RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 APLP1P51693 650 aa15.77■□□□□ 0.12
SF3B2-208ENST00000529994 ARHGAP27Q6ZUM4 889 aa15.76■□□□□ 0.11
SF3B2-208ENST00000529994 CARD14Q9BXL6 1004 aa15.76■□□□□ 0.11
SF3B2-208ENST00000529994 NMRK2Q9NPI5 230 aa15.76■□□□□ 0.11
SF3B2-208ENST00000529994 ATG3Q9NT62 314 aa15.76■□□□□ 0.11
SF3B2-208ENST00000529994 TOMM70O94826 608 aa15.75■□□□□ 0.11
SF3B2-208ENST00000529994 EYA1Q99502 592 aa15.75■□□□□ 0.11
SF3B2-208ENST00000529994 NCAPD2Q15021 1401 aa15.75■□□□□ 0.11
SF3B2-208ENST00000529994 PHKG2P15735 406 aa15.74■□□□□ 0.11
SF3B2-208ENST00000529994 TRAPPC3LQ5T215 181 aa15.74■□□□□ 0.11
SF3B2-208ENST00000529994 DNAJC5GQ8N7S2 189 aa15.74■□□□□ 0.11
SF3B2-208ENST00000529994 FCHSD2O94868 740 aa15.73■□□□□ 0.11
SF3B2-208ENST00000529994 DPEP1P16444 411 aa15.73■□□□□ 0.11
SF3B2-208ENST00000529994 TGFB2P61812 414 aa15.73■□□□□ 0.11
SF3B2-208ENST00000529994 IFNL2Q8IZJ0 200 aa15.73■□□□□ 0.11
SF3B2-208ENST00000529994 RBM42Q9BTD8 480 aaKnown RBP15.73■□□□□ 0.11
SF3B2-208ENST00000529994 RTCBQ9Y3I0 505 aaKnown RBP15.73■□□□□ 0.11
SF3B2-208ENST00000529994 ANKRD26Q9UPS8 1709 aa15.73■□□□□ 0.11
SF3B2-208ENST00000529994 C10orf71Q711Q0 1435 aa15.72■□□□□ 0.11
SF3B2-208ENST00000529994 HTRA3P83110 453 aa15.72■□□□□ 0.11
SF3B2-208ENST00000529994 SLC4A9Q96Q91 983 aa15.72■□□□□ 0.11
SF3B2-208ENST00000529994 BRCA1P38398 1863 aaKnown RBP15.71■□□□□ 0.11
SF3B2-208ENST00000529994 C4AP0C0L4 1744 aa15.71■□□□□ 0.11
SF3B2-208ENST00000529994 WASHC2AQ641Q2 1341 aa15.71■□□□□ 0.11
SF3B2-208ENST00000529994 NLGN1Q8N2Q7 840 aa15.71■□□□□ 0.11
SF3B2-208ENST00000529994 ARHGEF1Q92888 912 aaKnown RBP15.71■□□□□ 0.11
SF3B2-208ENST00000529994 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.71■□□□□ 0.111e-8■■□□□ 13.2
SF3B2-208ENST00000529994 WDR90Q96KV7 1748 aa15.71■□□□□ 0.1
SF3B2-208ENST00000529994 CDCA8Q53HL2 280 aa15.7■□□□□ 0.1
SF3B2-208ENST00000529994 CCDC87Q9NVE4 849 aa15.7■□□□□ 0.1
SF3B2-208ENST00000529994 KDRP35968 1356 aa15.7■□□□□ 0.1
SF3B2-208ENST00000529994 MYH14Q7Z406 1995 aaKnown RBP15.69■□□□□ 0.1
SF3B2-208ENST00000529994 COL5A3P25940 1745 aaPredicted RBP15.69■□□□□ 0.1
SF3B2-208ENST00000529994 GYS1P13807 737 aa15.69■□□□□ 0.1
SF3B2-208ENST00000529994 RFC4P35249 363 aa15.69■□□□□ 0.1
SF3B2-208ENST00000529994 TNNT2P45379 298 aaPredicted RBP15.69■□□□□ 0.1
SF3B2-208ENST00000529994 C9orf131Q5VYM1 1079 aa15.69■□□□□ 0.1
SF3B2-208ENST00000529994 PARP3Q9Y6F1 533 aa15.69■□□□□ 0.1
SF3B2-208ENST00000529994 ARFGEF1Q9Y6D6 1849 aa15.68■□□□□ 0.1
SF3B2-208ENST00000529994 C16orf71Q8IYS4 520 aaPredicted RBP15.68■□□□□ 0.1
SF3B2-208ENST00000529994 POLKQ9UBT6 870 aa15.68■□□□□ 0.1
SF3B2-208ENST00000529994 KCNA3P22001 575 aa15.67■□□□□ 0.1
SF3B2-208ENST00000529994 EIF4A2Q14240 407 aaKnown RBP15.67■□□□□ 0.1
SF3B2-208ENST00000529994 RPS6KA4O75676 772 aa15.66■□□□□ 0.1
SF3B2-208ENST00000529994 RC3H1Q5TC82 1133 aaKnown RBP15.66■□□□□ 0.1
SF3B2-208ENST00000529994 RBM46Q8TBY0 533 aaKnown RBP15.66■□□□□ 0.1
SF3B2-208ENST00000529994 KCPQ6ZWJ8 1503 aa15.66■□□□□ 0.1
SF3B2-208ENST00000529994 CNTNAP4Q9C0A0 1308 aa15.66■□□□□ 0.1
SF3B2-208ENST00000529994 ZNF831Q5JPB2 1677 aa15.65■□□□□ 0.1
SF3B2-208ENST00000529994 ADRA2BP18089 450 aa15.65■□□□□ 0.1
SF3B2-208ENST00000529994 SRP68Q9UHB9 627 aaKnown RBP15.65■□□□□ 0.1
SF3B2-208ENST00000529994 ERVV-2B6SEH9 535 aa15.64■□□□□ 0.09
SF3B2-208ENST00000529994 PTCD1O75127 700 aaKnown RBP15.64■□□□□ 0.09
SF3B2-208ENST00000529994 CAPN15O75808 1086 aa15.64■□□□□ 0.09
SF3B2-208ENST00000529994 CABP4P57796 275 aa15.64■□□□□ 0.09
SF3B2-208ENST00000529994 COL13A1Q5TAT6 717 aaPredicted RBP15.64■□□□□ 0.09
SF3B2-208ENST00000529994 KLRG1Q96E93 195 aa15.64■□□□□ 0.09
SF3B2-208ENST00000529994 DCAF5Q96JK2 942 aa15.64■□□□□ 0.09
SF3B2-208ENST00000529994 POLR3GLQ9BT43 218 aa15.64■□□□□ 0.09
SF3B2-208ENST00000529994 RRAGCQ9HB90 399 aa15.64■□□□□ 0.09
SF3B2-208ENST00000529994 RNF181Q9P0P0 153 aa15.64■□□□□ 0.09
SF3B2-208ENST00000529994 PIM2Q9P1W9 311 aa15.64■□□□□ 0.09
SF3B2-208ENST00000529994 SBF1O95248 1867 aa15.63■□□□□ 0.09
SF3B2-208ENST00000529994 CHRNA5P30532 468 aa15.63■□□□□ 0.09
SF3B2-208ENST00000529994 ZNF530Q6P9A1 599 aaPredicted RBP15.63■□□□□ 0.09
SF3B2-208ENST00000529994 CCER1Q8TC90 406 aaPredicted RBP15.63■□□□□ 0.09
SF3B2-208ENST00000529994 PLEKHG2Q9H7P9 1386 aa15.62■□□□□ 0.09
SF3B2-208ENST00000529994 KDM6AO15550 1401 aaPredicted RBP15.62■□□□□ 0.09
SF3B2-208ENST00000529994 PCNTO95613 3336 aa15.62■□□□□ 0.09
SF3B2-208ENST00000529994 DDR1Q08345 913 aa15.62■□□□□ 0.09
SF3B2-208ENST00000529994 FKBP8Q14318 412 aa15.62■□□□□ 0.09
SF3B2-208ENST00000529994 DALRD3Q5D0E6 543 aaKnown RBP15.62■□□□□ 0.09
SF3B2-208ENST00000529994 HSP90AB1P08238 724 aaKnown RBP15.61■□□□□ 0.09
SF3B2-208ENST00000529994 CRKLP46109 303 aaKnown RBP15.61■□□□□ 0.09
SF3B2-208ENST00000529994 FSTL1Q12841 308 aa15.61■□□□□ 0.09
SF3B2-208ENST00000529994 PLEKHO1Q53GL0 409 aaPredicted RBP15.61■□□□□ 0.09
SF3B2-208ENST00000529994 KDM2BQ8NHM5 1336 aa15.61■□□□□ 0.09
SF3B2-208ENST00000529994 MTHFSP49914 203 aa15.59■□□□□ 0.09
SF3B2-208ENST00000529994 JMYQ8N9B5 988 aa15.59■□□□□ 0.09
SF3B2-208ENST00000529994 NFATC2IPQ8NCF5 419 aa15.59■□□□□ 0.09
SF3B2-208ENST00000529994 TNRC6CQ9HCJ0 1690 aaKnown RBP15.59■□□□□ 0.09
SF3B2-208ENST00000529994 USP42Q9H9J4 1324 aaKnown RBP15.59■□□□□ 0.09
SF3B2-208ENST00000529994 TJP1Q07157 1748 aa15.58■□□□□ 0.08
SF3B2-208ENST00000529994 RASSF7Q02833 373 aa15.58■□□□□ 0.08
SF3B2-208ENST00000529994 AEBP1Q8IUX7 1158 aa15.58■□□□□ 0.08
SF3B2-208ENST00000529994 C1orf141Q5JVX7 400 aa15.57■□□□□ 0.08
SF3B2-208ENST00000529994 CLSPNQ9HAW4 1339 aa15.57■□□□□ 0.08
SF3B2-208ENST00000529994 POLRMTO00411 1230 aaKnown RBP15.56■□□□□ 0.08
SF3B2-208ENST00000529994 AMOTQ4VCS5 1084 aa15.56■□□□□ 0.08
SF3B2-208ENST00000529994 INTS5Q6P9B9 1019 aaKnown RBP15.56■□□□□ 0.08
SF3B2-208ENST00000529994 TNS4Q8IZW8 715 aa15.56■□□□□ 0.08
SF3B2-208ENST00000529994 CCDC88AQ3V6T2 1871 aa15.56■□□□□ 0.08
SF3B2-208ENST00000529994 AFDNP55196 1824 aaKnown RBP15.55■□□□□ 0.08
SF3B2-208ENST00000529994 ADAMTS7Q9UKP4 1686 aa15.55■□□□□ 0.08
SF3B2-208ENST00000529994 USPL1Q5W0Q7 1092 aa15.55■□□□□ 0.08
SF3B2-208ENST00000529994 SMC1BQ8NDV3 1235 aa15.55■□□□□ 0.08
SF3B2-208ENST00000529994 ZPR1O75312 459 aa15.54■□□□□ 0.08
SF3B2-208ENST00000529994 TM4SF1P30408 202 aa15.54■□□□□ 0.08
SF3B2-208ENST00000529994 DNAJC10Q8IXB1 793 aa15.54■□□□□ 0.08
SF3B2-208ENST00000529994 SCN11AQ9UI33 1791 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms