RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 NLGN2Q8NFZ4 835 aa12.1□□□□□ -0.47
COPB1-211ENST00000534234 PKD1L3Q7Z443 1732 aa12.1□□□□□ -0.47
COPB1-211ENST00000534234 PELP1Q8IZL8 1130 aaKnown RBP12.09□□□□□ -0.47
COPB1-211ENST00000534234 RBM42Q9BTD8 480 aaKnown RBP12.09□□□□□ -0.47
COPB1-211ENST00000534234 GNPATO15228 680 aa12.09□□□□□ -0.47
COPB1-211ENST00000534234 SSFA2P28290 1259 aa12.09□□□□□ -0.47
COPB1-211ENST00000534234 CNGB1Q14028 1251 aaPredicted RBP12.08□□□□□ -0.48
COPB1-211ENST00000534234 NFATC2IPQ8NCF5 419 aa12.08□□□□□ -0.48
COPB1-211ENST00000534234 SLC4A9Q96Q91 983 aa12.08□□□□□ -0.48
COPB1-211ENST00000534234 KDRP35968 1356 aa12.08□□□□□ -0.48
COPB1-211ENST00000534234 TOGARAM1Q9Y4F4 1720 aa12.07□□□□□ -0.48
COPB1-211ENST00000534234 DIAPH1O60610 1272 aaKnown RBP12.07□□□□□ -0.48
COPB1-211ENST00000534234 HMOX1P09601 288 aa12.06□□□□□ -0.48
COPB1-211ENST00000534234 CD2APQ9Y5K6 639 aa12.06□□□□□ -0.48
COPB1-211ENST00000534234 KDM6AO15550 1401 aaPredicted RBP12.06□□□□□ -0.48
COPB1-211ENST00000534234 QSER1Q2KHR3 1735 aa12.06□□□□□ -0.48
COPB1-211ENST00000534234 PTCD1O75127 700 aaKnown RBP12.05□□□□□ -0.48
COPB1-211ENST00000534234 AKAP4Q5JQC9 854 aa12.05□□□□□ -0.48
COPB1-211ENST00000534234 TRAPPC3LQ5T215 181 aa12.05□□□□□ -0.48
COPB1-211ENST00000534234 ZNF784Q8NCA9 323 aaPredicted RBP12.05□□□□□ -0.48
COPB1-211ENST00000534234 RTCBQ9Y3I0 505 aaKnown RBP12.05□□□□□ -0.48
COPB1-211ENST00000534234 RC3H1Q5TC82 1133 aaKnown RBP12.05□□□□□ -0.48
COPB1-211ENST00000534234 C5P01031 1676 aa12.04□□□□□ -0.48
COPB1-211ENST00000534234 C4BP0C0L5 1744 aa12.04□□□□□ -0.48
COPB1-211ENST00000534234 GRIN3BO60391 1043 aa12.04□□□□□ -0.48
COPB1-211ENST00000534234 LGR6Q9HBX8 967 aa12.04□□□□□ -0.48
COPB1-211ENST00000534234 ITGB4P16144 1822 aa12.04□□□□□ -0.48
COPB1-211ENST00000534234 NPC1L1Q9UHC9 1359 aa12.03□□□□□ -0.48
COPB1-211ENST00000534234 RPS6KA4O75676 772 aa12.03□□□□□ -0.48
COPB1-211ENST00000534234 YBX3P16989 372 aaKnown RBP eCLIP12.03□□□□□ -0.48
COPB1-211ENST00000534234 MTHFSDQ2M296 383 aaKnown RBP12.03□□□□□ -0.48
COPB1-211ENST00000534234 ARHGEF1Q92888 912 aaKnown RBP12.03□□□□□ -0.48
COPB1-211ENST00000534234 TUBGCP6Q96RT7 1819 aa12.02□□□□□ -0.48
COPB1-211ENST00000534234 NLGN1Q8N2Q7 840 aa12.02□□□□□ -0.49
COPB1-211ENST00000534234 SLC52A2Q9HAB3 445 aa12.02□□□□□ -0.49
COPB1-211ENST00000534234 COL24A1Q17RW2 1714 aa12.01□□□□□ -0.49
COPB1-211ENST00000534234 U2SURPO15042 1029 aaKnown RBP12.01□□□□□ -0.49
COPB1-211ENST00000534234 RNMTO43148 476 aaKnown RBP12.01□□□□□ -0.49
COPB1-211ENST00000534234 RFC4P35249 363 aa12.01□□□□□ -0.49
COPB1-211ENST00000534234 UTRNP46939 3433 aa12.01□□□□□ -0.49
COPB1-211ENST00000534234 CNTNAP4Q9C0A0 1308 aa12.01□□□□□ -0.49
COPB1-211ENST00000534234 MMP10P09238 476 aa12.01□□□□□ -0.49
COPB1-211ENST00000534234 CRKLP46109 303 aaKnown RBP12.01□□□□□ -0.49
COPB1-211ENST00000534234 TAF1LQ8IZX4 1826 aa11.99□□□□□ -0.49
COPB1-211ENST00000534234 SLC39A6Q13433 755 aa11.99□□□□□ -0.49
COPB1-211ENST00000534234 GYS1P13807 737 aa11.98□□□□□ -0.49
COPB1-211ENST00000534234 DNAJC10Q8IXB1 793 aa11.98□□□□□ -0.49
COPB1-211ENST00000534234 CFAP53Q96M91 514 aa11.98□□□□□ -0.49
COPB1-211ENST00000534234 WWC3Q9ULE0 1092 aa11.98□□□□□ -0.49
COPB1-211ENST00000534234 INTS5Q6P9B9 1019 aaKnown RBP11.97□□□□□ -0.49
COPB1-211ENST00000534234 GAS2L2Q8NHY3 880 aa11.96□□□□□ -0.49
COPB1-211ENST00000534234 CCDC87Q9NVE4 849 aa11.96□□□□□ -0.49
COPB1-211ENST00000534234 PARP3Q9Y6F1 533 aa11.96□□□□□ -0.49
COPB1-211ENST00000534234 UBR3Q6ZT12 1888 aa11.96□□□□□ -0.49
COPB1-211ENST00000534234 GNAT3A8MTJ3 354 aa11.96□□□□□ -0.5
COPB1-211ENST00000534234 TGFB2P61812 414 aa11.96□□□□□ -0.5
COPB1-211ENST00000534234 POTEDQ86YR6 584 aa11.96□□□□□ -0.5
COPB1-211ENST00000534234 IL17REQ8NFR9 667 aa11.96□□□□□ -0.5
COPB1-211ENST00000534234 SRP68Q9UHB9 627 aaKnown RBP11.96□□□□□ -0.5
COPB1-211ENST00000534234 NUDCQ9Y266 331 aa11.96□□□□□ -0.5
COPB1-211ENST00000534234 CYP19A1P11511 503 aaPredicted RBP11.95□□□□□ -0.5
COPB1-211ENST00000534234 PPP2R1AP30153 589 aa11.95□□□□□ -0.5
COPB1-211ENST00000534234 TEFQ10587 303 aa11.95□□□□□ -0.5
COPB1-211ENST00000534234 FKBP8Q14318 412 aa11.95□□□□□ -0.5
COPB1-211ENST00000534234 PHACTR3Q96KR7 559 aa11.95□□□□□ -0.5
COPB1-211ENST00000534234 COL3A1P02461 1466 aaPredicted RBP11.94□□□□□ -0.5
COPB1-211ENST00000534234 USP42Q9H9J4 1324 aaKnown RBP11.94□□□□□ -0.5
COPB1-211ENST00000534234 A0A0G2JLW4 131 aa11.94□□□□□ -0.5
COPB1-211ENST00000534234 ZPR1O75312 459 aa11.94□□□□□ -0.5
COPB1-211ENST00000534234 PRKAR2BP31323 418 aa11.94□□□□□ -0.5
COPB1-211ENST00000534234 TTC5Q8N0Z6 440 aa11.94□□□□□ -0.5
COPB1-211ENST00000534234 VSIG10Q8N0Z9 540 aa11.94□□□□□ -0.5
COPB1-211ENST00000534234 U2AF1L5P0DN76 240 aaPredicted RBP11.93□□□□□ -0.5
COPB1-211ENST00000534234 U2AF1Q01081 240 aaKnown RBP eCLIP11.93□□□□□ -0.5
COPB1-211ENST00000534234 RSPH6AQ9H0K4 717 aa11.93□□□□□ -0.5
COPB1-211ENST00000534234 ZNF831Q5JPB2 1677 aa11.93□□□□□ -0.5
COPB1-211ENST00000534234 DPEP1P16444 411 aa11.92□□□□□ -0.5
COPB1-211ENST00000534234 USPL1Q5W0Q7 1092 aa11.92□□□□□ -0.5
COPB1-211ENST00000534234 ZNF790Q6PG37 636 aa11.92□□□□□ -0.5
COPB1-211ENST00000534234 ZBTB1Q9Y2K1 713 aa11.92□□□□□ -0.5
COPB1-211ENST00000534234 SOS1Q07889 1333 aaPredicted RBP11.92□□□□□ -0.5
COPB1-211ENST00000534234 FCHSD2O94868 740 aa11.92□□□□□ -0.5
COPB1-211ENST00000534234 STARD3NLO95772 234 aa11.92□□□□□ -0.5
COPB1-211ENST00000534234 TM4SF1P30408 202 aa11.92□□□□□ -0.5
COPB1-211ENST00000534234 C1QTNF8P60827 252 aa11.92□□□□□ -0.5
COPB1-211ENST00000534234 ZNF496Q96IT1 587 aaPredicted RBP11.92□□□□□ -0.5
COPB1-211ENST00000534234 BCS1LQ9Y276 419 aa11.92□□□□□ -0.5
COPB1-211ENST00000534234 GOLGB1Q14789 3259 aaKnown RBP11.91□□□□□ -0.5
COPB1-211ENST00000534234 MRC1P22897 1456 aa11.91□□□□□ -0.5
COPB1-211ENST00000534234 GIGYF1O75420 1035 aaPredicted RBP11.91□□□□□ -0.5
COPB1-211ENST00000534234 CANXP27824 592 aaKnown RBP11.91□□□□□ -0.5
COPB1-211ENST00000534234 DDR1Q08345 913 aa11.91□□□□□ -0.5
COPB1-211ENST00000534234 TEX13AQ9BXU3 409 aaPredicted RBP11.91□□□□□ -0.5
COPB1-211ENST00000534234 NARFQ9UHQ1 456 aa11.91□□□□□ -0.5
COPB1-211ENST00000534234 PXDNLA1KZ92 1463 aa11.9□□□□□ -0.5
COPB1-211ENST00000534234 C10orf71Q711Q0 1435 aa11.9□□□□□ -0.5
COPB1-211ENST00000534234 CICQ96RK0 1608 aaPredicted RBP11.9□□□□□ -0.5
COPB1-211ENST00000534234 BTBD11A6QL63 1104 aa11.89□□□□□ -0.51
COPB1-211ENST00000534234 POLRMTO00411 1230 aaKnown RBP11.89□□□□□ -0.51
COPB1-211ENST00000534234 KCNA3P22001 575 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms