RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 FYCO1Q9BQS8 1478 aa10.95□□□□□ -0.66
CTNND1-213ENST00000526357 TOP1P11387 765 aaKnown RBP10.94□□□□□ -0.66
CTNND1-213ENST00000526357 CWC27Q6UX04 472 aaKnown RBP10.94□□□□□ -0.66
CTNND1-213ENST00000526357 SSX2IPQ9Y2D8 614 aa10.94□□□□□ -0.66
CTNND1-213ENST00000526357 CALCOCO1Q9P1Z2 691 aa10.94□□□□□ -0.66
CTNND1-213ENST00000526357 FSD2A1L4K1 749 aa10.94□□□□□ -0.66
CTNND1-213ENST00000526357 MYL6BP14649 208 aa10.94□□□□□ -0.66
CTNND1-213ENST00000526357 CETN1Q12798 172 aa10.94□□□□□ -0.66
CTNND1-213ENST00000526357 CCDC196A0A1B0GTZ2 297 aa10.94□□□□□ -0.66
CTNND1-213ENST00000526357 SPDYE4A6NLX3 237 aa10.94□□□□□ -0.66
CTNND1-213ENST00000526357 MYOM3Q5VTT5 1437 aa10.93□□□□□ -0.66
CTNND1-213ENST00000526357 SREK1Q8WXA9 508 aaKnown RBP10.93□□□□□ -0.66
CTNND1-213ENST00000526357 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.93□□□□□ -0.667e-6■□□□□ 8.3
CTNND1-213ENST00000526357 WIZO95785 1651 aa10.93□□□□□ -0.66
CTNND1-213ENST00000526357 POLR3DP05423 398 aaPredicted RBP10.93□□□□□ -0.66
CTNND1-213ENST00000526357 TOM1L2Q6ZVM7 507 aa10.93□□□□□ -0.66
CTNND1-213ENST00000526357 UBA5Q9GZZ9 404 aa10.93□□□□□ -0.66
CTNND1-213ENST00000526357 POLR3GO15318 223 aaPredicted RBP10.93□□□□□ -0.66
CTNND1-213ENST00000526357 URI1O94763 535 aaPredicted RBP10.93□□□□□ -0.66
CTNND1-213ENST00000526357 CRACR2BQ8N4Y2 399 aaPredicted RBP10.93□□□□□ -0.66
CTNND1-213ENST00000526357 NUP88Q99567 741 aaPredicted RBP10.93□□□□□ -0.66
CTNND1-213ENST00000526357 AKAP2Q9Y2D5 859 aa10.93□□□□□ -0.66
CTNND1-213ENST00000526357 SPECC1Q5M775 1068 aa10.93□□□□□ -0.66
CTNND1-213ENST00000526357 DRC1Q96MC2 740 aa10.93□□□□□ -0.66
CTNND1-213ENST00000526357 U3KPZ7 1027 aaPredicted RBP10.93□□□□□ -0.66
CTNND1-213ENST00000526357 CASTP20810 708 aaKnown RBP10.93□□□□□ -0.66
CTNND1-213ENST00000526357 PPP2R1AP30153 589 aa10.93□□□□□ -0.66
CTNND1-213ENST00000526357 ESPNB1AK53 854 aa10.92□□□□□ -0.66
CTNND1-213ENST00000526357 CAMK4Q16566 473 aa10.92□□□□□ -0.66
CTNND1-213ENST00000526357 ZNF530Q6P9A1 599 aaPredicted RBP10.92□□□□□ -0.66
CTNND1-213ENST00000526357 LRRC45Q96CN5 670 aa10.92□□□□□ -0.66
CTNND1-213ENST00000526357 CTAGE5O15320 804 aa10.92□□□□□ -0.66
CTNND1-213ENST00000526357 SRGAP3O43295 1099 aa10.92□□□□□ -0.66
CTNND1-213ENST00000526357 IDH1O75874 414 aaKnown RBP10.92□□□□□ -0.66
CTNND1-213ENST00000526357 BAG4O95429 457 aaKnown RBP10.92□□□□□ -0.66
CTNND1-213ENST00000526357 WDR63Q8IWG1 891 aa10.92□□□□□ -0.66
CTNND1-213ENST00000526357 DDX54Q8TDD1 881 aaKnown RBP10.92□□□□□ -0.66
CTNND1-213ENST00000526357 BBXQ8WY36 941 aaPredicted RBP10.92□□□□□ -0.66
CTNND1-213ENST00000526357 BMS1Q14692 1282 aaKnown RBP10.92□□□□□ -0.66
CTNND1-213ENST00000526357 ZSCAN30Q86W11 494 aa10.92□□□□□ -0.66
CTNND1-213ENST00000526357 NEMFO60524 1076 aa10.91□□□□□ -0.66
CTNND1-213ENST00000526357 CCDC183Q5T5S1 534 aa10.91□□□□□ -0.66
CTNND1-213ENST00000526357 PROSER2Q86WR7 435 aaPredicted RBP10.91□□□□□ -0.66
CTNND1-213ENST00000526357 ZNF692Q9BU19 519 aaPredicted RBP10.91□□□□□ -0.66
CTNND1-213ENST00000526357 MACROD2A1Z1Q3 448 aa10.91□□□□□ -0.66
CTNND1-213ENST00000526357 TDRD12Q587J7 1177 aaKnown RBP10.91□□□□□ -0.66
CTNND1-213ENST00000526357 MKNK2Q9HBH9 465 aa10.91□□□□□ -0.66
CTNND1-213ENST00000526357 SMARCC1Q92922 1105 aaPredicted RBP10.91□□□□□ -0.66
CTNND1-213ENST00000526357 MVPQ14764 893 aaKnown RBP10.91□□□□□ -0.66
CTNND1-213ENST00000526357 CAVIN4Q5BKX8 364 aa10.91□□□□□ -0.66
CTNND1-213ENST00000526357 CTR9Q6PD62 1173 aa10.91□□□□□ -0.66
CTNND1-213ENST00000526357 STXBP4Q6ZWJ1 553 aa10.91□□□□□ -0.66
CTNND1-213ENST00000526357 FAM114A1Q8IWE2 563 aa10.91□□□□□ -0.66
CTNND1-213ENST00000526357 SCAND2PQ9GZW5 306 aaPredicted RBP10.91□□□□□ -0.66
CTNND1-213ENST00000526357 KLHL10Q6JEL2 608 aa10.9□□□□□ -0.66
CTNND1-213ENST00000526357 PLEKHH1Q9ULM0 1364 aa10.9□□□□□ -0.66
CTNND1-213ENST00000526357 BTBD11A6QL63 1104 aa10.9□□□□□ -0.66
CTNND1-213ENST00000526357 AMPD3Q01432 767 aa10.9□□□□□ -0.66
CTNND1-213ENST00000526357 CLIP2Q9UDT6 1046 aa10.9□□□□□ -0.66
CTNND1-213ENST00000526357 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.9□□□□□ -0.66
CTNND1-213ENST00000526357 IKBKGQ9Y6K9 419 aa10.9□□□□□ -0.66
CTNND1-213ENST00000526357 V9GYY5 206 aaPredicted RBP10.9□□□□□ -0.66
CTNND1-213ENST00000526357 A0A087WZG4 1122 aa10.9□□□□□ -0.66
CTNND1-213ENST00000526357 CHMP4BP1P59074 171 aa10.9□□□□□ -0.66
CTNND1-213ENST00000526357 HLTFQ14527 1009 aaKnown RBP eCLIP10.9□□□□□ -0.665e-6■□□□□ 9.8
CTNND1-213ENST00000526357 CTCFLQ8NI51 663 aaPredicted RBP10.9□□□□□ -0.66
CTNND1-213ENST00000526357 SYCE3A1L190 88 aa10.9□□□□□ -0.66
CTNND1-213ENST00000526357 HMGB1P09429 215 aaKnown RBP10.9□□□□□ -0.66
CTNND1-213ENST00000526357 ATF7IPQ6VMQ6 1270 aa10.9□□□□□ -0.66
CTNND1-213ENST00000526357 RPAP2Q8IXW5 612 aaPredicted RBP10.9□□□□□ -0.66
CTNND1-213ENST00000526357 PPP1R14CQ8TAE6 165 aa10.9□□□□□ -0.66
CTNND1-213ENST00000526357 RAB11FIP3O75154 756 aa10.9□□□□□ -0.67
CTNND1-213ENST00000526357 BCAR3O75815 825 aa10.9□□□□□ -0.67
CTNND1-213ENST00000526357 MCM4P33991 863 aa10.9□□□□□ -0.67
CTNND1-213ENST00000526357 LMAN1P49257 510 aa10.9□□□□□ -0.67
CTNND1-213ENST00000526357 IFI16Q16666 785 aaKnown RBP10.9□□□□□ -0.67
CTNND1-213ENST00000526357 SULT6B1Q6IMI4 303 aa10.9□□□□□ -0.67
CTNND1-213ENST00000526357 DAAM2Q86T65 1068 aa10.9□□□□□ -0.67
CTNND1-213ENST00000526357 CEP112Q8N8E3 955 aa10.9□□□□□ -0.67
CTNND1-213ENST00000526357 GOLGA6L9A6NEM1 432 aa10.89□□□□□ -0.67
CTNND1-213ENST00000526357 SSRP1Q08945 709 aaKnown RBP10.89□□□□□ -0.67
CTNND1-213ENST00000526357 TTC21AQ8NDW8 1320 aa10.89□□□□□ -0.67
CTNND1-213ENST00000526357 TMCO5BA8MYB1 307 aa10.89□□□□□ -0.67
CTNND1-213ENST00000526357 ACTN2P35609 894 aa10.89□□□□□ -0.67
CTNND1-213ENST00000526357 PUS7Q96PZ0 661 aaKnown RBP10.89□□□□□ -0.67
CTNND1-213ENST00000526357 PYM1Q9BRP8 204 aaKnown RBP10.89□□□□□ -0.67
CTNND1-213ENST00000526357 GSDMDP57764 484 aa10.89□□□□□ -0.67
CTNND1-213ENST00000526357 MAATS1Q7Z4T9 603 aa10.89□□□□□ -0.67
CTNND1-213ENST00000526357 RAB3IL1Q8TBN0 382 aa10.89□□□□□ -0.67
CTNND1-213ENST00000526357 TSR2Q969E8 191 aaKnown RBP10.89□□□□□ -0.67
CTNND1-213ENST00000526357 ZNF652Q9Y2D9 606 aa10.89□□□□□ -0.67
CTNND1-213ENST00000526357 CUX1P39880 1505 aa10.89□□□□□ -0.67
CTNND1-213ENST00000526357 METTL24Q5JXM2 366 aa10.89□□□□□ -0.67
CTNND1-213ENST00000526357 TMEM132EQ6IEE7 984 aa10.89□□□□□ -0.67
CTNND1-213ENST00000526357 SH2B1Q9NRF2 756 aaPredicted RBP10.89□□□□□ -0.67
CTNND1-213ENST00000526357 PODXL2Q9NZ53 605 aa10.89□□□□□ -0.67
CTNND1-213ENST00000526357 CCDC96Q2M329 555 aa10.89□□□□□ -0.67
CTNND1-213ENST00000526357 SLF2Q8IX21 1173 aa10.89□□□□□ -0.67
CTNND1-213ENST00000526357 ZNF444Q8N0Y2 327 aaPredicted RBP10.89□□□□□ -0.67
CTNND1-213ENST00000526357 ZWINTO95229 277 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms