RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 NFATC2IPQ8NCF5 419 aa30.77■■■□□ 2.52
CAPN1-222ENST00000532285 SLC16A10Q8TF71 515 aa30.77■■■□□ 2.52
CAPN1-222ENST00000532285 ADAMTS7Q9UKP4 1686 aa30.75■■■□□ 2.51
CAPN1-222ENST00000532285 U2AF1L5P0DN76 240 aaPredicted RBP30.74■■■□□ 2.51
CAPN1-222ENST00000532285 ATP6V1AP38606 617 aa30.74■■■□□ 2.51
CAPN1-222ENST00000532285 PTGER2P43116 358 aa30.74■■■□□ 2.51
CAPN1-222ENST00000532285 U2AF1Q01081 240 aaKnown RBP eCLIP30.74■■■□□ 2.51
CAPN1-222ENST00000532285 RALBP1Q15311 655 aa30.74■■■□□ 2.51
CAPN1-222ENST00000532285 LGR6Q9HBX8 967 aa30.74■■■□□ 2.51
CAPN1-222ENST00000532285 RNMTO43148 476 aaKnown RBP30.73■■■□□ 2.51
CAPN1-222ENST00000532285 GAS2L2Q8NHY3 880 aa30.73■■■□□ 2.51
CAPN1-222ENST00000532285 RSPH6AQ9H0K4 717 aa30.73■■■□□ 2.51
CAPN1-222ENST00000532285 UBR3Q6ZT12 1888 aa30.72■■■□□ 2.51
CAPN1-222ENST00000532285 PRKAR2BP31323 418 aa30.72■■■□□ 2.51
CAPN1-222ENST00000532285 COL24A1Q17RW2 1714 aa30.71■■■□□ 2.51
CAPN1-222ENST00000532285 FLAD1Q8NFF5 587 aa30.71■■■□□ 2.51
CAPN1-222ENST00000532285 AK7Q96M32 723 aa30.71■■■□□ 2.51
CAPN1-222ENST00000532285 RBM42Q9BTD8 480 aaKnown RBP30.71■■■□□ 2.51
CAPN1-222ENST00000532285 SLC52A2Q9HAB3 445 aa30.71■■■□□ 2.51
CAPN1-222ENST00000532285 MRC1P22897 1456 aa30.7■■■□□ 2.51
CAPN1-222ENST00000532285 FCHSD2O94868 740 aa30.7■■■□□ 2.51
CAPN1-222ENST00000532285 LINC00116Q8NCU8 138 aa30.7■■■□□ 2.51
CAPN1-222ENST00000532285 ITPK1Q13572 414 aa30.69■■■□□ 2.5
CAPN1-222ENST00000532285 COL23A1Q86Y22 540 aaPredicted RBP30.69■■■□□ 2.5
CAPN1-222ENST00000532285 SGIP1Q9BQI5 828 aa30.69■■■□□ 2.5
CAPN1-222ENST00000532285 MSH5O43196 834 aa30.68■■■□□ 2.5
CAPN1-222ENST00000532285 MAP3K5Q99683 1374 aa30.67■■■□□ 2.5
CAPN1-222ENST00000532285 COL5A3P25940 1745 aaPredicted RBP30.67■■■□□ 2.5
CAPN1-222ENST00000532285 GNAT3A8MTJ3 354 aa30.67■■■□□ 2.5
CAPN1-222ENST00000532285 PHACTR3Q96KR7 559 aa30.67■■■□□ 2.5
CAPN1-222ENST00000532285 SLC4A9Q96Q91 983 aa30.66■■■□□ 2.5
CAPN1-222ENST00000532285 PTCD1O75127 700 aaKnown RBP30.64■■■□□ 2.5
CAPN1-222ENST00000532285 CICQ96RK0 1608 aaPredicted RBP30.62■■■□□ 2.49
CAPN1-222ENST00000532285 SIPA1L3O60292 1781 aaPredicted RBP30.61■■■□□ 2.49
CAPN1-222ENST00000532285 SSFA2P28290 1259 aa30.61■■■□□ 2.49
CAPN1-222ENST00000532285 POLD1P28340 1107 aa30.61■■■□□ 2.49
CAPN1-222ENST00000532285 ARXQ96QS3 562 aa30.61■■■□□ 2.49
CAPN1-222ENST00000532285 GNPATO15228 680 aa30.6■■■□□ 2.49
CAPN1-222ENST00000532285 RC3H1Q5TC82 1133 aaKnown RBP30.6■■■□□ 2.49
CAPN1-222ENST00000532285 IL17REQ8NFR9 667 aa30.6■■■□□ 2.49
CAPN1-222ENST00000532285 MYBBP1AQ9BQG0 1328 aaKnown RBP30.6■■■□□ 2.49
CAPN1-222ENST00000532285 TJP1Q07157 1748 aa30.59■■■□□ 2.49
CAPN1-222ENST00000532285 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.59■■■□□ 2.49
CAPN1-222ENST00000532285 AMIGO3Q86WK7 504 aa30.59■■■□□ 2.49
CAPN1-222ENST00000532285 MYH14Q7Z406 1995 aaKnown RBP30.58■■■□□ 2.49
CAPN1-222ENST00000532285 PHF14O94880 888 aa30.58■■■□□ 2.49
CAPN1-222ENST00000532285 TEFQ10587 303 aa30.58■■■□□ 2.49
CAPN1-222ENST00000532285 SLC39A6Q13433 755 aa30.57■■■□□ 2.48
CAPN1-222ENST00000532285 UBR2Q8IWV8 1755 aa30.56■■■□□ 2.48
CAPN1-222ENST00000532285 CNTNAP4Q9C0A0 1308 aa30.56■■■□□ 2.48
CAPN1-222ENST00000532285 NEFMP07197 916 aa30.56■■■□□ 2.48
CAPN1-222ENST00000532285 CEMIPQ8WUJ3 1361 aa30.55■■■□□ 2.48
CAPN1-222ENST00000532285 SMIM5Q71RC9 77 aa30.55■■■□□ 2.48
CAPN1-222ENST00000532285 FHDC1Q9C0D6 1143 aaPredicted RBP30.55■■■□□ 2.48
CAPN1-222ENST00000532285 PNNQ9H307 717 aaKnown RBP30.55■■■□□ 2.48
CAPN1-222ENST00000532285 RTCBQ9Y3I0 505 aaKnown RBP30.55■■■□□ 2.48
CAPN1-222ENST00000532285 DLG5Q8TDM6 1919 aa30.54■■■□□ 2.48
CAPN1-222ENST00000532285 KCPQ6ZWJ8 1503 aa30.53■■■□□ 2.48
CAPN1-222ENST00000532285 RTF1Q92541 710 aaKnown RBP30.53■■■□□ 2.48
CAPN1-222ENST00000532285 MSL1Q68DK7 614 aa30.52■■■□□ 2.48
CAPN1-222ENST00000532285 SYT17Q9BSW7 474 aa30.52■■■□□ 2.48
CAPN1-222ENST00000532285 HTATSF1O43719 755 aaKnown RBP30.51■■■□□ 2.47
CAPN1-222ENST00000532285 RPS6KA4O75676 772 aa30.51■■■□□ 2.47
CAPN1-222ENST00000532285 TRAPPC3LQ5T215 181 aa30.51■■■□□ 2.47
CAPN1-222ENST00000532285 TTC5Q8N0Z6 440 aa30.51■■■□□ 2.47
CAPN1-222ENST00000532285 PLEKHF1Q96S99 279 aa30.51■■■□□ 2.47
CAPN1-222ENST00000532285 ADRA2BP18089 450 aa30.5■■■□□ 2.47
CAPN1-222ENST00000532285 CRKLP46109 303 aaKnown RBP30.5■■■□□ 2.47
CAPN1-222ENST00000532285 VSIG10Q8N0Z9 540 aa30.5■■■□□ 2.47
CAPN1-222ENST00000532285 PRKRIP1Q9H875 184 aaPredicted RBP30.5■■■□□ 2.47
CAPN1-222ENST00000532285 ZNF790Q6PG37 636 aa30.48■■■□□ 2.47
CAPN1-222ENST00000532285 ZNF316A6NFI3 1004 aaPredicted RBP30.47■■■□□ 2.47
CAPN1-222ENST00000532285 DNAJC10Q8IXB1 793 aa30.47■■■□□ 2.47
CAPN1-222ENST00000532285 DCAF8L1A6NGE4 600 aa30.46■■■□□ 2.47
CAPN1-222ENST00000532285 MCM10Q7L590 875 aa30.46■■■□□ 2.47
CAPN1-222ENST00000532285 C4AP0C0L4 1744 aa30.45■■■□□ 2.47
CAPN1-222ENST00000532285 ARHGEF1Q92888 912 aaKnown RBP30.45■■■□□ 2.47
CAPN1-222ENST00000532285 MAPK8IP3Q9UPT6 1336 aa30.45■■■□□ 2.46
CAPN1-222ENST00000532285 BTBD11A6QL63 1104 aa30.44■■■□□ 2.46
CAPN1-222ENST00000532285 INTS5Q6P9B9 1019 aaKnown RBP30.44■■■□□ 2.46
CAPN1-222ENST00000532285 CYP19A1P11511 503 aaPredicted RBP30.43■■■□□ 2.46
CAPN1-222ENST00000532285 RFC4P35249 363 aa30.43■■■□□ 2.46
CAPN1-222ENST00000532285 NFE2L2Q16236 605 aa30.43■■■□□ 2.46
CAPN1-222ENST00000532285 CCDC87Q9NVE4 849 aa30.43■■■□□ 2.46
CAPN1-222ENST00000532285 DCTN1Q14203 1278 aa30.42■■■□□ 2.46
CAPN1-222ENST00000532285 KLHL34Q8N239 644 aa30.42■■■□□ 2.46
CAPN1-222ENST00000532285 ZNF496Q96IT1 587 aaPredicted RBP30.42■■■□□ 2.46
CAPN1-222ENST00000532285 HEG1Q9ULI3 1381 aa30.41■■■□□ 2.46
CAPN1-222ENST00000532285 FMNL2Q96PY5 1086 aa30.4■■■□□ 2.46
CAPN1-222ENST00000532285 TEX13AQ9BXU3 409 aaPredicted RBP30.39■■■□□ 2.46
CAPN1-222ENST00000532285 STARD3NLO95772 234 aa30.38■■■□□ 2.45
CAPN1-222ENST00000532285 WDR43Q15061 677 aaKnown RBP eCLIP30.38■■■□□ 2.45
CAPN1-222ENST00000532285 NLGN1Q8N2Q7 840 aa30.38■■■□□ 2.45
CAPN1-222ENST00000532285 TAF7Q15545 349 aaPredicted RBP30.37■■■□□ 2.45
CAPN1-222ENST00000532285 KCNQ3O43525 872 aa30.36■■■□□ 2.45
CAPN1-222ENST00000532285 SOS1Q07889 1333 aaPredicted RBP30.35■■■□□ 2.45
CAPN1-222ENST00000532285 GYS1P13807 737 aa30.34■■■□□ 2.45
CAPN1-222ENST00000532285 CD2APQ9Y5K6 639 aa30.34■■■□□ 2.45
CAPN1-222ENST00000532285 ZBTB1Q9Y2K1 713 aa30.33■■■□□ 2.45
CAPN1-222ENST00000532285 USP42Q9H9J4 1324 aaKnown RBP30.32■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms