RNA–Protein interactions for RNA: ENST00000528439.5

RPS3-210, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-210ENST00000528439 C20orf194Q5TEA3 1177 aa12.98□□□□□ -0.33
RPS3-210ENST00000528439 USP21Q9UK80 565 aa12.98□□□□□ -0.33
RPS3-210ENST00000528439 THSD7AQ9UPZ6 1657 aa12.98□□□□□ -0.33
RPS3-210ENST00000528439 ELL2O00472 640 aaPredicted RBP12.97□□□□□ -0.33
RPS3-210ENST00000528439 KCNQ3O43525 872 aa12.97□□□□□ -0.33
RPS3-210ENST00000528439 VAMP4O75379 141 aa12.97□□□□□ -0.33
RPS3-210ENST00000528439 TWISTNBQ3B726 338 aaPredicted RBP12.97□□□□□ -0.33
RPS3-210ENST00000528439 ZNF772Q68DY9 489 aaPredicted RBP12.97□□□□□ -0.33
RPS3-210ENST00000528439 SSH1Q8WYL5 1049 aa12.97□□□□□ -0.33
RPS3-210ENST00000528439 DCAF5Q96JK2 942 aa12.97□□□□□ -0.33
RPS3-210ENST00000528439 C5P01031 1676 aa12.96□□□□□ -0.33
RPS3-210ENST00000528439 TEFQ10587 303 aa12.96□□□□□ -0.33
RPS3-210ENST00000528439 NKX1-1Q15270 411 aaPredicted RBP12.96□□□□□ -0.33
RPS3-210ENST00000528439 VPS72Q15906 364 aa12.96□□□□□ -0.33
RPS3-210ENST00000528439 SLC52A2Q9HAB3 445 aa12.96□□□□□ -0.33
RPS3-210ENST00000528439 BABAM1Q9NWV8 329 aa12.96□□□□□ -0.33
RPS3-210ENST00000528439 DOT1LQ8TEK3 1739 aa12.96□□□□□ -0.34
RPS3-210ENST00000528439 ATRNO75882 1429 aa12.96□□□□□ -0.34
RPS3-210ENST00000528439 BARGINQ6ZT62 677 aa12.95□□□□□ -0.34
RPS3-210ENST00000528439 DDX54Q8TDD1 881 aaKnown RBP12.95□□□□□ -0.34
RPS3-210ENST00000528439 SMC4Q9NTJ3 1288 aa12.95□□□□□ -0.34
RPS3-210ENST00000528439 TNNQ9UQP3 1299 aa12.95□□□□□ -0.34
RPS3-210ENST00000528439 THRAP3Q9Y2W1 955 aaKnown RBP12.95□□□□□ -0.34
RPS3-210ENST00000528439 UBR2Q8IWV8 1755 aa12.94□□□□□ -0.34
RPS3-210ENST00000528439 TCERG1O14776 1098 aaKnown RBP12.94□□□□□ -0.34
RPS3-210ENST00000528439 HSP90AB1P08238 724 aaKnown RBP12.94□□□□□ -0.34
RPS3-210ENST00000528439 RGS17Q9UGC6 210 aaPredicted RBP12.94□□□□□ -0.34
RPS3-210ENST00000528439 TRPC5Q9UL62 973 aaPredicted RBP12.94□□□□□ -0.34
RPS3-210ENST00000528439 ITGB4P16144 1822 aa12.93□□□□□ -0.34
RPS3-210ENST00000528439 BTBD11A6QL63 1104 aa12.93□□□□□ -0.34
RPS3-210ENST00000528439 EIF4A1P60842 406 aaKnown RBP12.93□□□□□ -0.34
RPS3-210ENST00000528439 ALDH1L2Q3SY69 923 aa12.93□□□□□ -0.34
RPS3-210ENST00000528439 MRPL50Q8N5N7 158 aaKnown RBP12.93□□□□□ -0.34
RPS3-210ENST00000528439 CCDC9Q9Y3X0 531 aaKnown RBP12.93□□□□□ -0.34
RPS3-210ENST00000528439 HEG1Q9ULI3 1381 aa12.93□□□□□ -0.34
RPS3-210ENST00000528439 KCPQ6ZWJ8 1503 aa12.93□□□□□ -0.34
RPS3-210ENST00000528439 SLC39A6Q13433 755 aa12.92□□□□□ -0.34
RPS3-210ENST00000528439 FAM98CQ17RN3 349 aaKnown RBP12.92□□□□□ -0.34
RPS3-210ENST00000528439 NFATC2IPQ8NCF5 419 aa12.92□□□□□ -0.34
RPS3-210ENST00000528439 CRBNQ96SW2 442 aa12.92□□□□□ -0.34
RPS3-210ENST00000528439 CDCA7Q9BWT1 371 aaPredicted RBP12.92□□□□□ -0.34
RPS3-210ENST00000528439 QTRT2Q9H974 415 aaKnown RBP12.92□□□□□ -0.34
RPS3-210ENST00000528439 FRAT1Q92837 279 aaPredicted RBP12.91□□□□□ -0.34
RPS3-210ENST00000528439 ZNF428Q96B54 188 aa12.91□□□□□ -0.34
RPS3-210ENST00000528439 RGS12O14924 1447 aa12.9□□□□□ -0.34
RPS3-210ENST00000528439 LAMB4A4D0S4 1761 aa12.9□□□□□ -0.34
RPS3-210ENST00000528439 RLBP1P12271 317 aa12.9□□□□□ -0.34
RPS3-210ENST00000528439 BRPF1P55201 1214 aaPredicted RBP12.9□□□□□ -0.34
RPS3-210ENST00000528439 CABP4P57796 275 aa12.9□□□□□ -0.34
RPS3-210ENST00000528439 EXOC6Q8TAG9 804 aa12.9□□□□□ -0.34
RPS3-210ENST00000528439 KIF16BQ96L93 1317 aa12.89□□□□□ -0.35
RPS3-210ENST00000528439 PRAMEF22A3QJZ6 481 aa12.89□□□□□ -0.35
RPS3-210ENST00000528439 ERVV-2B6SEH9 535 aa12.89□□□□□ -0.35
RPS3-210ENST00000528439 EXOC5O00471 708 aa12.89□□□□□ -0.35
RPS3-210ENST00000528439 TRIM27P14373 513 aa12.89□□□□□ -0.35
RPS3-210ENST00000528439 RBM6P78332 1123 aaKnown RBP12.89□□□□□ -0.35
RPS3-210ENST00000528439 DDB1Q16531 1140 aa12.89□□□□□ -0.35
RPS3-210ENST00000528439 ZNF790Q6PG37 636 aa12.89□□□□□ -0.35
RPS3-210ENST00000528439 POTEAQ6S8J7 498 aa12.89□□□□□ -0.35
RPS3-210ENST00000528439 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.89□□□□□ -0.35
RPS3-210ENST00000528439 MARCH10Q8NA82 808 aaPredicted RBP12.89□□□□□ -0.35
RPS3-210ENST00000528439 PANK1Q8TE04 598 aa12.89□□□□□ -0.35
RPS3-210ENST00000528439 GJD4Q96KN9 370 aaPredicted RBP12.89□□□□□ -0.35
RPS3-210ENST00000528439 NOB1Q9ULX3 412 aaKnown RBP12.89□□□□□ -0.35
RPS3-210ENST00000528439 CANXP27824 592 aaKnown RBP12.88□□□□□ -0.35
RPS3-210ENST00000528439 BCL9O00512 1426 aa12.88□□□□□ -0.35
RPS3-210ENST00000528439 SOS1Q07889 1333 aaPredicted RBP12.88□□□□□ -0.35
RPS3-210ENST00000528439 GIGYF1O75420 1035 aaPredicted RBP12.87□□□□□ -0.35
RPS3-210ENST00000528439 RXRBP28702 533 aa12.87□□□□□ -0.35
RPS3-210ENST00000528439 PDE3AQ14432 1141 aa12.87□□□□□ -0.35
RPS3-210ENST00000528439 ZKSCAN2Q63HK3 967 aa12.87□□□□□ -0.35
RPS3-210ENST00000528439 POTEHQ6S545 545 aa12.87□□□□□ -0.35
RPS3-210ENST00000528439 NECTIN2Q92692 538 aa12.87□□□□□ -0.35
RPS3-210ENST00000528439 CLUAP1Q96AJ1 413 aa12.87□□□□□ -0.35
RPS3-210ENST00000528439 ZNF496Q96IT1 587 aaPredicted RBP12.87□□□□□ -0.35
RPS3-210ENST00000528439 HOXB7P09629 217 aa12.86□□□□□ -0.35
RPS3-210ENST00000528439 HDGFL1Q5TGJ6 251 aa12.86□□□□□ -0.35
RPS3-210ENST00000528439 ERICH6BQ5W0A0 696 aa12.86□□□□□ -0.35
RPS3-210ENST00000528439 ATF7IPQ6VMQ6 1270 aa12.86□□□□□ -0.35
RPS3-210ENST00000528439 G2E3Q7L622 706 aa12.86□□□□□ -0.35
RPS3-210ENST00000528439 PIGBQ92521 554 aa12.86□□□□□ -0.35
RPS3-210ENST00000528439 RNF39Q9H2S5 420 aa12.86□□□□□ -0.35
RPS3-210ENST00000528439 TMOD3Q9NYL9 352 aa12.85□□□□□ -0.35
RPS3-210ENST00000528439 COG6Q9Y2V7 657 aa12.85□□□□□ -0.35
RPS3-210ENST00000528439 ABCC4O15439 1325 aa12.85□□□□□ -0.35
RPS3-210ENST00000528439 CCDC30Q5VVM6 783 aa12.84□□□□□ -0.35
RPS3-210ENST00000528439 N4BP2Q86UW6 1770 aaPredicted RBP12.84□□□□□ -0.35
RPS3-210ENST00000528439 NHSQ6T4R5 1651 aa12.83□□□□□ -0.35
RPS3-210ENST00000528439 TJP1Q07157 1748 aa12.83□□□□□ -0.36
RPS3-210ENST00000528439 SLC4A2P04920 1241 aa12.83□□□□□ -0.36
RPS3-210ENST00000528439 EIF2S2P20042 333 aaKnown RBP12.83□□□□□ -0.36
RPS3-210ENST00000528439 PROSER3Q2NL68 480 aa12.83□□□□□ -0.36
RPS3-210ENST00000528439 DZIP1LQ8IYY4 767 aaKnown RBP12.83□□□□□ -0.36
RPS3-210ENST00000528439 TTC5Q8N0Z6 440 aa12.83□□□□□ -0.36
RPS3-210ENST00000528439 PPP4R2Q9NY27 417 aa12.83□□□□□ -0.36
RPS3-210ENST00000528439 CHPF2Q9P2E5 772 aa12.83□□□□□ -0.36
RPS3-210ENST00000528439 ASAP1Q9ULH1 1129 aa12.83□□□□□ -0.36
RPS3-210ENST00000528439 CACNA1FO60840 1977 aa12.83□□□□□ -0.36
RPS3-210ENST00000528439 BRWD3Q6RI45 1802 aa12.83□□□□□ -0.36
RPS3-210ENST00000528439 A0A0G2JS52 829 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms