RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 TSPYL4Q9UJ04 414 aa18.69■□□□□ 0.58
COLCA2-202ENST00000526216 HSP90AB1P08238 724 aaKnown RBP18.68■□□□□ 0.58
COLCA2-202ENST00000526216 C8orf58Q8NAV2 365 aa18.68■□□□□ 0.58
COLCA2-202ENST00000526216 GJD4Q96KN9 370 aaPredicted RBP18.68■□□□□ 0.58
COLCA2-202ENST00000526216 EXOC5O00471 708 aa18.67■□□□□ 0.58
COLCA2-202ENST00000526216 KCNQ3O43525 872 aa18.67■□□□□ 0.58
COLCA2-202ENST00000526216 TEFQ10587 303 aa18.67■□□□□ 0.58
COLCA2-202ENST00000526216 SLC52A2Q9HAB3 445 aa18.67■□□□□ 0.58
COLCA2-202ENST00000526216 BABAM1Q9NWV8 329 aa18.67■□□□□ 0.58
COLCA2-202ENST00000526216 TRPC5Q9UL62 973 aaPredicted RBP18.67■□□□□ 0.58
COLCA2-202ENST00000526216 PAPPAQ13219 1627 aa18.66■□□□□ 0.58
COLCA2-202ENST00000526216 DDB1Q16531 1140 aa18.66■□□□□ 0.58
COLCA2-202ENST00000526216 MARCH10Q8NA82 808 aaPredicted RBP18.65■□□□□ 0.58
COLCA2-202ENST00000526216 DOT1LQ8TEK3 1739 aa18.65■□□□□ 0.58
COLCA2-202ENST00000526216 VAMP4O75379 141 aa18.64■□□□□ 0.57
COLCA2-202ENST00000526216 RARSP54136 660 aaKnown RBP18.64■□□□□ 0.57
COLCA2-202ENST00000526216 NFATC2IPQ8NCF5 419 aa18.64■□□□□ 0.57
COLCA2-202ENST00000526216 QTRT2Q9H974 415 aaKnown RBP18.64■□□□□ 0.57
COLCA2-202ENST00000526216 BTBD11A6QL63 1104 aa18.63■□□□□ 0.57
COLCA2-202ENST00000526216 BCAR3O75815 825 aa18.63■□□□□ 0.57
COLCA2-202ENST00000526216 CT47B1P0C2W7 299 aaPredicted RBP18.63■□□□□ 0.57
COLCA2-202ENST00000526216 ITGB4P16144 1822 aa18.63■□□□□ 0.57
COLCA2-202ENST00000526216 ERVV-2B6SEH9 535 aa18.62■□□□□ 0.57
COLCA2-202ENST00000526216 ELL2O00472 640 aaPredicted RBP18.62■□□□□ 0.57
COLCA2-202ENST00000526216 ONECUT3O60422 494 aaPredicted RBP18.62■□□□□ 0.57
COLCA2-202ENST00000526216 RRP1P56182 461 aaKnown RBP18.62■□□□□ 0.57
COLCA2-202ENST00000526216 EIF4A1P60842 406 aaKnown RBP18.62■□□□□ 0.57
COLCA2-202ENST00000526216 TWISTNBQ3B726 338 aaPredicted RBP18.62■□□□□ 0.57
COLCA2-202ENST00000526216 DCAF8L1A6NGE4 600 aa18.61■□□□□ 0.57
COLCA2-202ENST00000526216 HEG1Q9ULI3 1381 aa18.6■□□□□ 0.57
COLCA2-202ENST00000526216 CABP4P57796 275 aa18.6■□□□□ 0.57
COLCA2-202ENST00000526216 SLC39A6Q13433 755 aa18.6■□□□□ 0.57
COLCA2-202ENST00000526216 SSH1Q8WYL5 1049 aa18.6■□□□□ 0.57
COLCA2-202ENST00000526216 UBR2Q8IWV8 1755 aa18.6■□□□□ 0.57
COLCA2-202ENST00000526216 KCPQ6ZWJ8 1503 aa18.59■□□□□ 0.57
COLCA2-202ENST00000526216 POTEHQ6S545 545 aa18.59■□□□□ 0.57
COLCA2-202ENST00000526216 BCL2L13Q9BXK5 485 aa18.59■□□□□ 0.57
COLCA2-202ENST00000526216 RGS17Q9UGC6 210 aaPredicted RBP18.59■□□□□ 0.57
COLCA2-202ENST00000526216 C5P01031 1676 aa18.59■□□□□ 0.57
COLCA2-202ENST00000526216 PLIN1O60240 522 aa18.58■□□□□ 0.57
COLCA2-202ENST00000526216 IRX6P78412 446 aaPredicted RBP18.57■□□□□ 0.56
COLCA2-202ENST00000526216 ZNF790Q6PG37 636 aa18.57■□□□□ 0.56
COLCA2-202ENST00000526216 BCL9O00512 1426 aa18.56■□□□□ 0.56
COLCA2-202ENST00000526216 TCERG1O14776 1098 aaKnown RBP18.56■□□□□ 0.56
COLCA2-202ENST00000526216 ZNF772Q68DY9 489 aaPredicted RBP18.56■□□□□ 0.56
COLCA2-202ENST00000526216 SEPT12Q8IYM1 358 aa18.56■□□□□ 0.56
COLCA2-202ENST00000526216 PIGBQ92521 554 aa18.56■□□□□ 0.56
COLCA2-202ENST00000526216 BRWD3Q6RI45 1802 aa18.55■□□□□ 0.56
COLCA2-202ENST00000526216 A0A0G2JS52 829 aa18.55■□□□□ 0.56
COLCA2-202ENST00000526216 MYT1Q01538 1121 aa18.55■□□□□ 0.56
COLCA2-202ENST00000526216 ALDH1L2Q3SY69 923 aa18.55■□□□□ 0.56
COLCA2-202ENST00000526216 MRPL50Q8N5N7 158 aaKnown RBP18.55■□□□□ 0.56
COLCA2-202ENST00000526216 PRAMEF22A3QJZ6 481 aa18.54■□□□□ 0.56
COLCA2-202ENST00000526216 ZNF428Q96B54 188 aa18.54■□□□□ 0.56
COLCA2-202ENST00000526216 TMOD3Q9NYL9 352 aa18.54■□□□□ 0.56
COLCA2-202ENST00000526216 TNNQ9UQP3 1299 aa18.54■□□□□ 0.56
COLCA2-202ENST00000526216 GTF3C3Q9Y5Q9 886 aa18.54■□□□□ 0.56
COLCA2-202ENST00000526216 PRIM1P49642 420 aaKnown RBP18.53■□□□□ 0.56
COLCA2-202ENST00000526216 C20orf194Q5TEA3 1177 aa18.53■□□□□ 0.56
COLCA2-202ENST00000526216 ACSBG1Q96GR2 724 aa18.53■□□□□ 0.56
COLCA2-202ENST00000526216 ZNF496Q96IT1 587 aaPredicted RBP18.53■□□□□ 0.56
COLCA2-202ENST00000526216 SMC4Q9NTJ3 1288 aa18.53■□□□□ 0.56
COLCA2-202ENST00000526216 GIGYF1O75420 1035 aaPredicted RBP18.52■□□□□ 0.56
COLCA2-202ENST00000526216 RBM6P78332 1123 aaKnown RBP18.52■□□□□ 0.56
COLCA2-202ENST00000526216 FAM182BQ5T319 152 aa18.52■□□□□ 0.56
COLCA2-202ENST00000526216 SOS1Q07889 1333 aaPredicted RBP18.52■□□□□ 0.56
COLCA2-202ENST00000526216 LAMB4A4D0S4 1761 aa18.52■□□□□ 0.55
COLCA2-202ENST00000526216 NHSQ6T4R5 1651 aa18.52■□□□□ 0.55
COLCA2-202ENST00000526216 BRPF1P55201 1214 aaPredicted RBP18.51■□□□□ 0.55
COLCA2-202ENST00000526216 POTEAQ6S8J7 498 aa18.51■□□□□ 0.55
COLCA2-202ENST00000526216 ATG3Q9NT62 314 aa18.51■□□□□ 0.55
COLCA2-202ENST00000526216 ASAP1Q9ULH1 1129 aa18.51■□□□□ 0.55
COLCA2-202ENST00000526216 KCNQ2O43526 872 aa18.5■□□□□ 0.55
COLCA2-202ENST00000526216 HOXB7P09629 217 aa18.5■□□□□ 0.55
COLCA2-202ENST00000526216 FKBP8Q14318 412 aa18.5■□□□□ 0.55
COLCA2-202ENST00000526216 TTC5Q8N0Z6 440 aa18.49■□□□□ 0.55
COLCA2-202ENST00000526216 NECTIN2Q92692 538 aa18.49■□□□□ 0.55
COLCA2-202ENST00000526216 SBF2Q86WG5 1849 aa18.49■□□□□ 0.55
COLCA2-202ENST00000526216 RGS12O14924 1447 aa18.49■□□□□ 0.55
COLCA2-202ENST00000526216 PTF1AQ7RTS3 328 aa18.49■□□□□ 0.55
COLCA2-202ENST00000526216 FRAT1Q92837 279 aaPredicted RBP18.49■□□□□ 0.55
COLCA2-202ENST00000526216 SYTL4Q96C24 671 aaPredicted RBP18.49■□□□□ 0.55
COLCA2-202ENST00000526216 FMNL2Q96PY5 1086 aa18.49■□□□□ 0.55
COLCA2-202ENST00000526216 NOB1Q9ULX3 412 aaKnown RBP18.49■□□□□ 0.55
COLCA2-202ENST00000526216 HDGFL1Q5TGJ6 251 aa18.48■□□□□ 0.55
COLCA2-202ENST00000526216 G2E3Q7L622 706 aa18.48■□□□□ 0.55
COLCA2-202ENST00000526216 TJP1Q07157 1748 aa18.47■□□□□ 0.55
COLCA2-202ENST00000526216 NEFLP07196 543 aa18.47■□□□□ 0.55
COLCA2-202ENST00000526216 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.47■□□□□ 0.55
COLCA2-202ENST00000526216 SLC4A9Q96Q91 983 aa18.47■□□□□ 0.55
COLCA2-202ENST00000526216 PTCD1O75127 700 aaKnown RBP18.46■□□□□ 0.55
COLCA2-202ENST00000526216 RLBP1P12271 317 aa18.46■□□□□ 0.55
COLCA2-202ENST00000526216 EIF2S2P20042 333 aaKnown RBP18.46■□□□□ 0.55
COLCA2-202ENST00000526216 C1QBPQ07021 282 aaKnown RBP18.46■□□□□ 0.55
COLCA2-202ENST00000526216 CCDC30Q5VVM6 783 aa18.46■□□□□ 0.55
COLCA2-202ENST00000526216 USP16Q9Y5T5 823 aa18.46■□□□□ 0.55
COLCA2-202ENST00000526216 KIF16BQ96L93 1317 aa18.45■□□□□ 0.54
COLCA2-202ENST00000526216 BTAF1O14981 1849 aa18.45■□□□□ 0.54
COLCA2-202ENST00000526216 SNRPA1P09661 255 aaKnown RBP18.45■□□□□ 0.54
COLCA2-202ENST00000526216 RXRBP28702 533 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms