RNA–Protein interactions for RNA: ENST00000532465.1

LMNB2-205, Transcript of lamin B2, humanhuman

TSL 3

Gene LMNB2, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-205ENST00000532465 ATP6V1AP38606 617 aa25.19■■□□□ 1.62
LMNB2-205ENST00000532465 AKAP4Q5JQC9 854 aa25.19■■□□□ 1.62
LMNB2-205ENST00000532465 AMIGO3Q86WK7 504 aa25.19■■□□□ 1.62
LMNB2-205ENST00000532465 COL24A1Q17RW2 1714 aa25.18■■□□□ 1.62
LMNB2-205ENST00000532465 PPP2R1AP30153 589 aa25.17■■□□□ 1.62
LMNB2-205ENST00000532465 MTHFSDQ2M296 383 aaKnown RBP25.17■■□□□ 1.62
LMNB2-205ENST00000532465 SMIM5Q71RC9 77 aa25.17■■□□□ 1.62
LMNB2-205ENST00000532465 RBM42Q9BTD8 480 aaKnown RBP25.17■■□□□ 1.62
LMNB2-205ENST00000532465 SCN11AQ9UI33 1791 aa25.17■■□□□ 1.62
LMNB2-205ENST00000532465 POLD1P28340 1107 aa25.16■■□□□ 1.62
LMNB2-205ENST00000532465 NFATC2IPQ8NCF5 419 aa25.16■■□□□ 1.62
LMNB2-205ENST00000532465 SLC4A9Q96Q91 983 aa25.16■■□□□ 1.62
LMNB2-205ENST00000532465 SYT17Q9BSW7 474 aa25.16■■□□□ 1.62
LMNB2-205ENST00000532465 UBR3Q6ZT12 1888 aa25.15■■□□□ 1.62
LMNB2-205ENST00000532465 PHF14O94880 888 aa25.15■■□□□ 1.62
LMNB2-205ENST00000532465 FLAD1Q8NFF5 587 aa25.15■■□□□ 1.62
LMNB2-205ENST00000532465 CFAP53Q96M91 514 aa25.15■■□□□ 1.62
LMNB2-205ENST00000532465 LGR6Q9HBX8 967 aa25.15■■□□□ 1.62
LMNB2-205ENST00000532465 MSL1Q68DK7 614 aa25.14■■□□□ 1.62
LMNB2-205ENST00000532465 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.12■■□□□ 1.61
LMNB2-205ENST00000532465 RNMTO43148 476 aaKnown RBP25.12■■□□□ 1.61
LMNB2-205ENST00000532465 GNPATO15228 680 aa25.11■■□□□ 1.61
LMNB2-205ENST00000532465 ZNF831Q5JPB2 1677 aa25.1■■□□□ 1.61
LMNB2-205ENST00000532465 MAP3K5Q99683 1374 aa25.1■■□□□ 1.61
LMNB2-205ENST00000532465 PTCD1O75127 700 aaKnown RBP25.1■■□□□ 1.61
LMNB2-205ENST00000532465 KLHL34Q8N239 644 aa25.1■■□□□ 1.61
LMNB2-205ENST00000532465 SLC52A2Q9HAB3 445 aa25.1■■□□□ 1.61
LMNB2-205ENST00000532465 VIRMAQ69YN4 1812 aaKnown RBP25.09■■□□□ 1.61
LMNB2-205ENST00000532465 MRC1P22897 1456 aa25.09■■□□□ 1.61
LMNB2-205ENST00000532465 SSFA2P28290 1259 aa25.09■■□□□ 1.61
LMNB2-205ENST00000532465 ADAMTS7Q9UKP4 1686 aa25.08■■□□□ 1.61
LMNB2-205ENST00000532465 COL5A3P25940 1745 aaPredicted RBP25.07■■□□□ 1.6
LMNB2-205ENST00000532465 DCAF8L1A6NGE4 600 aa25.07■■□□□ 1.6
LMNB2-205ENST00000532465 RSPH6AQ9H0K4 717 aa25.07■■□□□ 1.6
LMNB2-205ENST00000532465 NUDCQ9Y266 331 aa25.07■■□□□ 1.6
LMNB2-205ENST00000532465 PRKAR2BP31323 418 aa25.06■■□□□ 1.6
LMNB2-205ENST00000532465 GAS2L2Q8NHY3 880 aa25.05■■□□□ 1.6
LMNB2-205ENST00000532465 U2AF1L5P0DN76 240 aaPredicted RBP25.04■■□□□ 1.6
LMNB2-205ENST00000532465 U2AF1Q01081 240 aaKnown RBP eCLIP25.04■■□□□ 1.6
LMNB2-205ENST00000532465 SLC39A6Q13433 755 aa25.04■■□□□ 1.6
LMNB2-205ENST00000532465 PHACTR3Q96KR7 559 aa25.04■■□□□ 1.6
LMNB2-205ENST00000532465 CNTNAP4Q9C0A0 1308 aa25.04■■□□□ 1.6
LMNB2-205ENST00000532465 RC3H1Q5TC82 1133 aaKnown RBP25.03■■□□□ 1.6
LMNB2-205ENST00000532465 RTCBQ9Y3I0 505 aaKnown RBP25.03■■□□□ 1.6
LMNB2-205ENST00000532465 TJP1Q07157 1748 aa25.03■■□□□ 1.6
LMNB2-205ENST00000532465 GNAT3A8MTJ3 354 aa25.02■■□□□ 1.6
LMNB2-205ENST00000532465 MYH14Q7Z406 1995 aaKnown RBP25.02■■□□□ 1.6
LMNB2-205ENST00000532465 IL17REQ8NFR9 667 aa25.01■■□□□ 1.59
LMNB2-205ENST00000532465 NLGN2Q8NFZ4 835 aa25.01■■□□□ 1.59
LMNB2-205ENST00000532465 DDX10Q13206 875 aaKnown RBP25■■□□□ 1.59
LMNB2-205ENST00000532465 CICQ96RK0 1608 aaPredicted RBP25■■□□□ 1.59
LMNB2-205ENST00000532465 RPS6KA4O75676 772 aa24.99■■□□□ 1.59
LMNB2-205ENST00000532465 CRKLP46109 303 aaKnown RBP24.99■■□□□ 1.59
LMNB2-205ENST00000532465 TRAPPC3LQ5T215 181 aa24.99■■□□□ 1.59
LMNB2-205ENST00000532465 KCPQ6ZWJ8 1503 aa24.99■■□□□ 1.59
LMNB2-205ENST00000532465 DNAJC10Q8IXB1 793 aa24.98■■□□□ 1.59
LMNB2-205ENST00000532465 ARHGEF1Q92888 912 aaKnown RBP24.98■■□□□ 1.59
LMNB2-205ENST00000532465 FCHSD2O94868 740 aa24.97■■□□□ 1.59
LMNB2-205ENST00000532465 TEFQ10587 303 aa24.96■■□□□ 1.59
LMNB2-205ENST00000532465 ADRA2BP18089 450 aa24.95■■□□□ 1.58
LMNB2-205ENST00000532465 YY1P25490 414 aa24.94■■□□□ 1.58
LMNB2-205ENST00000532465 INTS5Q6P9B9 1019 aaKnown RBP24.94■■□□□ 1.58
LMNB2-205ENST00000532465 UBR2Q8IWV8 1755 aa24.94■■□□□ 1.58
LMNB2-205ENST00000532465 CEMIPQ8WUJ3 1361 aa24.93■■□□□ 1.58
LMNB2-205ENST00000532465 SIPA1L3O60292 1781 aaPredicted RBP24.93■■□□□ 1.58
LMNB2-205ENST00000532465 C4AP0C0L4 1744 aa24.93■■□□□ 1.58
LMNB2-205ENST00000532465 RFC4P35249 363 aa24.93■■□□□ 1.58
LMNB2-205ENST00000532465 GPR162Q16538 588 aa24.92■■□□□ 1.58
LMNB2-205ENST00000532465 PELP1Q8IZL8 1130 aaKnown RBP24.92■■□□□ 1.58
LMNB2-205ENST00000532465 TTC5Q8N0Z6 440 aa24.92■■□□□ 1.58
LMNB2-205ENST00000532465 MMP10P09238 476 aa24.91■■□□□ 1.58
LMNB2-205ENST00000532465 CYP19A1P11511 503 aaPredicted RBP24.91■■□□□ 1.58
LMNB2-205ENST00000532465 GYS1P13807 737 aa24.91■■□□□ 1.58
LMNB2-205ENST00000532465 RALBP1Q15311 655 aa24.91■■□□□ 1.58
LMNB2-205ENST00000532465 CCDC87Q9NVE4 849 aa24.91■■□□□ 1.58
LMNB2-205ENST00000532465 CD2APQ9Y5K6 639 aa24.91■■□□□ 1.58
LMNB2-205ENST00000532465 UTRNP46939 3433 aa24.89■■□□□ 1.58
LMNB2-205ENST00000532465 ZNF790Q6PG37 636 aa24.89■■□□□ 1.58
LMNB2-205ENST00000532465 VSIG10Q8N0Z9 540 aa24.89■■□□□ 1.58
LMNB2-205ENST00000532465 NLGN1Q8N2Q7 840 aa24.89■■□□□ 1.58
LMNB2-205ENST00000532465 SRP68Q9UHB9 627 aaKnown RBP24.89■■□□□ 1.58
LMNB2-205ENST00000532465 MCM10Q7L590 875 aa24.88■■□□□ 1.57
LMNB2-205ENST00000532465 ZNF496Q96IT1 587 aaPredicted RBP24.88■■□□□ 1.57
LMNB2-205ENST00000532465 DCTN1Q14203 1278 aa24.87■■□□□ 1.57
LMNB2-205ENST00000532465 RTF1Q92541 710 aaKnown RBP24.87■■□□□ 1.57
LMNB2-205ENST00000532465 ZBTB1Q9Y2K1 713 aa24.87■■□□□ 1.57
LMNB2-205ENST00000532465 SOS1Q07889 1333 aaPredicted RBP24.86■■□□□ 1.57
LMNB2-205ENST00000532465 USP42Q9H9J4 1324 aaKnown RBP24.86■■□□□ 1.57
LMNB2-205ENST00000532465 KCNQ3O43525 872 aa24.86■■□□□ 1.57
LMNB2-205ENST00000532465 HEG1Q9ULI3 1381 aa24.85■■□□□ 1.57
LMNB2-205ENST00000532465 BTBD11A6QL63 1104 aa24.85■■□□□ 1.57
LMNB2-205ENST00000532465 YBX3P16989 372 aaKnown RBP eCLIP24.85■■□□□ 1.572e-8■□□□□ 8.6
LMNB2-205ENST00000532465 PLEKHF1Q96S99 279 aa24.85■■□□□ 1.57
LMNB2-205ENST00000532465 NEFMP07197 916 aa24.83■■□□□ 1.57
LMNB2-205ENST00000532465 COL15A1P39059 1388 aa24.82■■□□□ 1.56
LMNB2-205ENST00000532465 HTATSF1O43719 755 aaKnown RBP24.82■■□□□ 1.56
LMNB2-205ENST00000532465 FKBP8Q14318 412 aa24.82■■□□□ 1.56
LMNB2-205ENST00000532465 FMNL2Q96PY5 1086 aa24.82■■□□□ 1.56
LMNB2-205ENST00000532465 MYBBP1AQ9BQG0 1328 aaKnown RBP24.82■■□□□ 1.56
LMNB2-205ENST00000532465 STARD3NLO95772 234 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms