RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 MRC1P22897 1456 aa29.32■■■□□ 2.28
LRRK1-208ENST00000532029 DCTN1Q14203 1278 aa29.32■■■□□ 2.28
LRRK1-208ENST00000532029 CEMIPQ8WUJ3 1361 aa29.31■■■□□ 2.28
LRRK1-208ENST00000532029 SMARCC1Q92922 1105 aaPredicted RBP29.31■■■□□ 2.28
LRRK1-208ENST00000532029 VIRMAQ69YN4 1812 aaKnown RBP29.31■■■□□ 2.28
LRRK1-208ENST00000532029 EZH2Q15910 746 aaKnown RBP29.29■■■□□ 2.28
LRRK1-208ENST00000532029 CAMKK2Q96RR4 588 aa29.29■■■□□ 2.28
LRRK1-208ENST00000532029 RGPD3A6NKT7 1758 aaPredicted RBP29.28■■■□□ 2.28
LRRK1-208ENST00000532029 RGPD4Q7Z3J3 1758 aa29.28■■■□□ 2.28
LRRK1-208ENST00000532029 PALLDQ8WX93 1383 aa29.27■■■□□ 2.28
LRRK1-208ENST00000532029 ATG3Q9NT62 314 aa29.26■■■□□ 2.27
LRRK1-208ENST00000532029 ASAP1Q9ULH1 1129 aa29.26■■■□□ 2.27
LRRK1-208ENST00000532029 THUMPD2Q9BTF0 503 aaKnown RBP29.25■■■□□ 2.27
LRRK1-208ENST00000532029 TXNRD1Q16881 649 aa29.24■■■□□ 2.27
LRRK1-208ENST00000532029 TRIM35Q9UPQ4 493 aa29.23■■■□□ 2.27
LRRK1-208ENST00000532029 SENP3-EIF4A1A0A087X0R7 540 aa29.21■■■□□ 2.27
LRRK1-208ENST00000532029 BTBD11A6QL63 1104 aa29.21■■■□□ 2.27
LRRK1-208ENST00000532029 TAF7Q15545 349 aaPredicted RBP29.21■■■□□ 2.27
LRRK1-208ENST00000532029 SLC27A3Q5K4L6 730 aa29.21■■■□□ 2.27
LRRK1-208ENST00000532029 SLC39A6Q13433 755 aa29.2■■■□□ 2.26
LRRK1-208ENST00000532029 TTC5Q8N0Z6 440 aa29.2■■■□□ 2.26
LRRK1-208ENST00000532029 CCNL1Q9UK58 526 aaPredicted RBP29.2■■■□□ 2.26
LRRK1-208ENST00000532029 SIPA1L3O60292 1781 aaPredicted RBP29.2■■■□□ 2.26
LRRK1-208ENST00000532029 LY75O60449 1722 aa29.2■■■□□ 2.26
LRRK1-208ENST00000532029 PROM2Q8N271 834 aa29.19■■■□□ 2.26
LRRK1-208ENST00000532029 RBM42Q9BTD8 480 aaKnown RBP29.19■■■□□ 2.26
LRRK1-208ENST00000532029 RREB1Q92766 1687 aa29.18■■■□□ 2.26
LRRK1-208ENST00000532029 LOC102724428A0A0B4J2F2 783 aa29.17■■■□□ 2.26
LRRK1-208ENST00000532029 SIK1P57059 783 aa29.17■■■□□ 2.26
LRRK1-208ENST00000532029 NCBP3Q53F19 620 aaKnown RBP29.17■■■□□ 2.26
LRRK1-208ENST00000532029 PAPPAQ13219 1627 aa29.16■■■□□ 2.26
LRRK1-208ENST00000532029 PTCD1O75127 700 aaKnown RBP29.16■■■□□ 2.26
LRRK1-208ENST00000532029 ZNF790Q6PG37 636 aa29.16■■■□□ 2.26
LRRK1-208ENST00000532029 SALL2Q9Y467 1007 aaPredicted RBP29.16■■■□□ 2.26
LRRK1-208ENST00000532029 CALD1Q05682 793 aaKnown RBP29.15■■■□□ 2.26
LRRK1-208ENST00000532029 CCDC27Q2M243 656 aa29.15■■■□□ 2.26
LRRK1-208ENST00000532029 NGEFQ8N5V2 710 aa29.15■■■□□ 2.26
LRRK1-208ENST00000532029 HMGB2P26583 209 aaKnown RBP29.14■■■□□ 2.26
LRRK1-208ENST00000532029 ATP6V1AP38606 617 aa29.13■■■□□ 2.25
LRRK1-208ENST00000532029 KCNQ4P56696 695 aa29.13■■■□□ 2.25
LRRK1-208ENST00000532029 LRRC4BQ9NT99 713 aa29.13■■■□□ 2.25
LRRK1-208ENST00000532029 NUP188Q5SRE5 1749 aa29.13■■■□□ 2.25
LRRK1-208ENST00000532029 MIS18AQ9NYP9 233 aa29.12■■■□□ 2.25
LRRK1-208ENST00000532029 NBPF14Q5TI25 921 aa29.11■■■□□ 2.25
LRRK1-208ENST00000532029 LAS1LQ9Y4W2 734 aaKnown RBP29.11■■■□□ 2.25
LRRK1-208ENST00000532029 WWC1Q8IX03 1113 aa29.1■■■□□ 2.25
LRRK1-208ENST00000532029 BABAM1Q9NWV8 329 aa29.1■■■□□ 2.25
LRRK1-208ENST00000532029 TSPYL4Q9UJ04 414 aa29.1■■■□□ 2.25
LRRK1-208ENST00000532029 KCPQ6ZWJ8 1503 aa29.1■■■□□ 2.25
LRRK1-208ENST00000532029 KCNQ3O43525 872 aa29.09■■■□□ 2.25
LRRK1-208ENST00000532029 FMNL2Q96PY5 1086 aa29.09■■■□□ 2.25
LRRK1-208ENST00000532029 ZNF496Q96IT1 587 aaPredicted RBP29.08■■■□□ 2.25
LRRK1-208ENST00000532029 UBR2Q8IWV8 1755 aa29.08■■■□□ 2.25
LRRK1-208ENST00000532029 SLC4A9Q96Q91 983 aa29.07■■■□□ 2.24
LRRK1-208ENST00000532029 ZNF831Q5JPB2 1677 aa29.06■■■□□ 2.24
LRRK1-208ENST00000532029 ITPK1Q13572 414 aa29.06■■■□□ 2.24
LRRK1-208ENST00000532029 STK32BQ9NY57 414 aa29.06■■■□□ 2.24
LRRK1-208ENST00000532029 KDM3BQ7LBC6 1761 aa29.06■■■□□ 2.24
LRRK1-208ENST00000532029 GNAI1P63096 354 aa29.05■■■□□ 2.24
LRRK1-208ENST00000532029 VSIG10Q8N0Z9 540 aa29.05■■■□□ 2.24
LRRK1-208ENST00000532029 CFAP44Q96MT7 982 aa29.05■■■□□ 2.24
LRRK1-208ENST00000532029 IFT57Q9NWB7 429 aa29.05■■■□□ 2.24
LRRK1-208ENST00000532029 C5P01031 1676 aa29.05■■■□□ 2.24
LRRK1-208ENST00000532029 HEG1Q9ULI3 1381 aa29.04■■■□□ 2.24
LRRK1-208ENST00000532029 CHL1O00533 1208 aa29.04■■■□□ 2.24
LRRK1-208ENST00000532029 ANO8Q9HCE9 1232 aaPredicted RBP29.03■■■□□ 2.24
LRRK1-208ENST00000532029 WDR63Q8IWG1 891 aa29.02■■■□□ 2.24
LRRK1-208ENST00000532029 DNAJC10Q8IXB1 793 aa29.02■■■□□ 2.24
LRRK1-208ENST00000532029 LINC00116Q8NCU8 138 aa29.02■■■□□ 2.24
LRRK1-208ENST00000532029 IL16Q14005 1332 aa29.01■■■□□ 2.23
LRRK1-208ENST00000532029 TEX13AQ9BXU3 409 aaPredicted RBP29.01■■■□□ 2.23
LRRK1-208ENST00000532029 TJP1Q07157 1748 aa29■■■□□ 2.23
LRRK1-208ENST00000532029 TAF1LQ8IZX4 1826 aa29■■■□□ 2.23
LRRK1-208ENST00000532029 ZNF853P0CG23 659 aa29■■■□□ 2.23
LRRK1-208ENST00000532029 EIF4A1P60842 406 aaKnown RBP29■■■□□ 2.23
LRRK1-208ENST00000532029 SLC15A2Q16348 729 aa29■■■□□ 2.23
LRRK1-208ENST00000532029 CICQ96RK0 1608 aaPredicted RBP29■■■□□ 2.23
LRRK1-208ENST00000532029 SNRPA1P09661 255 aaKnown RBP28.99■■■□□ 2.23
LRRK1-208ENST00000532029 ZNF827Q17R98 1081 aa28.99■■■□□ 2.23
LRRK1-208ENST00000532029 AKT1S1Q96B36 256 aa28.99■■■□□ 2.23
LRRK1-208ENST00000532029 AK7Q96M32 723 aa28.99■■■□□ 2.23
LRRK1-208ENST00000532029 MBIPQ9NS73 344 aa28.99■■■□□ 2.23
LRRK1-208ENST00000532029 C4BP0C0L5 1744 aa28.99■■■□□ 2.23
LRRK1-208ENST00000532029 STARD3NLO95772 234 aa28.97■■■□□ 2.23
LRRK1-208ENST00000532029 TFCP2L1Q9NZI6 479 aa28.97■■■□□ 2.23
LRRK1-208ENST00000532029 HNRNPUQ00839 825 aaKnown RBP eCLIP28.96■■■□□ 2.23
LRRK1-208ENST00000532029 R3HDM1Q15032 1099 aaKnown RBP28.96■■■□□ 2.23
LRRK1-208ENST00000532029 COL5A3P25940 1745 aaPredicted RBP28.96■■■□□ 2.23
LRRK1-208ENST00000532029 CNTNAP4Q9C0A0 1308 aa28.95■■■□□ 2.23
LRRK1-208ENST00000532029 CYP19A1P11511 503 aaPredicted RBP28.95■■■□□ 2.22
LRRK1-208ENST00000532029 RC3H1Q5TC82 1133 aaKnown RBP28.95■■■□□ 2.22
LRRK1-208ENST00000532029 ZNF521Q96K83 1311 aa28.94■■■□□ 2.22
LRRK1-208ENST00000532029 PSDA5PKW4 1024 aaPredicted RBP28.94■■■□□ 2.22
LRRK1-208ENST00000532029 CRKLP46109 303 aaKnown RBP28.94■■■□□ 2.22
LRRK1-208ENST00000532029 GNPATO15228 680 aa28.93■■■□□ 2.22
LRRK1-208ENST00000532029 GIGYF1O75420 1035 aaPredicted RBP28.93■■■□□ 2.22
LRRK1-208ENST00000532029 PRAMEF22A3QJZ6 481 aa28.92■■■□□ 2.22
LRRK1-208ENST00000532029 CCDC87Q9NVE4 849 aa28.92■■■□□ 2.22
LRRK1-208ENST00000532029 GOLGA2Q08379 1002 aa28.91■■■□□ 2.22
LRRK1-208ENST00000532029 TSR2Q969E8 191 aaKnown RBP28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms