RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 SSFA2P28290 1259 aa16.84■□□□□ 0.29
CAPRIN1-213ENST00000533562 CABP4P57796 275 aa16.84■□□□□ 0.29
CAPRIN1-213ENST00000533562 COL24A1Q17RW2 1714 aa16.84■□□□□ 0.29
CAPRIN1-213ENST00000533562 TAF1LQ8IZX4 1826 aa16.84■□□□□ 0.29
CAPRIN1-213ENST00000533562 PHF14O94880 888 aa16.83■□□□□ 0.28
CAPRIN1-213ENST00000533562 CC2D1BQ5T0F9 858 aaKnown RBP16.83■□□□□ 0.28
CAPRIN1-213ENST00000533562 LINC00116Q8NCU8 138 aa16.83■□□□□ 0.28
CAPRIN1-213ENST00000533562 C4BP0C0L5 1744 aa16.82■□□□□ 0.28
CAPRIN1-213ENST00000533562 ITPK1Q13572 414 aa16.82■□□□□ 0.28
CAPRIN1-213ENST00000533562 RBM42Q9BTD8 480 aaKnown RBP16.82■□□□□ 0.28
CAPRIN1-213ENST00000533562 KDRP35968 1356 aa16.81■□□□□ 0.28
CAPRIN1-213ENST00000533562 GNPATO15228 680 aa16.81■□□□□ 0.28
CAPRIN1-213ENST00000533562 KCNA4P22459 653 aa16.81■□□□□ 0.28
CAPRIN1-213ENST00000533562 PELP1Q8IZL8 1130 aaKnown RBP16.81■□□□□ 0.28
CAPRIN1-213ENST00000533562 NLGN2Q8NFZ4 835 aa16.81■□□□□ 0.28
CAPRIN1-213ENST00000533562 CD2APQ9Y5K6 639 aa16.81■□□□□ 0.28
CAPRIN1-213ENST00000533562 AMIGO3Q86WK7 504 aa16.8■□□□□ 0.28
CAPRIN1-213ENST00000533562 NFATC2IPQ8NCF5 419 aa16.8■□□□□ 0.28
CAPRIN1-213ENST00000533562 DIAPH1O60610 1272 aaKnown RBP16.79■□□□□ 0.28
CAPRIN1-213ENST00000533562 RTCBQ9Y3I0 505 aaKnown RBP16.79■□□□□ 0.28
CAPRIN1-213ENST00000533562 GRIN3BO60391 1043 aa16.78■□□□□ 0.28
CAPRIN1-213ENST00000533562 AKAP4Q5JQC9 854 aa16.78■□□□□ 0.28
CAPRIN1-213ENST00000533562 TRAPPC3LQ5T215 181 aa16.78■□□□□ 0.28
CAPRIN1-213ENST00000533562 RC3H1Q5TC82 1133 aaKnown RBP16.78■□□□□ 0.28
CAPRIN1-213ENST00000533562 SMIM5Q71RC9 77 aa16.78■□□□□ 0.28
CAPRIN1-213ENST00000533562 NPC1L1Q9UHC9 1359 aa16.77■□□□□ 0.28
CAPRIN1-213ENST00000533562 ZNF784Q8NCA9 323 aaPredicted RBP16.77■□□□□ 0.28
CAPRIN1-213ENST00000533562 SLC4A9Q96Q91 983 aa16.77■□□□□ 0.28
CAPRIN1-213ENST00000533562 KDM6AO15550 1401 aaPredicted RBP16.77■□□□□ 0.27
CAPRIN1-213ENST00000533562 CHD4Q14839 1912 aa16.76■□□□□ 0.27
CAPRIN1-213ENST00000533562 UBR3Q6ZT12 1888 aa16.76■□□□□ 0.27
CAPRIN1-213ENST00000533562 PTCD1O75127 700 aaKnown RBP16.76■□□□□ 0.27
CAPRIN1-213ENST00000533562 HMOX1P09601 288 aa16.76■□□□□ 0.27
CAPRIN1-213ENST00000533562 CNGB1Q14028 1251 aaPredicted RBP16.75■□□□□ 0.27
CAPRIN1-213ENST00000533562 RPS6KA4O75676 772 aa16.74■□□□□ 0.27
CAPRIN1-213ENST00000533562 NLGN1Q8N2Q7 840 aa16.74■□□□□ 0.27
CAPRIN1-213ENST00000533562 CNTNAP4Q9C0A0 1308 aa16.73■□□□□ 0.27
CAPRIN1-213ENST00000533562 RFC4P35249 363 aa16.73■□□□□ 0.27
CAPRIN1-213ENST00000533562 ARHGEF1Q92888 912 aaKnown RBP16.73■□□□□ 0.27
CAPRIN1-213ENST00000533562 SLC52A2Q9HAB3 445 aa16.73■□□□□ 0.27
CAPRIN1-213ENST00000533562 YBX3P16989 372 aaKnown RBP eCLIP16.72■□□□□ 0.27
CAPRIN1-213ENST00000533562 LGR6Q9HBX8 967 aa16.72■□□□□ 0.27
CAPRIN1-213ENST00000533562 ZNF831Q5JPB2 1677 aa16.72■□□□□ 0.27
CAPRIN1-213ENST00000533562 U2SURPO15042 1029 aaKnown RBP16.71■□□□□ 0.27
CAPRIN1-213ENST00000533562 RNMTO43148 476 aaKnown RBP16.71■□□□□ 0.27
CAPRIN1-213ENST00000533562 MMP10P09238 476 aa16.71■□□□□ 0.27
CAPRIN1-213ENST00000533562 MTHFSDQ2M296 383 aaKnown RBP16.71■□□□□ 0.27
CAPRIN1-213ENST00000533562 CRKLP46109 303 aaKnown RBP16.69■□□□□ 0.26
CAPRIN1-213ENST00000533562 CFAP53Q96M91 514 aa16.69■□□□□ 0.26
CAPRIN1-213ENST00000533562 SCN11AQ9UI33 1791 aa16.67■□□□□ 0.26
CAPRIN1-213ENST00000533562 GYS1P13807 737 aa16.67■□□□□ 0.26
CAPRIN1-213ENST00000533562 GAS2L2Q8NHY3 880 aa16.67■□□□□ 0.26
CAPRIN1-213ENST00000533562 TGFB2P61812 414 aa16.66■□□□□ 0.26
CAPRIN1-213ENST00000533562 SLC39A6Q13433 755 aa16.66■□□□□ 0.26
CAPRIN1-213ENST00000533562 NUDCQ9Y266 331 aa16.66■□□□□ 0.26
CAPRIN1-213ENST00000533562 PARP3Q9Y6F1 533 aa16.66■□□□□ 0.26
CAPRIN1-213ENST00000533562 GNAT3A8MTJ3 354 aa16.65■□□□□ 0.26
CAPRIN1-213ENST00000533562 INTS5Q6P9B9 1019 aaKnown RBP16.65■□□□□ 0.26
CAPRIN1-213ENST00000533562 DNAJC10Q8IXB1 793 aa16.65■□□□□ 0.26
CAPRIN1-213ENST00000533562 CCDC87Q9NVE4 849 aa16.65■□□□□ 0.26
CAPRIN1-213ENST00000533562 MYH14Q7Z406 1995 aaKnown RBP16.65■□□□□ 0.26
CAPRIN1-213ENST00000533562 COL5A3P25940 1745 aaPredicted RBP16.65■□□□□ 0.26
CAPRIN1-213ENST00000533562 TTC5Q8N0Z6 440 aa16.64■□□□□ 0.25
CAPRIN1-213ENST00000533562 VSIG10Q8N0Z9 540 aa16.64■□□□□ 0.25
CAPRIN1-213ENST00000533562 ZPR1O75312 459 aa16.63■□□□□ 0.25
CAPRIN1-213ENST00000533562 TEFQ10587 303 aa16.63■□□□□ 0.25
CAPRIN1-213ENST00000533562 COL3A1P02461 1466 aaPredicted RBP16.62■□□□□ 0.25
CAPRIN1-213ENST00000533562 CYP19A1P11511 503 aaPredicted RBP16.62■□□□□ 0.25
CAPRIN1-213ENST00000533562 WWC3Q9ULE0 1092 aa16.62■□□□□ 0.25
CAPRIN1-213ENST00000533562 USP42Q9H9J4 1324 aaKnown RBP16.62■□□□□ 0.25
CAPRIN1-213ENST00000533562 MRC1P22897 1456 aa16.61■□□□□ 0.25
CAPRIN1-213ENST00000533562 STARD3NLO95772 234 aa16.61■□□□□ 0.25
CAPRIN1-213ENST00000533562 PPP2R1AP30153 589 aa16.61■□□□□ 0.25
CAPRIN1-213ENST00000533562 IL17REQ8NFR9 667 aa16.61■□□□□ 0.25
CAPRIN1-213ENST00000533562 SRP68Q9UHB9 627 aaKnown RBP16.61■□□□□ 0.25
CAPRIN1-213ENST00000533562 A0A0G2JLW4 131 aa16.6■□□□□ 0.25
CAPRIN1-213ENST00000533562 U2AF1L5P0DN76 240 aaPredicted RBP16.6■□□□□ 0.25
CAPRIN1-213ENST00000533562 PRKAR2BP31323 418 aa16.6■□□□□ 0.25
CAPRIN1-213ENST00000533562 U2AF1Q01081 240 aaKnown RBP eCLIP16.6■□□□□ 0.25
CAPRIN1-213ENST00000533562 FKBP8Q14318 412 aa16.6■□□□□ 0.25
CAPRIN1-213ENST00000533562 TEX13AQ9BXU3 409 aaPredicted RBP16.6■□□□□ 0.25
CAPRIN1-213ENST00000533562 GIGYF1O75420 1035 aaPredicted RBP16.59■□□□□ 0.25
CAPRIN1-213ENST00000533562 FCHSD2O94868 740 aa16.59■□□□□ 0.25
CAPRIN1-213ENST00000533562 C1QTNF8P60827 252 aa16.59■□□□□ 0.25
CAPRIN1-213ENST00000533562 ZNF790Q6PG37 636 aa16.59■□□□□ 0.25
CAPRIN1-213ENST00000533562 PHACTR3Q96KR7 559 aa16.59■□□□□ 0.25
CAPRIN1-213ENST00000533562 RSPH6AQ9H0K4 717 aa16.59■□□□□ 0.25
CAPRIN1-213ENST00000533562 SOS1Q07889 1333 aaPredicted RBP16.59■□□□□ 0.25
CAPRIN1-213ENST00000533562 CICQ96RK0 1608 aaPredicted RBP16.59■□□□□ 0.25
CAPRIN1-213ENST00000533562 USPL1Q5W0Q7 1092 aa16.58■□□□□ 0.24
CAPRIN1-213ENST00000533562 NARFQ9UHQ1 456 aa16.58■□□□□ 0.24
CAPRIN1-213ENST00000533562 BCS1LQ9Y276 419 aa16.58■□□□□ 0.24
CAPRIN1-213ENST00000533562 TJP1Q07157 1748 aa16.57■□□□□ 0.24
CAPRIN1-213ENST00000533562 ADAMTS7Q9UKP4 1686 aa16.57■□□□□ 0.24
CAPRIN1-213ENST00000533562 C10orf71Q711Q0 1435 aa16.57■□□□□ 0.24
CAPRIN1-213ENST00000533562 DPEP1P16444 411 aa16.57■□□□□ 0.24
CAPRIN1-213ENST00000533562 TM4SF1P30408 202 aa16.57■□□□□ 0.24
CAPRIN1-213ENST00000533562 RTF1Q92541 710 aaKnown RBP16.57■□□□□ 0.24
CAPRIN1-213ENST00000533562 ZBTB1Q9Y2K1 713 aa16.57■□□□□ 0.24
CAPRIN1-213ENST00000533562 VIRMAQ69YN4 1812 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms