61□□□□□ -1.35
CYCSP28-201ENST00000534284 MYCP01106 439 aaPredicted RBP6.61□□□□□ -1.35
CYCSP28-201ENST00000534284 GGCXP38435 758 aa6.61□□□□□ -1.35
CYCSP28-201ENST00000534284 SLC19A1P41440 591 aa6.61□□□□□ -1.35
CYCSP28-201ENST00000534284 MRRFQ96E11 262 aaKnown RBP6.61□□□□□ -1.35
CYCSP28-201ENST00000534284 MKNK1Q9BUB5 465 aa6.61□□□□□ -1.35
CYCSP28-201ENST00000534284 KIF21AQ7Z4S6 1674 aa6.61□□□□□ -1.35
CYCSP28-201ENST00000534284 CTTNBP2Q8WZ74 1663 aa6.61□□□□□ -1.35
CYCSP28-201ENST00000534284 TOPBP1Q92547 1522 aa6.6□□□□□ -1.35
CYCSP28-201ENST00000534284 ANKRD33BA6NCL7 494 aa6.6□□□□□ -1.35
CYCSP28-201ENST00000534284 GIPC2Q8TF65 315 aa6.6□□□□□ -1.35
CYCSP28-201ENST00000534284 EGFL7Q9UHF1 273 aa6.6□□□□□ -1.35
CYCSP28-201ENST00000534284 CDV3Q9UKY7 258 aaKnown RBP6.6□□□□□ -1.35
CYCSP28-201ENST00000534284 FCF1Q9Y324 198 aaKnown RBP6.6□□□□□ -1.35
CYCSP28-201ENST00000534284 PCDHGA11Q9Y5H2 935 aa6.6□□□□□ -1.35
CYCSP28-201ENST00000534284 PPEF1O14829 653 aaPredicted RBP6.59□□□□□ -1.35
CYCSP28-201ENST00000534284 IGSF3O75054 1194 aa6.59□□□□□ -1.35
CYCSP28-201ENST00000534284 MAPK1P28482 360 aa6.59□□□□□ -1.35
CYCSP28-201ENST00000534284 OCLNQ16625 522 aa6.59□□□□□ -1.35
CYCSP28-201ENST00000534284 ZNF326Q5BKZ1 582 aaKnown RBP6.59□□□□□ -1.35
CYCSP28-201ENST00000534284 SPRYD7Q5W111 196 aa6.59□□□□□ -1.35
CYCSP28-201ENST00000534284 TAS1R3Q7RTX0 852 aa6.59□□□□□ -1.35
CYCSP28-201ENST00000534284 CCDC125Q86Z20 511 aa6.59□□□□□ -1.35
CYCSP28-201ENST00000534284 SEPT12Q8IYM1 358 aa6.59□□□□□ -1.35
CYCSP28-201ENST00000534284 BCL11AQ9H165 835 aa6.59□□□□□ -1.35
CYCSP28-201ENST00000534284 POLA1P09884 1462 aaPredicted RBP6.59□□□□□ -1.36
CYCSP28-201ENST00000534284 RAB3GAP2Q9H2M9 1393 aa6.58□□□□□ -1.36
CYCSP28-201ENST00000534284 PCF11O94913 1555 aaKnown RBP6.58□□□□□ -1.36
CYCSP28-201ENST00000534284 ZBTB24O43167 697 aaPredicted RBP6.58□□□□□ -1.36
CYCSP28-201ENST00000534284 ICMTO60725 284 aa6.58□□□□□ -1.36
CYCSP28-201ENST00000534284 DKK1O94907 266 aa6.58□□□□□ -1.36
CYCSP28-201ENST00000534284 S1PR4O95977 384 aa6.58□□□□□ -1.36
CYCSP28-201ENST00000534284 ZNF16P17020 682 aaPredicted RBP6.58□□□□□ -1.36
CYCSP28-201ENST00000534284 C4orf48Q5BLP8 95 aa6.58□□□□□ -1.36
CYCSP28-201ENST00000534284 LCE2AQ5TA79 106 aaPredicted RBP6.58□□□□□ -1.36
CYCSP28-201ENST00000534284 LIAT1Q6ZQX7 453 aa6.58□□□□□ -1.36
CYCSP28-201ENST00000534284 TSEN2Q8NCE0 465 aaKnown RBP6.58□□□□□ -1.36
CYCSP28-201ENST00000534284 GTF3C2Q8WUA4 911 aaPredicted RBP6.58□□□□□ -1.36
CYCSP28-201ENST00000534284 USP35Q9P2H5 1018 aa6.58□□□□□ -1.36
CYCSP28-201ENST00000534284 PDS5BQ9NTI5 1447 aa6.58□□□□□ -1.36
CYCSP28-201ENST00000534284 WDR97A6NE52 1622 aa6.58□□□□□ -1.36
CYCSP28-201ENST00000534284 DGAT1O75907 488 aa6.57□□□□□ -1.36
CYCSP28-201ENST00000534284 PKDCCQ504Y2 493 aa6.57□□□□□ -1.36
CYCSP28-201ENST00000534284 ZNF598Q86UK7 904 aaKnown RBP6.57□□□□□ -1.36
CYCSP28-201ENST00000534284 VTI1AQ96AJ9 217 aa6.57□□□□□ -1.36
CYCSP28-201ENST00000534284 C21orf2O43822 256 aa6.56□□□□□ -1.36
CYCSP28-201ENST00000534284 GDF9O60383 454 aa6.56□□□□□ -1.36
CYCSP28-201ENST00000534284 PTCD1O75127 700 aaKnown RBP6.56□□□□□ -1.36
CYCSP28-201ENST00000534284 PRR20EP86478 221 aa6.56□□□□□ -1.36
CYCSP28-201ENST00000534284 PRR20CP86479 221 aa6.56□□□□□ -1.36
CYCSP28-201ENST00000534284 PRR20DP86480 221 aa6.56□□□□□ -1.36
CYCSP28-201ENST00000534284 PRR20BP86481 221 aa6.56□□□□□ -1.36
CYCSP28-201ENST00000534284 PRR20AP86496 221 aa6.56□□□□□ -1.36
CYCSP28-201ENST00000534284 ZSCAN29Q8IWY8 852 aaPredicted RBP6.56□□□□□ -1.36
CYCSP28-201ENST00000534284 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.56□□□□□ -1.36
CYCSP28-201ENST00000534284 KCTD15Q96SI1 283 aaPredicted RBP6.56□□□□□ -1.36
CYCSP28-201ENST00000534284 SEPT3Q9UH03 358 aa6.56□□□□□ -1.36
CYCSP28-201ENST00000534284 CCDC18Q5T9S5 1454 aa6.55□□□□□ -1.36
CYCSP28-201ENST00000534284 ABCA5Q8WWZ7 1642 aa6.55□□□□□ -1.36
CYCSP28-201ENST00000534284 ESPNB1AK53 854 aa6.55□□□□□ -1.36
CYCSP28-201ENST00000534284 SH3BP2P78314 561 aa6.55□□□□□ -1.36
CYCSP28-201ENST00000534284 FKBP4Q02790 459 aaKnown RBP eCLIP6.55□□□□□ -1.36
CYCSP28-201ENST00000534284 SF3B2Q13435 895 aaKnown RBP6.55□□□□□ -1.36
CYCSP28-201ENST00000534284 VASH1Q7L8A9 365 aaPredicted RBP6.55□□□□□ -1.36
CYCSP28-201ENST00000534284 TRIM52Q96A61 297 aa6.55□□□□□ -1.36
CYCSP28-201ENST00000534284 C1QTNF2Q9BXJ5 285 aa6.55□□□□□ -1.36
CYCSP28-201ENST00000534284 DCTN4Q9UJW0 460 aa6.55□□□□□ -1.36
CYCSP28-201ENST00000534284 SAMD9Q5K651 1589 aa6.55□□□□□ -1.36
CYCSP28-201ENST00000534284 MAPKBP1O60336 1514 aa6.55□□□□□ -1.36
CYCSP28-201ENST00000534284 FGD6Q6ZV73 1430 aa6.54□□□□□ -1.36
CYCSP28-201ENST00000534284 M0R2N6 131 aa6.54□□□□□ -1.36
CYCSP28-201ENST00000534284 TNFRSF10AO00220 468 aa6.54□□□□□ -1.36
CYCSP28-201ENST00000534284 WEE1P30291 646 aa6.54□□□□□ -1.36
CYCSP28-201ENST00000534284 FKBP5Q13451 457 aaPredicted RBP6.54□□□□□ -1.36
CYCSP28-201ENST00000534284 MTMR3Q13615 1198 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms