RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 UBR3Q6ZT12 1888 aa29.99■■■□□ 2.39
BEST1-207ENST00000533521 ADAMTS7Q9UKP4 1686 aa29.97■■■□□ 2.39
BEST1-207ENST00000533521 POLD1P28340 1107 aa29.96■■■□□ 2.39
BEST1-207ENST00000533521 AK7Q96M32 723 aa29.96■■■□□ 2.39
BEST1-207ENST00000533521 PPP2R1AP30153 589 aa29.95■■■□□ 2.39
BEST1-207ENST00000533521 ATP6V1AP38606 617 aa29.95■■■□□ 2.39
BEST1-207ENST00000533521 SSFA2P28290 1259 aa29.94■■■□□ 2.38
BEST1-207ENST00000533521 FHDC1Q9C0D6 1143 aaPredicted RBP29.94■■■□□ 2.38
BEST1-207ENST00000533521 MRC1P22897 1456 aa29.93■■■□□ 2.38
BEST1-207ENST00000533521 ITPK1Q13572 414 aa29.93■■■□□ 2.38
BEST1-207ENST00000533521 NFATC2IPQ8NCF5 419 aa29.93■■■□□ 2.38
BEST1-207ENST00000533521 LINC00116Q8NCU8 138 aa29.93■■■□□ 2.38
BEST1-207ENST00000533521 SYT17Q9BSW7 474 aa29.93■■■□□ 2.38
BEST1-207ENST00000533521 VIRMAQ69YN4 1812 aaKnown RBP29.93■■■□□ 2.38
BEST1-207ENST00000533521 DCAF8L1A6NGE4 600 aa29.92■■■□□ 2.38
BEST1-207ENST00000533521 CNGB1Q14028 1251 aaPredicted RBP29.92■■■□□ 2.38
BEST1-207ENST00000533521 MTHFSDQ2M296 383 aaKnown RBP29.92■■■□□ 2.38
BEST1-207ENST00000533521 NUDCQ9Y266 331 aa29.92■■■□□ 2.38
BEST1-207ENST00000533521 CICQ96RK0 1608 aaPredicted RBP29.92■■■□□ 2.38
BEST1-207ENST00000533521 U2SURPO15042 1029 aaKnown RBP29.91■■■□□ 2.38
BEST1-207ENST00000533521 RC3H1Q5TC82 1133 aaKnown RBP29.91■■■□□ 2.38
BEST1-207ENST00000533521 SLC52A2Q9HAB3 445 aa29.9■■■□□ 2.38
BEST1-207ENST00000533521 COL5A3P25940 1745 aaPredicted RBP29.9■■■□□ 2.38
BEST1-207ENST00000533521 RNMTO43148 476 aaKnown RBP29.89■■■□□ 2.38
BEST1-207ENST00000533521 MSH5O43196 834 aa29.89■■■□□ 2.38
BEST1-207ENST00000533521 GAS2L2Q8NHY3 880 aa29.89■■■□□ 2.38
BEST1-207ENST00000533521 SLC4A9Q96Q91 983 aa29.89■■■□□ 2.38
BEST1-207ENST00000533521 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.87■■■□□ 2.37
BEST1-207ENST00000533521 RBM42Q9BTD8 480 aaKnown RBP29.87■■■□□ 2.37
BEST1-207ENST00000533521 CNTNAP4Q9C0A0 1308 aa29.87■■■□□ 2.37
BEST1-207ENST00000533521 LGR6Q9HBX8 967 aa29.86■■■□□ 2.37
BEST1-207ENST00000533521 ADRA2BP18089 450 aa29.84■■■□□ 2.37
BEST1-207ENST00000533521 AMIGO3Q86WK7 504 aa29.84■■■□□ 2.37
BEST1-207ENST00000533521 RSPH6AQ9H0K4 717 aa29.84■■■□□ 2.37
BEST1-207ENST00000533521 GNPATO15228 680 aa29.83■■■□□ 2.37
BEST1-207ENST00000533521 FCHSD2O94868 740 aa29.83■■■□□ 2.37
BEST1-207ENST00000533521 RTCBQ9Y3I0 505 aaKnown RBP29.82■■■□□ 2.36
BEST1-207ENST00000533521 GNAT3A8MTJ3 354 aa29.81■■■□□ 2.36
BEST1-207ENST00000533521 PTCD1O75127 700 aaKnown RBP29.8■■■□□ 2.36
BEST1-207ENST00000533521 MYH14Q7Z406 1995 aaKnown RBP29.79■■■□□ 2.36
BEST1-207ENST00000533521 RPS6KA4O75676 772 aa29.79■■■□□ 2.36
BEST1-207ENST00000533521 TJP1Q07157 1748 aa29.79■■■□□ 2.36
BEST1-207ENST00000533521 PHF14O94880 888 aa29.78■■■□□ 2.36
BEST1-207ENST00000533521 U2AF1L5P0DN76 240 aaPredicted RBP29.78■■■□□ 2.36
BEST1-207ENST00000533521 PRKAR2BP31323 418 aa29.78■■■□□ 2.36
BEST1-207ENST00000533521 U2AF1Q01081 240 aaKnown RBP eCLIP29.78■■■□□ 2.36
BEST1-207ENST00000533521 TRAPPC3LQ5T215 181 aa29.77■■■□□ 2.36
BEST1-207ENST00000533521 MSL1Q68DK7 614 aa29.76■■■□□ 2.35
BEST1-207ENST00000533521 VSIG10Q8N0Z9 540 aa29.76■■■□□ 2.35
BEST1-207ENST00000533521 CEMIPQ8WUJ3 1361 aa29.76■■■□□ 2.35
BEST1-207ENST00000533521 SIPA1L3O60292 1781 aaPredicted RBP29.75■■■□□ 2.35
BEST1-207ENST00000533521 UBR2Q8IWV8 1755 aa29.75■■■□□ 2.35
BEST1-207ENST00000533521 RALBP1Q15311 655 aa29.75■■■□□ 2.35
BEST1-207ENST00000533521 IL17REQ8NFR9 667 aa29.75■■■□□ 2.35
BEST1-207ENST00000533521 PHACTR3Q96KR7 559 aa29.75■■■□□ 2.35
BEST1-207ENST00000533521 CD2APQ9Y5K6 639 aa29.75■■■□□ 2.35
BEST1-207ENST00000533521 KCPQ6ZWJ8 1503 aa29.74■■■□□ 2.35
BEST1-207ENST00000533521 CRKLP46109 303 aaKnown RBP29.73■■■□□ 2.35
BEST1-207ENST00000533521 TEFQ10587 303 aa29.72■■■□□ 2.35
BEST1-207ENST00000533521 SMIM5Q71RC9 77 aa29.71■■■□□ 2.35
BEST1-207ENST00000533521 NLGN1Q8N2Q7 840 aa29.71■■■□□ 2.35
BEST1-207ENST00000533521 ARHGEF1Q92888 912 aaKnown RBP29.71■■■□□ 2.35
BEST1-207ENST00000533521 HTATSF1O43719 755 aaKnown RBP29.7■■■□□ 2.35
BEST1-207ENST00000533521 SLC39A6Q13433 755 aa29.69■■■□□ 2.34
BEST1-207ENST00000533521 C4AP0C0L4 1744 aa29.68■■■□□ 2.34
BEST1-207ENST00000533521 RFC4P35249 363 aa29.68■■■□□ 2.34
BEST1-207ENST00000533521 ZEB1P37275 1124 aaPredicted RBP29.68■■■□□ 2.34
BEST1-207ENST00000533521 INTS5Q6P9B9 1019 aaKnown RBP29.68■■■□□ 2.34
BEST1-207ENST00000533521 CYP19A1P11511 503 aaPredicted RBP29.67■■■□□ 2.34
BEST1-207ENST00000533521 DDX10Q13206 875 aaKnown RBP29.67■■■□□ 2.34
BEST1-207ENST00000533521 DNAJC10Q8IXB1 793 aa29.67■■■□□ 2.34
BEST1-207ENST00000533521 ZNF790Q6PG37 636 aa29.66■■■□□ 2.34
BEST1-207ENST00000533521 TTC5Q8N0Z6 440 aa29.66■■■□□ 2.34
BEST1-207ENST00000533521 KLHL34Q8N239 644 aa29.66■■■□□ 2.34
BEST1-207ENST00000533521 CCDC87Q9NVE4 849 aa29.66■■■□□ 2.34
BEST1-207ENST00000533521 CHD4Q14839 1912 aa29.65■■■□□ 2.34
BEST1-207ENST00000533521 PNNQ9H307 717 aaKnown RBP29.65■■■□□ 2.34
BEST1-207ENST00000533521 NLGN2Q8NFZ4 835 aa29.64■■■□□ 2.34
BEST1-207ENST00000533521 TEX13AQ9BXU3 409 aaPredicted RBP29.64■■■□□ 2.34
BEST1-207ENST00000533521 NEFMP07197 916 aa29.63■■■□□ 2.33
BEST1-207ENST00000533521 GYS1P13807 737 aa29.63■■■□□ 2.33
BEST1-207ENST00000533521 YY1P25490 414 aa29.63■■■□□ 2.33
BEST1-207ENST00000533521 RTF1Q92541 710 aaKnown RBP29.63■■■□□ 2.33
BEST1-207ENST00000533521 MMP10P09238 476 aa29.61■■■□□ 2.33
BEST1-207ENST00000533521 GPR162Q16538 588 aa29.61■■■□□ 2.33
BEST1-207ENST00000533521 SOS1Q07889 1333 aaPredicted RBP29.61■■■□□ 2.33
BEST1-207ENST00000533521 USP42Q9H9J4 1324 aaKnown RBP29.61■■■□□ 2.33
BEST1-207ENST00000533521 KIF13BQ9NQT8 1826 aa29.61■■■□□ 2.33
BEST1-207ENST00000533521 HEG1Q9ULI3 1381 aa29.61■■■□□ 2.33
BEST1-207ENST00000533521 STARD3NLO95772 234 aa29.6■■■□□ 2.33
BEST1-207ENST00000533521 PLEKHF1Q96S99 279 aa29.6■■■□□ 2.33
BEST1-207ENST00000533521 ZNF496Q96IT1 587 aaPredicted RBP29.59■■■□□ 2.33
BEST1-207ENST00000533521 MYBBP1AQ9BQG0 1328 aaKnown RBP29.59■■■□□ 2.33
BEST1-207ENST00000533521 FMNL2Q96PY5 1086 aa29.58■■■□□ 2.33
BEST1-207ENST00000533521 BTBD11A6QL63 1104 aa29.57■■■□□ 2.32
BEST1-207ENST00000533521 DLG5Q8TDM6 1919 aa29.56■■■□□ 2.32
BEST1-207ENST00000533521 GRIN3BO60391 1043 aa29.56■■■□□ 2.32
BEST1-207ENST00000533521 ZBTB1Q9Y2K1 713 aa29.54■■■□□ 2.32
BEST1-207ENST00000533521 MCM10Q7L590 875 aa29.53■■■□□ 2.32
BEST1-207ENST00000533521 NARFQ9UHQ1 456 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms