RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 HSP90AB1P08238 724 aaKnown RBP25.72■■□□□ 1.71
SSH3-209ENST00000532600 POLD1P28340 1107 aa25.72■■□□□ 1.71
SSH3-209ENST00000532600 ZNF831Q5JPB2 1677 aa25.71■■□□□ 1.71
SSH3-209ENST00000532600 SCN11AQ9UI33 1791 aa25.7■■□□□ 1.7
SSH3-209ENST00000532600 CNGB1Q14028 1251 aaPredicted RBP25.7■■□□□ 1.7
SSH3-209ENST00000532600 AK7Q96M32 723 aa25.7■■□□□ 1.7
SSH3-209ENST00000532600 HMOX1P09601 288 aa25.69■■□□□ 1.7
SSH3-209ENST00000532600 ATP6V1AP38606 617 aa25.69■■□□□ 1.7
SSH3-209ENST00000532600 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.68■■□□□ 1.7
SSH3-209ENST00000532600 FLAD1Q8NFF5 587 aa25.68■■□□□ 1.7
SSH3-209ENST00000532600 COL5A3P25940 1745 aaPredicted RBP25.68■■□□□ 1.7
SSH3-209ENST00000532600 DIAPH1O60610 1272 aaKnown RBP25.67■■□□□ 1.7
SSH3-209ENST00000532600 PHF14O94880 888 aa25.67■■□□□ 1.7
SSH3-209ENST00000532600 YY1P25490 414 aa25.67■■□□□ 1.7
SSH3-209ENST00000532600 HMGB2P26583 209 aaKnown RBP25.67■■□□□ 1.7
SSH3-209ENST00000532600 C1orf141Q5JVX7 400 aa25.67■■□□□ 1.7
SSH3-209ENST00000532600 NLGN2Q8NFZ4 835 aa25.67■■□□□ 1.7
SSH3-209ENST00000532600 DCAF8L1A6NGE4 600 aa25.66■■□□□ 1.7
SSH3-209ENST00000532600 CABP4P57796 275 aa25.66■■□□□ 1.7
SSH3-209ENST00000532600 KLHL34Q8N239 644 aa25.66■■□□□ 1.7
SSH3-209ENST00000532600 UTRNP46939 3433 aa25.66■■□□□ 1.7
SSH3-209ENST00000532600 NFATC2IPQ8NCF5 419 aa25.65■■□□□ 1.7
SSH3-209ENST00000532600 SSFA2P28290 1259 aa25.64■■□□□ 1.7
SSH3-209ENST00000532600 ADAMTS7Q9UKP4 1686 aa25.64■■□□□ 1.69
SSH3-209ENST00000532600 VIRMAQ69YN4 1812 aaKnown RBP25.63■■□□□ 1.69
SSH3-209ENST00000532600 GNPATO15228 680 aa25.63■■□□□ 1.69
SSH3-209ENST00000532600 AKAP4Q5JQC9 854 aa25.63■■□□□ 1.69
SSH3-209ENST00000532600 RBM42Q9BTD8 480 aaKnown RBP25.63■■□□□ 1.69
SSH3-209ENST00000532600 LGR6Q9HBX8 967 aa25.63■■□□□ 1.69
SSH3-209ENST00000532600 MTHFSDQ2M296 383 aaKnown RBP25.62■■□□□ 1.69
SSH3-209ENST00000532600 MRC1P22897 1456 aa25.61■■□□□ 1.69
SSH3-209ENST00000532600 TJP1Q07157 1748 aa25.61■■□□□ 1.69
SSH3-209ENST00000532600 MYH14Q7Z406 1995 aaKnown RBP25.61■■□□□ 1.69
SSH3-209ENST00000532600 CICQ96RK0 1608 aaPredicted RBP25.59■■□□□ 1.69
SSH3-209ENST00000532600 RNMTO43148 476 aaKnown RBP25.58■■□□□ 1.69
SSH3-209ENST00000532600 PTCD1O75127 700 aaKnown RBP25.58■■□□□ 1.69
SSH3-209ENST00000532600 RC3H1Q5TC82 1133 aaKnown RBP25.57■■□□□ 1.68
SSH3-209ENST00000532600 SLC52A2Q9HAB3 445 aa25.57■■□□□ 1.68
SSH3-209ENST00000532600 CNTNAP4Q9C0A0 1308 aa25.57■■□□□ 1.68
SSH3-209ENST00000532600 U2SURPO15042 1029 aaKnown RBP25.54■■□□□ 1.68
SSH3-209ENST00000532600 GPR162Q16538 588 aa25.54■■□□□ 1.68
SSH3-209ENST00000532600 CHD4Q14839 1912 aa25.54■■□□□ 1.68
SSH3-209ENST00000532600 C4AP0C0L4 1744 aa25.54■■□□□ 1.68
SSH3-209ENST00000532600 KCPQ6ZWJ8 1503 aa25.53■■□□□ 1.68
SSH3-209ENST00000532600 GOLGB1Q14789 3259 aaKnown RBP25.53■■□□□ 1.68
SSH3-209ENST00000532600 PPP2R1AP30153 589 aa25.53■■□□□ 1.68
SSH3-209ENST00000532600 RTCBQ9Y3I0 505 aaKnown RBP25.53■■□□□ 1.68
SSH3-209ENST00000532600 CD2APQ9Y5K6 639 aa25.53■■□□□ 1.68
SSH3-209ENST00000532600 RPS6KA4O75676 772 aa25.52■■□□□ 1.68
SSH3-209ENST00000532600 YBX3P16989 372 aaKnown RBP eCLIP25.52■■□□□ 1.68
SSH3-209ENST00000532600 SLC39A6Q13433 755 aa25.52■■□□□ 1.68
SSH3-209ENST00000532600 ARHGEF1Q92888 912 aaKnown RBP25.52■■□□□ 1.68
SSH3-209ENST00000532600 TRAPPC3LQ5T215 181 aa25.51■■□□□ 1.67
SSH3-209ENST00000532600 CRKLP46109 303 aaKnown RBP25.5■■□□□ 1.67
SSH3-209ENST00000532600 PELP1Q8IZL8 1130 aaKnown RBP25.49■■□□□ 1.67
SSH3-209ENST00000532600 PHACTR3Q96KR7 559 aa25.49■■□□□ 1.67
SSH3-209ENST00000532600 UBR2Q8IWV8 1755 aa25.49■■□□□ 1.67
SSH3-209ENST00000532600 ADRA2BP18089 450 aa25.48■■□□□ 1.67
SSH3-209ENST00000532600 INTS5Q6P9B9 1019 aaKnown RBP25.48■■□□□ 1.67
SSH3-209ENST00000532600 DNAJC10Q8IXB1 793 aa25.48■■□□□ 1.67
SSH3-209ENST00000532600 RSPH6AQ9H0K4 717 aa25.48■■□□□ 1.67
SSH3-209ENST00000532600 SIPA1L3O60292 1781 aaPredicted RBP25.48■■□□□ 1.67
SSH3-209ENST00000532600 MMP10P09238 476 aa25.47■■□□□ 1.67
SSH3-209ENST00000532600 GYS1P13807 737 aa25.47■■□□□ 1.67
SSH3-209ENST00000532600 IL17REQ8NFR9 667 aa25.47■■□□□ 1.67
SSH3-209ENST00000532600 KIAA1551Q9HCM1 1747 aa25.46■■□□□ 1.67
SSH3-209ENST00000532600 PRKAR2BP31323 418 aa25.45■■□□□ 1.66
SSH3-209ENST00000532600 ZNF784Q8NCA9 323 aaPredicted RBP25.45■■□□□ 1.66
SSH3-209ENST00000532600 CFAP53Q96M91 514 aa25.45■■□□□ 1.66
SSH3-209ENST00000532600 KIF13BQ9NQT8 1826 aa25.44■■□□□ 1.66
SSH3-209ENST00000532600 CYP19A1P11511 503 aaPredicted RBP25.43■■□□□ 1.66
SSH3-209ENST00000532600 GAS2L2Q8NHY3 880 aa25.43■■□□□ 1.66
SSH3-209ENST00000532600 SRP68Q9UHB9 627 aaKnown RBP25.43■■□□□ 1.66
SSH3-209ENST00000532600 GNAT3A8MTJ3 354 aa25.42■■□□□ 1.66
SSH3-209ENST00000532600 RFC4P35249 363 aa25.42■■□□□ 1.66
SSH3-209ENST00000532600 NLGN1Q8N2Q7 840 aa25.42■■□□□ 1.66
SSH3-209ENST00000532600 CEMIPQ8WUJ3 1361 aa25.41■■□□□ 1.66
SSH3-209ENST00000532600 USP42Q9H9J4 1324 aaKnown RBP25.4■■□□□ 1.66
SSH3-209ENST00000532600 CCDC87Q9NVE4 849 aa25.4■■□□□ 1.66
SSH3-209ENST00000532600 SOS1Q07889 1333 aaPredicted RBP25.39■■□□□ 1.66
SSH3-209ENST00000532600 C10orf71Q711Q0 1435 aa25.39■■□□□ 1.66
SSH3-209ENST00000532600 U2AF1L5P0DN76 240 aaPredicted RBP25.39■■□□□ 1.66
SSH3-209ENST00000532600 U2AF1Q01081 240 aaKnown RBP eCLIP25.39■■□□□ 1.66
SSH3-209ENST00000532600 PXDNLA1KZ92 1463 aa25.39■■□□□ 1.65
SSH3-209ENST00000532600 FKBP8Q14318 412 aa25.38■■□□□ 1.65
SSH3-209ENST00000532600 WWC3Q9ULE0 1092 aa25.38■■□□□ 1.65
SSH3-209ENST00000532600 NUDCQ9Y266 331 aa25.38■■□□□ 1.65
SSH3-209ENST00000532600 N4BP2Q86UW6 1770 aaPredicted RBP25.37■■□□□ 1.65
SSH3-209ENST00000532600 GRIN3BO60391 1043 aa25.37■■□□□ 1.65
SSH3-209ENST00000532600 VSIG10Q8N0Z9 540 aa25.37■■□□□ 1.65
SSH3-209ENST00000532600 ZBTB1Q9Y2K1 713 aa25.37■■□□□ 1.65
SSH3-209ENST00000532600 ZNF496Q96IT1 587 aaPredicted RBP25.36■■□□□ 1.65
SSH3-209ENST00000532600 FCHSD2O94868 740 aa25.35■■□□□ 1.65
SSH3-209ENST00000532600 DDR1Q08345 913 aa25.35■■□□□ 1.65
SSH3-209ENST00000532600 KCNQ3O43525 872 aa25.34■■□□□ 1.65
SSH3-209ENST00000532600 TEFQ10587 303 aa25.34■■□□□ 1.65
SSH3-209ENST00000532600 ZNF790Q6PG37 636 aa25.34■■□□□ 1.65
SSH3-209ENST00000532600 USPL1Q5W0Q7 1092 aa25.32■■□□□ 1.64
SSH3-209ENST00000532600 TTC5Q8N0Z6 440 aa25.32■■□□□ 1.64
SSH3-209ENST00000532600 COL15A1P39059 1388 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms