RNA–Protein interactions for RNA: ENST00000530278.5

NFRKB-207, Transcript of nuclear factor related to kappaB binding protein, humanhuman

TSL 3

Gene NFRKB, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-207ENST00000530278 U2AF1L5P0DN76 240 aaPredicted RBP29.39■■■□□ 2.3
NFRKB-207ENST00000530278 ATP6V1AP38606 617 aa29.39■■■□□ 2.3
NFRKB-207ENST00000530278 U2AF1Q01081 240 aaKnown RBP eCLIP29.39■■■□□ 2.3
NFRKB-207ENST00000530278 RBM42Q9BTD8 480 aaKnown RBP29.39■■■□□ 2.3
NFRKB-207ENST00000530278 MSH5O43196 834 aa29.38■■■□□ 2.29
NFRKB-207ENST00000530278 PTGER2P43116 358 aa29.38■■■□□ 2.29
NFRKB-207ENST00000530278 AK7Q96M32 723 aa29.38■■■□□ 2.29
NFRKB-207ENST00000530278 VIRMAQ69YN4 1812 aaKnown RBP29.38■■■□□ 2.29
NFRKB-207ENST00000530278 RNMTO43148 476 aaKnown RBP29.37■■■□□ 2.29
NFRKB-207ENST00000530278 PRKAR2BP31323 418 aa29.37■■■□□ 2.29
NFRKB-207ENST00000530278 RSPH6AQ9H0K4 717 aa29.37■■■□□ 2.29
NFRKB-207ENST00000530278 LINC00116Q8NCU8 138 aa29.36■■■□□ 2.29
NFRKB-207ENST00000530278 GAS2L2Q8NHY3 880 aa29.36■■■□□ 2.29
NFRKB-207ENST00000530278 SLC16A10Q8TF71 515 aa29.36■■■□□ 2.29
NFRKB-207ENST00000530278 ITPK1Q13572 414 aa29.35■■■□□ 2.29
NFRKB-207ENST00000530278 SLC52A2Q9HAB3 445 aa29.35■■■□□ 2.29
NFRKB-207ENST00000530278 COL23A1Q86Y22 540 aaPredicted RBP29.34■■■□□ 2.29
NFRKB-207ENST00000530278 RALBP1Q15311 655 aa29.33■■■□□ 2.29
NFRKB-207ENST00000530278 MAP3K5Q99683 1374 aa29.32■■■□□ 2.28
NFRKB-207ENST00000530278 PTCD1O75127 700 aaKnown RBP29.32■■■□□ 2.28
NFRKB-207ENST00000530278 PHACTR3Q96KR7 559 aa29.32■■■□□ 2.28
NFRKB-207ENST00000530278 SLC4A9Q96Q91 983 aa29.32■■■□□ 2.28
NFRKB-207ENST00000530278 SGIP1Q9BQI5 828 aa29.32■■■□□ 2.28
NFRKB-207ENST00000530278 ADAMTS7Q9UKP4 1686 aa29.31■■■□□ 2.28
NFRKB-207ENST00000530278 MRC1P22897 1456 aa29.31■■■□□ 2.28
NFRKB-207ENST00000530278 GNAT3A8MTJ3 354 aa29.3■■■□□ 2.28
NFRKB-207ENST00000530278 FCHSD2O94868 740 aa29.3■■■□□ 2.28
NFRKB-207ENST00000530278 PHF14O94880 888 aa29.3■■■□□ 2.28
NFRKB-207ENST00000530278 FLAD1Q8NFF5 587 aa29.3■■■□□ 2.28
NFRKB-207ENST00000530278 ZNF831Q5JPB2 1677 aa29.3■■■□□ 2.28
NFRKB-207ENST00000530278 UBR3Q6ZT12 1888 aa29.29■■■□□ 2.28
NFRKB-207ENST00000530278 SMIM5Q71RC9 77 aa29.29■■■□□ 2.28
NFRKB-207ENST00000530278 AMIGO3Q86WK7 504 aa29.28■■■□□ 2.28
NFRKB-207ENST00000530278 ARXQ96QS3 562 aa29.27■■■□□ 2.28
NFRKB-207ENST00000530278 GNPATO15228 680 aa29.26■■■□□ 2.27
NFRKB-207ENST00000530278 POLD1P28340 1107 aa29.26■■■□□ 2.27
NFRKB-207ENST00000530278 SLC39A6Q13433 755 aa29.26■■■□□ 2.27
NFRKB-207ENST00000530278 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.25■■■□□ 2.27
NFRKB-207ENST00000530278 IL17REQ8NFR9 667 aa29.25■■■□□ 2.27
NFRKB-207ENST00000530278 COL5A3P25940 1745 aaPredicted RBP29.25■■■□□ 2.27
NFRKB-207ENST00000530278 COL24A1Q17RW2 1714 aa29.25■■■□□ 2.27
NFRKB-207ENST00000530278 SSFA2P28290 1259 aa29.24■■■□□ 2.27
NFRKB-207ENST00000530278 MSL1Q68DK7 614 aa29.24■■■□□ 2.27
NFRKB-207ENST00000530278 TEFQ10587 303 aa29.23■■■□□ 2.27
NFRKB-207ENST00000530278 FHDC1Q9C0D6 1143 aaPredicted RBP29.23■■■□□ 2.27
NFRKB-207ENST00000530278 MYBBP1AQ9BQG0 1328 aaKnown RBP29.22■■■□□ 2.27
NFRKB-207ENST00000530278 TJP1Q07157 1748 aa29.2■■■□□ 2.27
NFRKB-207ENST00000530278 NEFMP07197 916 aa29.2■■■□□ 2.26
NFRKB-207ENST00000530278 RTCBQ9Y3I0 505 aaKnown RBP29.2■■■□□ 2.26
NFRKB-207ENST00000530278 CNTNAP4Q9C0A0 1308 aa29.2■■■□□ 2.26
NFRKB-207ENST00000530278 RC3H1Q5TC82 1133 aaKnown RBP29.19■■■□□ 2.26
NFRKB-207ENST00000530278 RTF1Q92541 710 aaKnown RBP29.18■■■□□ 2.26
NFRKB-207ENST00000530278 KCPQ6ZWJ8 1503 aa29.18■■■□□ 2.26
NFRKB-207ENST00000530278 CEMIPQ8WUJ3 1361 aa29.17■■■□□ 2.26
NFRKB-207ENST00000530278 CICQ96RK0 1608 aaPredicted RBP29.17■■■□□ 2.26
NFRKB-207ENST00000530278 SIPA1L3O60292 1781 aaPredicted RBP29.17■■■□□ 2.26
NFRKB-207ENST00000530278 KLHL34Q8N239 644 aa29.17■■■□□ 2.26
NFRKB-207ENST00000530278 SYT17Q9BSW7 474 aa29.17■■■□□ 2.26
NFRKB-207ENST00000530278 CRKLP46109 303 aaKnown RBP29.16■■■□□ 2.26
NFRKB-207ENST00000530278 TTC5Q8N0Z6 440 aa29.16■■■□□ 2.26
NFRKB-207ENST00000530278 TRAPPC3LQ5T215 181 aa29.15■■■□□ 2.26
NFRKB-207ENST00000530278 MCM10Q7L590 875 aa29.15■■■□□ 2.26
NFRKB-207ENST00000530278 DNAJC10Q8IXB1 793 aa29.15■■■□□ 2.26
NFRKB-207ENST00000530278 MYH14Q7Z406 1995 aaKnown RBP29.15■■■□□ 2.26
NFRKB-207ENST00000530278 UBR2Q8IWV8 1755 aa29.14■■■□□ 2.26
NFRKB-207ENST00000530278 PLEKHF1Q96S99 279 aa29.14■■■□□ 2.26
NFRKB-207ENST00000530278 PRKRIP1Q9H875 184 aaPredicted RBP29.14■■■□□ 2.26
NFRKB-207ENST00000530278 RPS6KA4O75676 772 aa29.13■■■□□ 2.25
NFRKB-207ENST00000530278 PNNQ9H307 717 aaKnown RBP29.13■■■□□ 2.25
NFRKB-207ENST00000530278 DCTN1Q14203 1278 aa29.12■■■□□ 2.25
NFRKB-207ENST00000530278 ZNF316A6NFI3 1004 aaPredicted RBP29.11■■■□□ 2.25
NFRKB-207ENST00000530278 ZNF790Q6PG37 636 aa29.11■■■□□ 2.25
NFRKB-207ENST00000530278 ARHGEF1Q92888 912 aaKnown RBP29.11■■■□□ 2.25
NFRKB-207ENST00000530278 MAPK8IP3Q9UPT6 1336 aa29.11■■■□□ 2.25
NFRKB-207ENST00000530278 BTBD11A6QL63 1104 aa29.1■■■□□ 2.25
NFRKB-207ENST00000530278 ADRA2BP18089 450 aa29.1■■■□□ 2.25
NFRKB-207ENST00000530278 DCAF8L1A6NGE4 600 aa29.09■■■□□ 2.25
NFRKB-207ENST00000530278 HTATSF1O43719 755 aaKnown RBP29.09■■■□□ 2.25
NFRKB-207ENST00000530278 VSIG10Q8N0Z9 540 aa29.09■■■□□ 2.25
NFRKB-207ENST00000530278 DLG5Q8TDM6 1919 aa29.09■■■□□ 2.25
NFRKB-207ENST00000530278 CYP19A1P11511 503 aaPredicted RBP29.08■■■□□ 2.25
NFRKB-207ENST00000530278 RFC4P35249 363 aa29.08■■■□□ 2.25
NFRKB-207ENST00000530278 INTS5Q6P9B9 1019 aaKnown RBP29.08■■■□□ 2.25
NFRKB-207ENST00000530278 ZNF496Q96IT1 587 aaPredicted RBP29.08■■■□□ 2.25
NFRKB-207ENST00000530278 CCDC87Q9NVE4 849 aa29.08■■■□□ 2.25
NFRKB-207ENST00000530278 NFE2L2Q16236 605 aa29.07■■■□□ 2.24
NFRKB-207ENST00000530278 C4AP0C0L4 1744 aa29.06■■■□□ 2.24
NFRKB-207ENST00000530278 HEG1Q9ULI3 1381 aa29.05■■■□□ 2.24
NFRKB-207ENST00000530278 KCNQ3O43525 872 aa29.05■■■□□ 2.24
NFRKB-207ENST00000530278 WDR43Q15061 677 aaKnown RBP eCLIP29.04■■■□□ 2.24
NFRKB-207ENST00000530278 FMNL2Q96PY5 1086 aa29.04■■■□□ 2.24
NFRKB-207ENST00000530278 NLGN2Q8NFZ4 835 aa29.02■■■□□ 2.24
NFRKB-207ENST00000530278 ZBTB1Q9Y2K1 713 aa29.02■■■□□ 2.24
NFRKB-207ENST00000530278 STARD3NLO95772 234 aa29.01■■■□□ 2.23
NFRKB-207ENST00000530278 GYS1P13807 737 aa29.01■■■□□ 2.23
NFRKB-207ENST00000530278 SOS1Q07889 1333 aaPredicted RBP29■■■□□ 2.23
NFRKB-207ENST00000530278 NLGN1Q8N2Q7 840 aa29■■■□□ 2.23
NFRKB-207ENST00000530278 SRP68Q9UHB9 627 aaKnown RBP29■■■□□ 2.23
NFRKB-207ENST00000530278 MMP10P09238 476 aa28.99■■■□□ 2.23
NFRKB-207ENST00000530278 TAF7Q15545 349 aaPredicted RBP28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 1067.5 ms