RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 DDX54Q8TDD1 881 aaKnown RBP18.68■□□□□ 0.58
NR1H3-231ENST00000529540 IFT57Q9NWB7 429 aa18.68■□□□□ 0.58
NR1H3-231ENST00000529540 SHANK3Q9BYB0 1731 aa18.67■□□□□ 0.58
NR1H3-231ENST00000529540 RNMTO43148 476 aaKnown RBP18.67■□□□□ 0.58
NR1H3-231ENST00000529540 TEFQ10587 303 aa18.67■□□□□ 0.58
NR1H3-231ENST00000529540 MCM10Q7L590 875 aa18.67■□□□□ 0.58
NR1H3-231ENST00000529540 CFAP44Q96MT7 982 aa18.66■□□□□ 0.58
NR1H3-231ENST00000529540 SLFN5Q08AF3 891 aa18.66■□□□□ 0.58
NR1H3-231ENST00000529540 MPRIPQ6WCQ1 1025 aa18.66■□□□□ 0.58
NR1H3-231ENST00000529540 IL17REQ8NFR9 667 aa18.66■□□□□ 0.58
NR1H3-231ENST00000529540 CDCA7LQ96GN5 454 aa18.66■□□□□ 0.58
NR1H3-231ENST00000529540 ERVV-2B6SEH9 535 aa18.65■□□□□ 0.58
NR1H3-231ENST00000529540 DCTN1Q14203 1278 aa18.65■□□□□ 0.58
NR1H3-231ENST00000529540 DDRGK1Q96HY6 314 aa18.65■□□□□ 0.58
NR1H3-231ENST00000529540 RXRBP28702 533 aa18.64■□□□□ 0.57
NR1H3-231ENST00000529540 KDM6AO15550 1401 aaPredicted RBP18.64■□□□□ 0.57
NR1H3-231ENST00000529540 MRC1P22897 1456 aa18.64■□□□□ 0.57
NR1H3-231ENST00000529540 SCN11AQ9UI33 1791 aa18.64■□□□□ 0.57
NR1H3-231ENST00000529540 TAF7Q15545 349 aaPredicted RBP18.63■□□□□ 0.57
NR1H3-231ENST00000529540 CRBNQ96SW2 442 aa18.63■□□□□ 0.57
NR1H3-231ENST00000529540 SEPT12Q8IYM1 358 aa18.63■□□□□ 0.57
NR1H3-231ENST00000529540 THUMPD2Q9BTF0 503 aaKnown RBP18.63■□□□□ 0.57
NR1H3-231ENST00000529540 ZNF853P0CG23 659 aa18.62■□□□□ 0.57
NR1H3-231ENST00000529540 NPM2Q86SE8 214 aaKnown RBP18.62■□□□□ 0.57
NR1H3-231ENST00000529540 TRMT2AQ8IZ69 625 aaKnown RBP18.62■□□□□ 0.57
NR1H3-231ENST00000529540 SLC52A2Q9HAB3 445 aa18.62■□□□□ 0.57
NR1H3-231ENST00000529540 LGR6Q9HBX8 967 aa18.62■□□□□ 0.57
NR1H3-231ENST00000529540 KDM2BQ8NHM5 1336 aa18.61■□□□□ 0.57
NR1H3-231ENST00000529540 CABP4P57796 275 aa18.61■□□□□ 0.57
NR1H3-231ENST00000529540 BCL9O00512 1426 aa18.61■□□□□ 0.57
NR1H3-231ENST00000529540 CHL1O00533 1208 aa18.6■□□□□ 0.57
NR1H3-231ENST00000529540 DUSP27Q5VZP5 1158 aa18.6■□□□□ 0.57
NR1H3-231ENST00000529540 LAS1LQ9Y4W2 734 aaKnown RBP18.6■□□□□ 0.57
NR1H3-231ENST00000529540 TSPYL4Q9UJ04 414 aa18.6■□□□□ 0.57
NR1H3-231ENST00000529540 VIRMAQ69YN4 1812 aaKnown RBP18.59■□□□□ 0.57
NR1H3-231ENST00000529540 CT47B1P0C2W7 299 aaPredicted RBP18.59■□□□□ 0.57
NR1H3-231ENST00000529540 MARCH10Q8NA82 808 aaPredicted RBP18.59■□□□□ 0.57
NR1H3-231ENST00000529540 BTBD11A6QL63 1104 aa18.58■□□□□ 0.57
NR1H3-231ENST00000529540 RGS17Q9UGC6 210 aaPredicted RBP18.58■□□□□ 0.57
NR1H3-231ENST00000529540 SPINK5Q9NQ38 1064 aaPredicted RBP18.57■□□□□ 0.56
NR1H3-231ENST00000529540 MBIPQ9NS73 344 aa18.57■□□□□ 0.56
NR1H3-231ENST00000529540 TMOD3Q9NYL9 352 aa18.57■□□□□ 0.56
NR1H3-231ENST00000529540 SOS1Q07889 1333 aaPredicted RBP18.57■□□□□ 0.56
NR1H3-231ENST00000529540 CENPQQ7L2Z9 268 aaPredicted RBP18.57■□□□□ 0.56
NR1H3-231ENST00000529540 NFATC2IPQ8NCF5 419 aa18.57■□□□□ 0.56
NR1H3-231ENST00000529540 CHMP4AQ9BY43 222 aa18.57■□□□□ 0.56
NR1H3-231ENST00000529540 SIPA1L3O60292 1781 aaPredicted RBP18.56■□□□□ 0.56
NR1H3-231ENST00000529540 PLIN1O60240 522 aa18.56■□□□□ 0.56
NR1H3-231ENST00000529540 KRT27Q7Z3Y8 459 aa18.55■□□□□ 0.56
NR1H3-231ENST00000529540 ZNF428Q96B54 188 aa18.55■□□□□ 0.56
NR1H3-231ENST00000529540 TTC5Q8N0Z6 440 aa18.54■□□□□ 0.56
NR1H3-231ENST00000529540 TSR2Q969E8 191 aaKnown RBP18.54■□□□□ 0.56
NR1H3-231ENST00000529540 TOGARAM1Q9Y4F4 1720 aa18.54■□□□□ 0.56
NR1H3-231ENST00000529540 POTEAQ6S8J7 498 aa18.54■□□□□ 0.56
NR1H3-231ENST00000529540 DOT1LQ8TEK3 1739 aa18.53■□□□□ 0.56
NR1H3-231ENST00000529540 KDM3BQ7LBC6 1761 aa18.53■□□□□ 0.56
NR1H3-231ENST00000529540 ZNF790Q6PG37 636 aa18.53■□□□□ 0.56
NR1H3-231ENST00000529540 FAM196AQ6ZSG2 479 aa18.53■□□□□ 0.56
NR1H3-231ENST00000529540 HOXB7P09629 217 aa18.51■□□□□ 0.55
NR1H3-231ENST00000529540 SYTL4Q96C24 671 aaPredicted RBP18.51■□□□□ 0.55
NR1H3-231ENST00000529540 RGS12O14924 1447 aa18.51■□□□□ 0.55
NR1H3-231ENST00000529540 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.5■□□□□ 0.55
NR1H3-231ENST00000529540 PRIM1P49642 420 aaKnown RBP18.5■□□□□ 0.55
NR1H3-231ENST00000529540 EXOSC9Q06265 439 aaKnown RBP18.5■□□□□ 0.55
NR1H3-231ENST00000529540 MIS18AQ9NYP9 233 aa18.5■□□□□ 0.55
NR1H3-231ENST00000529540 C20orf194Q5TEA3 1177 aa18.49■□□□□ 0.55
NR1H3-231ENST00000529540 PIGBQ92521 554 aa18.49■□□□□ 0.55
NR1H3-231ENST00000529540 FMNL2Q96PY5 1086 aa18.49■□□□□ 0.55
NR1H3-231ENST00000529540 ITGB4P16144 1822 aa18.49■□□□□ 0.55
NR1H3-231ENST00000529540 PAPPAQ13219 1627 aa18.48■□□□□ 0.55
NR1H3-231ENST00000529540 NHSQ6T4R5 1651 aa18.48■□□□□ 0.55
NR1H3-231ENST00000529540 EIF4A1P60842 406 aaKnown RBP18.48■□□□□ 0.55
NR1H3-231ENST00000529540 TWISTNBQ3B726 338 aaPredicted RBP18.48■□□□□ 0.55
NR1H3-231ENST00000529540 SMARCC1Q92922 1105 aaPredicted RBP18.48■□□□□ 0.55
NR1H3-231ENST00000529540 BRWD3Q6RI45 1802 aa18.47■□□□□ 0.55
NR1H3-231ENST00000529540 FAM161AQ3B820 660 aa18.47■□□□□ 0.55
NR1H3-231ENST00000529540 ACSBG1Q96GR2 724 aa18.47■□□□□ 0.55
NR1H3-231ENST00000529540 HEG1Q9ULI3 1381 aa18.46■□□□□ 0.55
NR1H3-231ENST00000529540 VSIG10Q8N0Z9 540 aa18.45■□□□□ 0.54
NR1H3-231ENST00000529540 HMGB2P26583 209 aaKnown RBP18.44■□□□□ 0.54
NR1H3-231ENST00000529540 SLC39A6Q13433 755 aa18.44■□□□□ 0.54
NR1H3-231ENST00000529540 ALDH1L2Q3SY69 923 aa18.44■□□□□ 0.54
NR1H3-231ENST00000529540 TEX13AQ9BXU3 409 aaPredicted RBP18.44■□□□□ 0.54
NR1H3-231ENST00000529540 BCL11BQ9C0K0 894 aaPredicted RBP18.44■□□□□ 0.54
NR1H3-231ENST00000529540 UBR2Q8IWV8 1755 aa18.44■□□□□ 0.54
NR1H3-231ENST00000529540 VAMP4O75379 141 aa18.44■□□□□ 0.54
NR1H3-231ENST00000529540 SNRPA1P09661 255 aaKnown RBP18.44■□□□□ 0.54
NR1H3-231ENST00000529540 C8orf58Q8NAV2 365 aa18.44■□□□□ 0.54
NR1H3-231ENST00000529540 ATG3Q9NT62 314 aa18.44■□□□□ 0.54
NR1H3-231ENST00000529540 GIGYF1O75420 1035 aaPredicted RBP18.43■□□□□ 0.54
NR1H3-231ENST00000529540 C8orf34Q49A92 452 aa18.43■□□□□ 0.54
NR1H3-231ENST00000529540 ZNF496Q96IT1 587 aaPredicted RBP18.43■□□□□ 0.54
NR1H3-231ENST00000529540 KCPQ6ZWJ8 1503 aa18.42■□□□□ 0.54
NR1H3-231ENST00000529540 CCDC30Q5VVM6 783 aa18.42■□□□□ 0.54
NR1H3-231ENST00000529540 SBF2Q86WG5 1849 aa18.42■□□□□ 0.54
NR1H3-231ENST00000529540 KCNQ3O43525 872 aa18.41■□□□□ 0.54
NR1H3-231ENST00000529540 SKAP1Q86WV1 359 aa18.41■□□□□ 0.54
NR1H3-231ENST00000529540 TSPYL6Q8N831 410 aa18.41■□□□□ 0.54
NR1H3-231ENST00000529540 ASAP1Q9ULH1 1129 aa18.41■□□□□ 0.54
NR1H3-231ENST00000529540 KCNQ2O43526 872 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms