RNA–Protein interactions for RNA: ENST00000529173.5

RPS3-212, Transcript of ribosomal protein S3, humanhuman

TSL 5

Gene RPS3, Length 1,373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-212ENST00000529173 CHD1LQ86WJ1 897 aa16.61■□□□□ 0.25
RPS3-212ENST00000529173 LRRC59Q96AG4 307 aaKnown RBP16.61■□□□□ 0.25
RPS3-212ENST00000529173 DAXXQ9UER7 740 aaPredicted RBP16.61■□□□□ 0.25
RPS3-212ENST00000529173 SPG7Q9UQ90 795 aa16.61■□□□□ 0.25
RPS3-212ENST00000529173 RGPD5Q99666 1765 aa16.6■□□□□ 0.25
RPS3-212ENST00000529173 HDGFL1Q5TGJ6 251 aa16.6■□□□□ 0.25
RPS3-212ENST00000529173 MIS18AQ9NYP9 233 aa16.6■□□□□ 0.25
RPS3-212ENST00000529173 RNMTO43148 476 aaKnown RBP16.59■□□□□ 0.25
RPS3-212ENST00000529173 HSP90AB1P08238 724 aaKnown RBP16.59■□□□□ 0.25
RPS3-212ENST00000529173 GNAI3P08754 354 aa16.59■□□□□ 0.25
RPS3-212ENST00000529173 FLIIQ13045 1269 aa16.59■□□□□ 0.25
RPS3-212ENST00000529173 BRINP3Q76B58 766 aa16.59■□□□□ 0.25
RPS3-212ENST00000529173 ANKRD44Q8N8A2 993 aa16.59■□□□□ 0.25
RPS3-212ENST00000529173 BTBD11A6QL63 1104 aa16.58■□□□□ 0.24
RPS3-212ENST00000529173 ZC3H6P61129 1189 aaKnown RBP16.58■□□□□ 0.24
RPS3-212ENST00000529173 SOS2Q07890 1332 aaPredicted RBP16.58■□□□□ 0.24
RPS3-212ENST00000529173 SIPA1L3O60292 1781 aaPredicted RBP16.58■□□□□ 0.24
RPS3-212ENST00000529173 PKD1L3Q7Z443 1732 aa16.57■□□□□ 0.24
RPS3-212ENST00000529173 CSB-PGBD3P0DP91 1061 aa16.57■□□□□ 0.24
RPS3-212ENST00000529173 FKBP5Q13451 457 aaPredicted RBP16.57■□□□□ 0.24
RPS3-212ENST00000529173 ATP10DQ9P241 1426 aa16.57■□□□□ 0.24
RPS3-212ENST00000529173 EIF4A1P60842 406 aaKnown RBP16.56■□□□□ 0.24
RPS3-212ENST00000529173 NLRP2Q9NX02 1062 aa16.56■□□□□ 0.24
RPS3-212ENST00000529173 SLAIN2Q9P270 581 aa16.56■□□□□ 0.24
RPS3-212ENST00000529173 NHSL1Q5SYE7 1610 aa16.56■□□□□ 0.24
RPS3-212ENST00000529173 PARP4Q9UKK3 1724 aaKnown RBP16.56■□□□□ 0.24
RPS3-212ENST00000529173 BMP2KLQ5H9B9 411 aa16.55■□□□□ 0.24
RPS3-212ENST00000529173 DCTPP1Q9H773 170 aa16.55■□□□□ 0.24
RPS3-212ENST00000529173 SCN11AQ9UI33 1791 aa16.55■□□□□ 0.24
RPS3-212ENST00000529173 HDAC5Q9UQL6 1122 aa16.55■□□□□ 0.24
RPS3-212ENST00000529173 AXIN2Q9Y2T1 843 aa16.55■□□□□ 0.24
RPS3-212ENST00000529173 MRC1P22897 1456 aa16.54■□□□□ 0.24
RPS3-212ENST00000529173 GNAI2P04899 355 aa16.54■□□□□ 0.24
RPS3-212ENST00000529173 ANKRD45Q5TZF3 282 aa16.54■□□□□ 0.24
RPS3-212ENST00000529173 CEP85Q6P2H3 762 aa16.53■□□□□ 0.24
RPS3-212ENST00000529173 IFNL2Q8IZJ0 200 aa16.53■□□□□ 0.24
RPS3-212ENST00000529173 C1orf115Q9H7X2 142 aa16.53■□□□□ 0.24
RPS3-212ENST00000529173 ZNF335Q9H4Z2 1342 aaPredicted RBP16.53■□□□□ 0.24
RPS3-212ENST00000529173 ABCA3Q99758 1704 aa16.52■□□□□ 0.24
RPS3-212ENST00000529173 BECN1Q14457 450 aa16.52■□□□□ 0.24
RPS3-212ENST00000529173 SLC4A10Q6U841 1118 aa16.52■□□□□ 0.24
RPS3-212ENST00000529173 MPRIPQ6WCQ1 1025 aa16.52■□□□□ 0.24
RPS3-212ENST00000529173 LNPKQ9C0E8 428 aa16.52■□□□□ 0.24
RPS3-212ENST00000529173 LGR6Q9HBX8 967 aa16.52■□□□□ 0.24
RPS3-212ENST00000529173 DBF4Q9UBU7 674 aaPredicted RBP16.52■□□□□ 0.24
RPS3-212ENST00000529173 HEG1Q9ULI3 1381 aa16.51■□□□□ 0.23
RPS3-212ENST00000529173 PLEKHG5O94827 1062 aa16.51■□□□□ 0.23
RPS3-212ENST00000529173 G2E3Q7L622 706 aa16.51■□□□□ 0.23
RPS3-212ENST00000529173 SIRT2Q8IXJ6 389 aa16.51■□□□□ 0.23
RPS3-212ENST00000529173 DCAF5Q96JK2 942 aa16.51■□□□□ 0.23
RPS3-212ENST00000529173 MEIS3Q99687 375 aa16.51■□□□□ 0.23
RPS3-212ENST00000529173 PRDM11Q9NQV5 511 aa16.51■□□□□ 0.23
RPS3-212ENST00000529173 WDR17Q8IZU2 1322 aa16.5■□□□□ 0.23
RPS3-212ENST00000529173 MEGF6O75095 1541 aa16.5■□□□□ 0.23
RPS3-212ENST00000529173 PHKG2P15735 406 aa16.5■□□□□ 0.23
RPS3-212ENST00000529173 IBTKQ9P2D0 1353 aaPredicted RBP16.49■□□□□ 0.23
RPS3-212ENST00000529173 DDX17Q92841 729 aaKnown RBP16.49■□□□□ 0.23
RPS3-212ENST00000529173 SLC52A2Q9HAB3 445 aa16.49■□□□□ 0.23
RPS3-212ENST00000529173 HYPKQ9NX55 129 aa16.49■□□□□ 0.23
RPS3-212ENST00000529173 DDX58O95786 925 aaKnown RBP16.48■□□□□ 0.23
RPS3-212ENST00000529173 TBC1D32Q96NH3 1257 aa16.48■□□□□ 0.23
RPS3-212ENST00000529173 SRCIN1Q9C0H9 1055 aa16.48■□□□□ 0.23
RPS3-212ENST00000529173 COL5A2P05997 1499 aaPredicted RBP16.47■□□□□ 0.23
RPS3-212ENST00000529173 PCDH11XQ9BZA7 1347 aa16.47■□□□□ 0.23
RPS3-212ENST00000529173 PCDH11YQ9BZA8 1340 aa16.47■□□□□ 0.23
RPS3-212ENST00000529173 F6X3S4 739 aa16.47■□□□□ 0.23
RPS3-212ENST00000529173 UBTFL1P0CB47 393 aaPredicted RBP16.47■□□□□ 0.23
RPS3-212ENST00000529173 KDM6AO15550 1401 aaPredicted RBP16.46■□□□□ 0.23
RPS3-212ENST00000529173 GIGYF1O75420 1035 aaPredicted RBP16.46■□□□□ 0.23
RPS3-212ENST00000529173 EIF2S2P20042 333 aaKnown RBP16.46■□□□□ 0.23
RPS3-212ENST00000529173 CABLES1Q8TDN4 633 aa16.46■□□□□ 0.23
RPS3-212ENST00000529173 DNAAF4Q8WXU2 420 aa16.46■□□□□ 0.23
RPS3-212ENST00000529173 ALDH1L1O75891 902 aa16.45■□□□□ 0.22
RPS3-212ENST00000529173 CASC1Q6TDU7 716 aa16.45■□□□□ 0.22
RPS3-212ENST00000529173 TTC5Q8N0Z6 440 aa16.45■□□□□ 0.22
RPS3-212ENST00000529173 NECTIN2Q92692 538 aa16.45■□□□□ 0.22
RPS3-212ENST00000529173 CHPF2Q9P2E5 772 aa16.45■□□□□ 0.22
RPS3-212ENST00000529173 CHRNA2Q15822 529 aa16.44■□□□□ 0.22
RPS3-212ENST00000529173 ZNF790Q6PG37 636 aa16.44■□□□□ 0.22
RPS3-212ENST00000529173 CARD10Q9BWT7 1032 aa16.44■□□□□ 0.22
RPS3-212ENST00000529173 LAMB4A4D0S4 1761 aa16.43■□□□□ 0.22
RPS3-212ENST00000529173 CDC45O75419 566 aa16.43■□□□□ 0.22
RPS3-212ENST00000529173 ATP8B2P98198 1209 aa16.43■□□□□ 0.22
RPS3-212ENST00000529173 TOM1L2Q6ZVM7 507 aa16.43■□□□□ 0.22
RPS3-212ENST00000529173 DDX21Q9NR30 783 aaKnown RBP eCLIP16.43■□□□□ 0.225e-35■□□□□ 8.5
RPS3-212ENST00000529173 AHDC1Q5TGY3 1603 aaPredicted RBP16.43■□□□□ 0.22
RPS3-212ENST00000529173 HSP90AB4PQ58FF6 505 aa16.42■□□□□ 0.22
RPS3-212ENST00000529173 C22orf23Q9BZE7 217 aa16.42■□□□□ 0.22
RPS3-212ENST00000529173 ERBB4Q15303 1308 aa16.42■□□□□ 0.22
RPS3-212ENST00000529173 RAB11FIP3O75154 756 aa16.41■□□□□ 0.22
RPS3-212ENST00000529173 KSR2Q6VAB6 950 aa16.41■□□□□ 0.22
RPS3-212ENST00000529173 FMNL2Q96PY5 1086 aa16.41■□□□□ 0.22
RPS3-212ENST00000529173 COL14A1Q05707 1796 aaKnown RBP16.41■□□□□ 0.22
RPS3-212ENST00000529173 KCNQ3O43525 872 aa16.4■□□□□ 0.22
RPS3-212ENST00000529173 SNRPA1P09661 255 aaKnown RBP16.4■□□□□ 0.22
RPS3-212ENST00000529173 CABP4P57796 275 aa16.4■□□□□ 0.22
RPS3-212ENST00000529173 TTC22Q5TAA0 569 aa16.4■□□□□ 0.22
RPS3-212ENST00000529173 PLEKHM2Q8IWE5 1019 aa16.4■□□□□ 0.22
RPS3-212ENST00000529173 ZCRB1Q8TBF4 217 aaKnown RBP16.4■□□□□ 0.22
RPS3-212ENST00000529173 LRRCC1Q9C099 1032 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms