RNA–Protein interactions for RNA: ENST00000528575.1

YIF1A-212, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 3

Gene YIF1A, Length 532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-212ENST00000528575 LINC00116Q8NCU8 138 aa25.08■■□□□ 1.61
YIF1A-212ENST00000528575 ITPK1Q13572 414 aa25.07■■□□□ 1.6
YIF1A-212ENST00000528575 AEBP1Q8IUX7 1158 aa25.07■■□□□ 1.6
YIF1A-212ENST00000528575 KDM6AO15550 1401 aaPredicted RBP25.06■■□□□ 1.6
YIF1A-212ENST00000528575 SLC4A9Q96Q91 983 aa25.06■■□□□ 1.6
YIF1A-212ENST00000528575 ZNF784Q8NCA9 323 aaPredicted RBP25.05■■□□□ 1.6
YIF1A-212ENST00000528575 ATG3Q9NT62 314 aa25.05■■□□□ 1.6
YIF1A-212ENST00000528575 LOC102724428A0A0B4J2F2 783 aa25.04■■□□□ 1.6
YIF1A-212ENST00000528575 POLD1P28340 1107 aa25.04■■□□□ 1.6
YIF1A-212ENST00000528575 SIK1P57059 783 aa25.04■■□□□ 1.6
YIF1A-212ENST00000528575 DCAF5Q96JK2 942 aa25.04■■□□□ 1.6
YIF1A-212ENST00000528575 DCAF8L1A6NGE4 600 aa25.03■■□□□ 1.6
YIF1A-212ENST00000528575 C1orf141Q5JVX7 400 aa25.03■■□□□ 1.6
YIF1A-212ENST00000528575 SMARCC1Q92922 1105 aaPredicted RBP25.03■■□□□ 1.6
YIF1A-212ENST00000528575 ZNF316A6NFI3 1004 aaPredicted RBP25.02■■□□□ 1.6
YIF1A-212ENST00000528575 YBX3P16989 372 aaKnown RBP eCLIP25.02■■□□□ 1.64e-6■□□□□ 10.1
YIF1A-212ENST00000528575 KLHL34Q8N239 644 aa25.02■■□□□ 1.6
YIF1A-212ENST00000528575 ERVV-2B6SEH9 535 aa25.01■■□□□ 1.59
YIF1A-212ENST00000528575 U2SURPO15042 1029 aaKnown RBP25.01■■□□□ 1.59
YIF1A-212ENST00000528575 ZNF530Q6P9A1 599 aaPredicted RBP25.01■■□□□ 1.59
YIF1A-212ENST00000528575 MSH5O43196 834 aa25■■□□□ 1.59
YIF1A-212ENST00000528575 TMOD3Q9NYL9 352 aa25■■□□□ 1.59
YIF1A-212ENST00000528575 HMOX1P09601 288 aa24.99■■□□□ 1.59
YIF1A-212ENST00000528575 AKAP4Q5JQC9 854 aa24.99■■□□□ 1.59
YIF1A-212ENST00000528575 MYBBP1AQ9BQG0 1328 aaKnown RBP24.98■■□□□ 1.59
YIF1A-212ENST00000528575 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.98■■□□□ 1.59
YIF1A-212ENST00000528575 COL5A3P25940 1745 aaPredicted RBP24.98■■□□□ 1.59
YIF1A-212ENST00000528575 ZNF831Q5JPB2 1677 aa24.97■■□□□ 1.59
YIF1A-212ENST00000528575 FCHSD2O94868 740 aa24.97■■□□□ 1.59
YIF1A-212ENST00000528575 PHF14O94880 888 aa24.96■■□□□ 1.59
YIF1A-212ENST00000528575 GPR162Q16538 588 aa24.96■■□□□ 1.59
YIF1A-212ENST00000528575 GAS2L2Q8NHY3 880 aa24.95■■□□□ 1.58
YIF1A-212ENST00000528575 AK7Q96M32 723 aa24.95■■□□□ 1.58
YIF1A-212ENST00000528575 MYH14Q7Z406 1995 aaKnown RBP24.94■■□□□ 1.58
YIF1A-212ENST00000528575 U2AF1L5P0DN76 240 aaPredicted RBP24.93■■□□□ 1.58
YIF1A-212ENST00000528575 ATP6V1AP38606 617 aa24.93■■□□□ 1.58
YIF1A-212ENST00000528575 U2AF1Q01081 240 aaKnown RBP eCLIP24.93■■□□□ 1.58
YIF1A-212ENST00000528575 FLAD1Q8NFF5 587 aa24.93■■□□□ 1.58
YIF1A-212ENST00000528575 RSPH6AQ9H0K4 717 aa24.93■■□□□ 1.58
YIF1A-212ENST00000528575 PNNQ9H307 717 aaKnown RBP24.93■■□□□ 1.58
YIF1A-212ENST00000528575 SSFA2P28290 1259 aa24.92■■□□□ 1.58
YIF1A-212ENST00000528575 PRKRIP1Q9H875 184 aaPredicted RBP24.91■■□□□ 1.58
YIF1A-212ENST00000528575 KIAA1551Q9HCM1 1747 aa24.91■■□□□ 1.58
YIF1A-212ENST00000528575 GNPATO15228 680 aa24.9■■□□□ 1.58
YIF1A-212ENST00000528575 MTHFSDQ2M296 383 aaKnown RBP24.9■■□□□ 1.58
YIF1A-212ENST00000528575 SCN11AQ9UI33 1791 aa24.9■■□□□ 1.58
YIF1A-212ENST00000528575 CABP4P57796 275 aa24.89■■□□□ 1.58
YIF1A-212ENST00000528575 PELP1Q8IZL8 1130 aaKnown RBP24.89■■□□□ 1.58
YIF1A-212ENST00000528575 CD2APQ9Y5K6 639 aa24.89■■□□□ 1.58
YIF1A-212ENST00000528575 TJP1Q07157 1748 aa24.89■■□□□ 1.57
YIF1A-212ENST00000528575 NEFMP07197 916 aa24.88■■□□□ 1.57
YIF1A-212ENST00000528575 PRKAR2BP31323 418 aa24.88■■□□□ 1.57
YIF1A-212ENST00000528575 C4AP0C0L4 1744 aa24.87■■□□□ 1.57
YIF1A-212ENST00000528575 ADAMTS7Q9UKP4 1686 aa24.87■■□□□ 1.57
YIF1A-212ENST00000528575 CICQ96RK0 1608 aaPredicted RBP24.86■■□□□ 1.57
YIF1A-212ENST00000528575 MRC1P22897 1456 aa24.86■■□□□ 1.57
YIF1A-212ENST00000528575 KIF13BQ9NQT8 1826 aa24.85■■□□□ 1.57
YIF1A-212ENST00000528575 GNAT3A8MTJ3 354 aa24.85■■□□□ 1.57
YIF1A-212ENST00000528575 RNMTO43148 476 aaKnown RBP24.84■■□□□ 1.57
YIF1A-212ENST00000528575 NFATC2IPQ8NCF5 419 aa24.84■■□□□ 1.57
YIF1A-212ENST00000528575 SLC52A2Q9HAB3 445 aa24.84■■□□□ 1.57
YIF1A-212ENST00000528575 RBM42Q9BTD8 480 aaKnown RBP24.83■■□□□ 1.57
YIF1A-212ENST00000528575 VIRMAQ69YN4 1812 aaKnown RBP24.83■■□□□ 1.57
YIF1A-212ENST00000528575 CNTNAP4Q9C0A0 1308 aa24.83■■□□□ 1.56
YIF1A-212ENST00000528575 HTATSF1O43719 755 aaKnown RBP24.82■■□□□ 1.56
YIF1A-212ENST00000528575 LGR6Q9HBX8 967 aa24.82■■□□□ 1.56
YIF1A-212ENST00000528575 RC3H1Q5TC82 1133 aaKnown RBP24.81■■□□□ 1.56
YIF1A-212ENST00000528575 ARHGEF1Q92888 912 aaKnown RBP24.81■■□□□ 1.56
YIF1A-212ENST00000528575 WWC3Q9ULE0 1092 aa24.81■■□□□ 1.56
YIF1A-212ENST00000528575 PHACTR3Q96KR7 559 aa24.8■■□□□ 1.56
YIF1A-212ENST00000528575 CEP350Q5VT06 3117 aa24.8■■□□□ 1.56
YIF1A-212ENST00000528575 PXDNLA1KZ92 1463 aa24.79■■□□□ 1.56
YIF1A-212ENST00000528575 MMP10P09238 476 aa24.79■■□□□ 1.56
YIF1A-212ENST00000528575 PTCD1O75127 700 aaKnown RBP24.78■■□□□ 1.56
YIF1A-212ENST00000528575 GYS1P13807 737 aa24.78■■□□□ 1.56
YIF1A-212ENST00000528575 ADCY9O60503 1353 aa24.78■■□□□ 1.56
YIF1A-212ENST00000528575 CEMIPQ8WUJ3 1361 aa24.78■■□□□ 1.56
YIF1A-212ENST00000528575 KCPQ6ZWJ8 1503 aa24.77■■□□□ 1.56
YIF1A-212ENST00000528575 RPS6KA4O75676 772 aa24.77■■□□□ 1.56
YIF1A-212ENST00000528575 RTF1Q92541 710 aaKnown RBP24.77■■□□□ 1.56
YIF1A-212ENST00000528575 PLEKHF1Q96S99 279 aa24.77■■□□□ 1.56
YIF1A-212ENST00000528575 RTCBQ9Y3I0 505 aaKnown RBP24.77■■□□□ 1.56
YIF1A-212ENST00000528575 N4BP2Q86UW6 1770 aaPredicted RBP24.77■■□□□ 1.56
YIF1A-212ENST00000528575 GRIN3BO60391 1043 aa24.76■■□□□ 1.55
YIF1A-212ENST00000528575 TRAPPC3LQ5T215 181 aa24.76■■□□□ 1.55
YIF1A-212ENST00000528575 C10orf71Q711Q0 1435 aa24.76■■□□□ 1.55
YIF1A-212ENST00000528575 TEFQ10587 303 aa24.75■■□□□ 1.55
YIF1A-212ENST00000528575 INTS5Q6P9B9 1019 aaKnown RBP24.75■■□□□ 1.55
YIF1A-212ENST00000528575 MAPK8IP3Q9UPT6 1336 aa24.75■■□□□ 1.55
YIF1A-212ENST00000528575 ANP32CO43423 234 aa24.74■■□□□ 1.55
YIF1A-212ENST00000528575 CRKLP46109 303 aaKnown RBP24.74■■□□□ 1.55
YIF1A-212ENST00000528575 WDR43Q15061 677 aaKnown RBP eCLIP24.74■■□□□ 1.55
YIF1A-212ENST00000528575 IL17REQ8NFR9 667 aa24.74■■□□□ 1.55
YIF1A-212ENST00000528575 BRCA1P38398 1863 aaKnown RBP24.73■■□□□ 1.55
YIF1A-212ENST00000528575 C1QTNF8P60827 252 aa24.73■■□□□ 1.55
YIF1A-212ENST00000528575 SRP68Q9UHB9 627 aaKnown RBP24.73■■□□□ 1.55
YIF1A-212ENST00000528575 ATP10DQ9P241 1426 aa24.72■■□□□ 1.55
YIF1A-212ENST00000528575 ADRA2BP18089 450 aa24.72■■□□□ 1.55
YIF1A-212ENST00000528575 SLC39A6Q13433 755 aa24.72■■□□□ 1.55
YIF1A-212ENST00000528575 UBR2Q8IWV8 1755 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms