RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 TRIM35Q9UPQ4 493 aa12.42□□□□□ -0.42
CHKA-207ENST00000533728 FOXN1O15353 648 aa12.41□□□□□ -0.42
CHKA-207ENST00000533728 BCAR3O75815 825 aa12.41□□□□□ -0.42
CHKA-207ENST00000533728 ANP32EQ9BTT0 268 aa12.41□□□□□ -0.42
CHKA-207ENST00000533728 RRP7AQ9Y3A4 280 aaKnown RBP12.41□□□□□ -0.42
CHKA-207ENST00000533728 IL13P35225 146 aa12.4□□□□□ -0.42
CHKA-207ENST00000533728 BRPF1P55201 1214 aaPredicted RBP12.4□□□□□ -0.42
CHKA-207ENST00000533728 LMOD3Q0VAK6 560 aa12.4□□□□□ -0.42
CHKA-207ENST00000533728 NEUROD2Q15784 382 aa12.4□□□□□ -0.42
CHKA-207ENST00000533728 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.4□□□□□ -0.42
CHKA-207ENST00000533728 SLC16A10Q8TF71 515 aa12.4□□□□□ -0.42
CHKA-207ENST00000533728 BACH2Q9BYV9 841 aa12.4□□□□□ -0.42
CHKA-207ENST00000533728 PRDM11Q9NQV5 511 aa12.4□□□□□ -0.42
CHKA-207ENST00000533728 CACNA1FO60840 1977 aa12.39□□□□□ -0.43
CHKA-207ENST00000533728 TTC21BQ7Z4L5 1316 aa12.39□□□□□ -0.43
CHKA-207ENST00000533728 NFE2L2Q16236 605 aa12.39□□□□□ -0.43
CHKA-207ENST00000533728 KIF24Q5T7B8 1368 aa12.39□□□□□ -0.43
CHKA-207ENST00000533728 PIK3C2AO00443 1686 aa12.38□□□□□ -0.43
CHKA-207ENST00000533728 PAPPAQ13219 1627 aa12.38□□□□□ -0.43
CHKA-207ENST00000533728 PDE4AP27815 886 aa12.38□□□□□ -0.43
CHKA-207ENST00000533728 CANXP27824 592 aaKnown RBP12.38□□□□□ -0.43
CHKA-207ENST00000533728 ANP32AP39687 249 aaKnown RBP12.38□□□□□ -0.43
CHKA-207ENST00000533728 RIPK4P57078 832 aa12.38□□□□□ -0.43
CHKA-207ENST00000533728 ALDH1L2Q3SY69 923 aa12.38□□□□□ -0.43
CHKA-207ENST00000533728 NME9Q86XW9 330 aa12.38□□□□□ -0.43
CHKA-207ENST00000533728 CLUAP1Q96AJ1 413 aa12.38□□□□□ -0.43
CHKA-207ENST00000533728 ZKSCAN2Q63HK3 967 aa12.37□□□□□ -0.43
CHKA-207ENST00000533728 ACEP12821 1306 aa12.37□□□□□ -0.43
CHKA-207ENST00000533728 ADRA2BP18089 450 aa12.36□□□□□ -0.43
CHKA-207ENST00000533728 CTCFP49711 727 aaPredicted RBP12.36□□□□□ -0.43
CHKA-207ENST00000533728 QSER1Q2KHR3 1735 aa12.36□□□□□ -0.43
CHKA-207ENST00000533728 PHRF1Q9P1Y6 1649 aaKnown RBP12.36□□□□□ -0.43
CHKA-207ENST00000533728 KIF16BQ96L93 1317 aa12.36□□□□□ -0.43
CHKA-207ENST00000533728 MSH5O43196 834 aa12.35□□□□□ -0.43
CHKA-207ENST00000533728 PRKAR2BP31323 418 aa12.35□□□□□ -0.43
CHKA-207ENST00000533728 IPO8O15397 1037 aaKnown RBP12.34□□□□□ -0.43
CHKA-207ENST00000533728 GNAI1P63096 354 aa12.34□□□□□ -0.43
CHKA-207ENST00000533728 EXOSC9Q06265 439 aaKnown RBP12.34□□□□□ -0.43
CHKA-207ENST00000533728 IFT57Q9NWB7 429 aa12.34□□□□□ -0.43
CHKA-207ENST00000533728 EMILIN1Q9Y6C2 1016 aa12.34□□□□□ -0.43
CHKA-207ENST00000533728 ZNF853P0CG23 659 aa12.33□□□□□ -0.44
CHKA-207ENST00000533728 MVPQ14764 893 aaKnown RBP12.33□□□□□ -0.44
CHKA-207ENST00000533728 ZNF827Q17R98 1081 aa12.33□□□□□ -0.44
CHKA-207ENST00000533728 IPO9Q96P70 1041 aaKnown RBP12.33□□□□□ -0.44
CHKA-207ENST00000533728 CHMP4BQ9H444 224 aaKnown RBP12.33□□□□□ -0.44
CHKA-207ENST00000533728 DZIP1LQ8IYY4 767 aaKnown RBP12.32□□□□□ -0.44
CHKA-207ENST00000533728 NGDNQ8NEJ9 315 aaKnown RBP12.32□□□□□ -0.44
CHKA-207ENST00000533728 PANK1Q8TE04 598 aa12.32□□□□□ -0.44
CHKA-207ENST00000533728 ARHGAP45Q92619 1136 aa12.32□□□□□ -0.44
CHKA-207ENST00000533728 AIDAQ96BJ3 306 aa12.32□□□□□ -0.44
CHKA-207ENST00000533728 COG6Q9Y2V7 657 aa12.32□□□□□ -0.44
CHKA-207ENST00000533728 LTN1O94822 1766 aa12.32□□□□□ -0.44
CHKA-207ENST00000533728 A0A0C4DFX4 3053 aa12.32□□□□□ -0.44
CHKA-207ENST00000533728 EVA1CP58658 441 aa12.31□□□□□ -0.44
CHKA-207ENST00000533728 CHRNA2Q15822 529 aa12.31□□□□□ -0.44
CHKA-207ENST00000533728 PRPF38BQ5VTL8 546 aaKnown RBP12.31□□□□□ -0.44
CHKA-207ENST00000533728 SMC1BQ8NDV3 1235 aa12.31□□□□□ -0.44
CHKA-207ENST00000533728 CFAP44Q96MT7 982 aa12.31□□□□□ -0.44
CHKA-207ENST00000533728 DDX19BQ9UMR2 479 aa12.31□□□□□ -0.44
CHKA-207ENST00000533728 SLIT3O75094 1523 aa12.31□□□□□ -0.44
CHKA-207ENST00000533728 FLT4P35916 1363 aa12.3□□□□□ -0.44
CHKA-207ENST00000533728 LRRC37A3O60309 1634 aa12.3□□□□□ -0.44
CHKA-207ENST00000533728 LBX1P52954 281 aa12.3□□□□□ -0.44
CHKA-207ENST00000533728 ATF7IPQ6VMQ6 1270 aa12.3□□□□□ -0.44
CHKA-207ENST00000533728 ERICH6Q7L0X2 663 aa12.3□□□□□ -0.44
CHKA-207ENST00000533728 FRAT1Q92837 279 aaPredicted RBP12.3□□□□□ -0.44
CHKA-207ENST00000533728 TSR2Q969E8 191 aaKnown RBP12.3□□□□□ -0.44
CHKA-207ENST00000533728 RWDD1Q9H446 243 aaPredicted RBP12.3□□□□□ -0.44
CHKA-207ENST00000533728 SMC4Q9NTJ3 1288 aa12.3□□□□□ -0.44
CHKA-207ENST00000533728 NOP58Q9Y2X3 529 aaKnown RBP12.3□□□□□ -0.44
CHKA-207ENST00000533728 TUBGCP6Q96RT7 1819 aa12.3□□□□□ -0.44
CHKA-207ENST00000533728 KDRP35968 1356 aa12.3□□□□□ -0.44
CHKA-207ENST00000533728 KIAA0232Q92628 1395 aa12.3□□□□□ -0.44
CHKA-207ENST00000533728 CICQ96RK0 1608 aaPredicted RBP12.29□□□□□ -0.44
CHKA-207ENST00000533728 COL18A1P39060 1754 aa12.29□□□□□ -0.44
CHKA-207ENST00000533728 DLL1O00548 723 aa12.29□□□□□ -0.44
CHKA-207ENST00000533728 PPM1GO15355 546 aaPredicted RBP12.29□□□□□ -0.44
CHKA-207ENST00000533728 FTSJ3Q8IY81 847 aaKnown RBP12.29□□□□□ -0.44
CHKA-207ENST00000533728 SSH1Q8WYL5 1049 aa12.29□□□□□ -0.44
CHKA-207ENST00000533728 DDRGK1Q96HY6 314 aa12.29□□□□□ -0.44
CHKA-207ENST00000533728 THRAP3Q9Y2W1 955 aaKnown RBP12.29□□□□□ -0.44
CHKA-207ENST00000533728 N4BP2Q86UW6 1770 aaPredicted RBP12.28□□□□□ -0.44
CHKA-207ENST00000533728 IGHDP01880 384 aa12.28□□□□□ -0.44
CHKA-207ENST00000533728 RLBP1P12271 317 aa12.28□□□□□ -0.44
CHKA-207ENST00000533728 EIF4A2Q14240 407 aaKnown RBP12.28□□□□□ -0.44
CHKA-207ENST00000533728 LARP1Q6PKG0 1096 aaKnown RBP12.28□□□□□ -0.44
CHKA-207ENST00000533728 PHACTR3Q96KR7 559 aa12.28□□□□□ -0.44
CHKA-207ENST00000533728 CD2APQ9Y5K6 639 aa12.28□□□□□ -0.44
CHKA-207ENST00000533728 RTL1A6NKG5 1358 aa12.28□□□□□ -0.44
CHKA-207ENST00000533728 HMOX1P09601 288 aa12.27□□□□□ -0.45
CHKA-207ENST00000533728 TRIM27P14373 513 aa12.27□□□□□ -0.45
CHKA-207ENST00000533728 HDAC1Q13547 482 aaPredicted RBP12.27□□□□□ -0.45
CHKA-207ENST00000533728 RRS1Q15050 365 aaKnown RBP12.27□□□□□ -0.45
CHKA-207ENST00000533728 ABCC6O95255 1503 aa12.27□□□□□ -0.45
CHKA-207ENST00000533728 LMO7Q8WWI1 1683 aa12.26□□□□□ -0.45
CHKA-207ENST00000533728 RGPD5Q99666 1765 aa12.26□□□□□ -0.45
CHKA-207ENST00000533728 VAMP4O75379 141 aa12.26□□□□□ -0.45
CHKA-207ENST00000533728 FBLN1P23142 703 aa12.26□□□□□ -0.45
CHKA-207ENST00000533728 PNPLA7Q6ZV29 1317 aa12.26□□□□□ -0.45
CHKA-207ENST00000533728 BCL9O00512 1426 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms