RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 SLC52A2Q9HAB3 445 aa24.77■■□□□ 1.56
SMPD1-205ENST00000531303 TSPYL4Q9UJ04 414 aa24.77■■□□□ 1.56
SMPD1-205ENST00000531303 TOGARAM1Q9Y4F4 1720 aa24.76■■□□□ 1.55
SMPD1-205ENST00000531303 DUSP27Q5VZP5 1158 aa24.76■■□□□ 1.55
SMPD1-205ENST00000531303 MBIPQ9NS73 344 aa24.76■■□□□ 1.55
SMPD1-205ENST00000531303 FANCIQ9NVI1 1328 aa24.75■■□□□ 1.55
SMPD1-205ENST00000531303 ERVV-2B6SEH9 535 aa24.75■■□□□ 1.55
SMPD1-205ENST00000531303 CHL1O00533 1208 aa24.75■■□□□ 1.55
SMPD1-205ENST00000531303 TRMT2AQ8IZ69 625 aaKnown RBP24.75■■□□□ 1.55
SMPD1-205ENST00000531303 SYTL4Q96C24 671 aaPredicted RBP24.75■■□□□ 1.55
SMPD1-205ENST00000531303 ACSBG1Q96GR2 724 aa24.75■■□□□ 1.55
SMPD1-205ENST00000531303 BTBD11A6QL63 1104 aa24.74■■□□□ 1.55
SMPD1-205ENST00000531303 SIPA1L3O60292 1781 aaPredicted RBP24.74■■□□□ 1.55
SMPD1-205ENST00000531303 DOT1LQ8TEK3 1739 aa24.73■■□□□ 1.55
SMPD1-205ENST00000531303 ITGB4P16144 1822 aa24.72■■□□□ 1.55
SMPD1-205ENST00000531303 PRIM1P49642 420 aaKnown RBP24.72■■□□□ 1.55
SMPD1-205ENST00000531303 KRT27Q7Z3Y8 459 aa24.71■■□□□ 1.55
SMPD1-205ENST00000531303 TMOD3Q9NYL9 352 aa24.71■■□□□ 1.55
SMPD1-205ENST00000531303 EXOSC9Q06265 439 aaKnown RBP24.7■■□□□ 1.55
SMPD1-205ENST00000531303 MRC1P22897 1456 aa24.7■■□□□ 1.54
SMPD1-205ENST00000531303 KCNQ3O43525 872 aa24.7■■□□□ 1.54
SMPD1-205ENST00000531303 SLC39A6Q13433 755 aa24.7■■□□□ 1.54
SMPD1-205ENST00000531303 RGS12O14924 1447 aa24.69■■□□□ 1.54
SMPD1-205ENST00000531303 PIGBQ92521 554 aa24.68■■□□□ 1.54
SMPD1-205ENST00000531303 KRT24Q2M2I5 525 aa24.67■■□□□ 1.54
SMPD1-205ENST00000531303 BABAM1Q9NWV8 329 aa24.67■■□□□ 1.54
SMPD1-205ENST00000531303 KDM3BQ7LBC6 1761 aa24.67■■□□□ 1.54
SMPD1-205ENST00000531303 ELL2O00472 640 aaPredicted RBP24.66■■□□□ 1.54
SMPD1-205ENST00000531303 KCNQ2O43526 872 aa24.66■■□□□ 1.54
SMPD1-205ENST00000531303 TTC5Q8N0Z6 440 aa24.64■■□□□ 1.54
SMPD1-205ENST00000531303 C8orf58Q8NAV2 365 aa24.64■■□□□ 1.54
SMPD1-205ENST00000531303 ZNF790Q6PG37 636 aa24.64■■□□□ 1.53
SMPD1-205ENST00000531303 TSPYL6Q8N831 410 aa24.64■■□□□ 1.53
SMPD1-205ENST00000531303 BCL9O00512 1426 aa24.63■■□□□ 1.53
SMPD1-205ENST00000531303 EIF4A1P60842 406 aaKnown RBP24.62■■□□□ 1.53
SMPD1-205ENST00000531303 PTF1AQ7RTS3 328 aa24.62■■□□□ 1.53
SMPD1-205ENST00000531303 ASAP1Q9ULH1 1129 aa24.62■■□□□ 1.53
SMPD1-205ENST00000531303 FAM196AQ6ZSG2 479 aa24.61■■□□□ 1.53
SMPD1-205ENST00000531303 SBF2Q86WG5 1849 aa24.61■■□□□ 1.53
SMPD1-205ENST00000531303 TWISTNBQ3B726 338 aaPredicted RBP24.59■■□□□ 1.53
SMPD1-205ENST00000531303 ATG3Q9NT62 314 aa24.59■■□□□ 1.53
SMPD1-205ENST00000531303 PTCD1O75127 700 aaKnown RBP24.58■■□□□ 1.53
SMPD1-205ENST00000531303 ZNF496Q96IT1 587 aaPredicted RBP24.58■■□□□ 1.53
SMPD1-205ENST00000531303 RCAN3Q9UKA8 241 aa24.58■■□□□ 1.52
SMPD1-205ENST00000531303 NHSQ6T4R5 1651 aa24.57■■□□□ 1.52
SMPD1-205ENST00000531303 PAPPAQ13219 1627 aa24.57■■□□□ 1.52
SMPD1-205ENST00000531303 VAMP4O75379 141 aa24.56■■□□□ 1.52
SMPD1-205ENST00000531303 FMNL2Q96PY5 1086 aa24.56■■□□□ 1.52
SMPD1-205ENST00000531303 RBM42Q9BTD8 480 aaKnown RBP24.56■■□□□ 1.52
SMPD1-205ENST00000531303 TCERG1O14776 1098 aaKnown RBP24.55■■□□□ 1.52
SMPD1-205ENST00000531303 TRIM37O94972 964 aa24.55■■□□□ 1.52
SMPD1-205ENST00000531303 NECTIN2Q92692 538 aa24.55■■□□□ 1.52
SMPD1-205ENST00000531303 BTAF1O14981 1849 aa24.55■■□□□ 1.52
SMPD1-205ENST00000531303 PRAMEF22A3QJZ6 481 aa24.54■■□□□ 1.52
SMPD1-205ENST00000531303 UBR2Q8IWV8 1755 aa24.53■■□□□ 1.52
SMPD1-205ENST00000531303 GIGYF1O75420 1035 aaPredicted RBP24.52■■□□□ 1.52
SMPD1-205ENST00000531303 CT47B1P0C2W7 299 aaPredicted RBP24.52■■□□□ 1.52
SMPD1-205ENST00000531303 EIF2S2P20042 333 aaKnown RBP24.52■■□□□ 1.52
SMPD1-205ENST00000531303 BCL2L13Q9BXK5 485 aa24.52■■□□□ 1.52
SMPD1-205ENST00000531303 KCPQ6ZWJ8 1503 aa24.52■■□□□ 1.52
SMPD1-205ENST00000531303 BCL11BQ9C0K0 894 aaPredicted RBP24.51■■□□□ 1.51
SMPD1-205ENST00000531303 SNRPA1P09661 255 aaKnown RBP24.51■■□□□ 1.51
SMPD1-205ENST00000531303 RARSP54136 660 aaKnown RBP24.51■■□□□ 1.51
SMPD1-205ENST00000531303 HEG1Q9ULI3 1381 aa24.5■■□□□ 1.51
SMPD1-205ENST00000531303 SMARCC1Q92922 1105 aaPredicted RBP24.5■■□□□ 1.51
SMPD1-205ENST00000531303 C5P01031 1676 aa24.5■■□□□ 1.51
SMPD1-205ENST00000531303 PALLDQ8WX93 1383 aa24.5■■□□□ 1.51
SMPD1-205ENST00000531303 BCAR3O75815 825 aa24.49■■□□□ 1.51
SMPD1-205ENST00000531303 SUPT16HQ9Y5B9 1047 aaKnown RBP24.49■■□□□ 1.51
SMPD1-205ENST00000531303 HDGFL1Q5TGJ6 251 aa24.48■■□□□ 1.51
SMPD1-205ENST00000531303 SSH1Q8WYL5 1049 aa24.48■■□□□ 1.51
SMPD1-205ENST00000531303 SMC4Q9NTJ3 1288 aa24.48■■□□□ 1.51
SMPD1-205ENST00000531303 SLC4A9Q96Q91 983 aa24.46■■□□□ 1.51
SMPD1-205ENST00000531303 USP16Q9Y5T5 823 aa24.46■■□□□ 1.51
SMPD1-205ENST00000531303 SOS1Q07889 1333 aaPredicted RBP24.45■■□□□ 1.51
SMPD1-205ENST00000531303 HOXB7P09629 217 aa24.45■■□□□ 1.51
SMPD1-205ENST00000531303 LOC102724428A0A0B4J2F2 783 aa24.45■■□□□ 1.5
SMPD1-205ENST00000531303 SIK1P57059 783 aa24.45■■□□□ 1.5
SMPD1-205ENST00000531303 CCDC30Q5VVM6 783 aa24.45■■□□□ 1.5
SMPD1-205ENST00000531303 DNAJC10Q8IXB1 793 aa24.45■■□□□ 1.5
SMPD1-205ENST00000531303 ZNF428Q96B54 188 aa24.45■■□□□ 1.5
SMPD1-205ENST00000531303 EP400Q96L91 3159 aa24.44■■□□□ 1.5
SMPD1-205ENST00000531303 ATP6V1AP38606 617 aa24.44■■□□□ 1.5
SMPD1-205ENST00000531303 KCNQ4P56696 695 aa24.44■■□□□ 1.5
SMPD1-205ENST00000531303 ALDH1L2Q3SY69 923 aa24.43■■□□□ 1.5
SMPD1-205ENST00000531303 VSIG10Q8N0Z9 540 aa24.43■■□□□ 1.5
SMPD1-205ENST00000531303 STK31Q9BXU1 1019 aa24.43■■□□□ 1.5
SMPD1-205ENST00000531303 CHPF2Q9P2E5 772 aa24.42■■□□□ 1.5
SMPD1-205ENST00000531303 APBA3O96018 575 aa24.41■■□□□ 1.5
SMPD1-205ENST00000531303 SLC4A2P04920 1241 aa24.41■■□□□ 1.5
SMPD1-205ENST00000531303 PIP4K2AP48426 406 aaPredicted RBP24.41■■□□□ 1.5
SMPD1-205ENST00000531303 MRPL50Q8N5N7 158 aaKnown RBP24.41■■□□□ 1.5
SMPD1-205ENST00000531303 FRAT1Q92837 279 aaPredicted RBP24.41■■□□□ 1.5
SMPD1-205ENST00000531303 LAMB4A4D0S4 1761 aa24.41■■□□□ 1.5
SMPD1-205ENST00000531303 PLIN1O60240 522 aa24.4■■□□□ 1.5
SMPD1-205ENST00000531303 ANXA1P04083 346 aa24.4■■□□□ 1.5
SMPD1-205ENST00000531303 TJP1Q07157 1748 aa24.39■■□□□ 1.5
SMPD1-205ENST00000531303 ITPK1Q13572 414 aa24.39■■□□□ 1.5
SMPD1-205ENST00000531303 TEX13AQ9BXU3 409 aaPredicted RBP24.39■■□□□ 1.5
SMPD1-205ENST00000531303 CHMP4AQ9BY43 222 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms