RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 C1orf115Q9H7X2 142 aa8.56□□□□□ -1.04
CSDE1-211ENST00000525970 PRM3Q9NNZ6 103 aa8.56□□□□□ -1.04
CSDE1-211ENST00000525970 IL2RAP01589 272 aa8.55□□□□□ -1.04
CSDE1-211ENST00000525970 CENPCQ03188 943 aa8.55□□□□□ -1.04
CSDE1-211ENST00000525970 LBRQ14739 615 aaKnown RBP8.55□□□□□ -1.04
CSDE1-211ENST00000525970 BEND7Q8N7W2 519 aaPredicted RBP8.55□□□□□ -1.04
CSDE1-211ENST00000525970 ACDQ96AP0 544 aa8.55□□□□□ -1.04
CSDE1-211ENST00000525970 XAGE2Q96GT9 111 aa8.55□□□□□ -1.04
CSDE1-211ENST00000525970 CCDC85AQ96PX6 553 aaPredicted RBP8.55□□□□□ -1.04
CSDE1-211ENST00000525970 CFHR5Q9BXR6 569 aa8.55□□□□□ -1.04
CSDE1-211ENST00000525970 HRH3Q9Y5N1 445 aa8.55□□□□□ -1.04
CSDE1-211ENST00000525970 A0A1B0GTH6 734 aa8.54□□□□□ -1.04
CSDE1-211ENST00000525970 GTF2E1P29083 439 aaPredicted RBP8.54□□□□□ -1.04
CSDE1-211ENST00000525970 MAP2K3P46734 347 aa8.54□□□□□ -1.04
CSDE1-211ENST00000525970 FLIIQ13045 1269 aa8.54□□□□□ -1.04
CSDE1-211ENST00000525970 MCM6Q14566 821 aa8.54□□□□□ -1.04
CSDE1-211ENST00000525970 ESCO1Q5FWF5 840 aa8.54□□□□□ -1.04
CSDE1-211ENST00000525970 GPAT2Q6NUI2 795 aa8.54□□□□□ -1.04
CSDE1-211ENST00000525970 PODNQ7Z5L7 613 aa8.54□□□□□ -1.04
CSDE1-211ENST00000525970 NEDD1Q8NHV4 660 aa8.54□□□□□ -1.04
CSDE1-211ENST00000525970 ZSCAN10Q96SZ4 725 aaPredicted RBP8.54□□□□□ -1.04
CSDE1-211ENST00000525970 RAB6BQ9NRW1 208 aa8.54□□□□□ -1.04
CSDE1-211ENST00000525970 PHF24Q9UPV7 400 aa8.54□□□□□ -1.04
CSDE1-211ENST00000525970 EIF4G2P78344 907 aaKnown RBP eCLIP8.53□□□□□ -1.04
CSDE1-211ENST00000525970 GNASQ5JWF2 1037 aa8.53□□□□□ -1.04
CSDE1-211ENST00000525970 CDCA7Q9BWT1 371 aaPredicted RBP8.52□□□□□ -1.05
CSDE1-211ENST00000525970 FHDC1Q9C0D6 1143 aaPredicted RBP8.52□□□□□ -1.05
CSDE1-211ENST00000525970 OIP5O43482 229 aa8.51□□□□□ -1.05
CSDE1-211ENST00000525970 USP4Q13107 963 aa8.51□□□□□ -1.05
CSDE1-211ENST00000525970 TMEM214Q6NUQ4 689 aaKnown RBP8.5□□□□□ -1.05
CSDE1-211ENST00000525970 PHTF2Q8N3S3 785 aa8.5□□□□□ -1.05
CSDE1-211ENST00000525970 SIRT1Q96EB6 747 aa8.5□□□□□ -1.05
CSDE1-211ENST00000525970 OXCT2Q9BYC2 517 aaPredicted RBP8.5□□□□□ -1.05
CSDE1-211ENST00000525970 DOLKQ9UPQ8 538 aa8.5□□□□□ -1.05
CSDE1-211ENST00000525970 TBC1D2BQ9UPU7 963 aa8.5□□□□□ -1.05
CSDE1-211ENST00000525970 CNTNAP5Q8WYK1 1306 aa8.5□□□□□ -1.05
CSDE1-211ENST00000525970 THBS1P07996 1170 aa8.49□□□□□ -1.05
CSDE1-211ENST00000525970 CSB-PGBD3P0DP91 1061 aa8.49□□□□□ -1.05
CSDE1-211ENST00000525970 SLFNL1Q499Z3 407 aa8.49□□□□□ -1.05
CSDE1-211ENST00000525970 PGBD3Q8N328 593 aa8.49□□□□□ -1.05
CSDE1-211ENST00000525970 DCAF5Q96JK2 942 aa8.49□□□□□ -1.05
CSDE1-211ENST00000525970 GDPD2Q9HCC8 539 aa8.49□□□□□ -1.05
CSDE1-211ENST00000525970 GPAMQ9HCL2 828 aa8.49□□□□□ -1.05
CSDE1-211ENST00000525970 ABL2P42684 1182 aa8.48□□□□□ -1.05
CSDE1-211ENST00000525970 PHKA2P46019 1235 aa8.48□□□□□ -1.05
CSDE1-211ENST00000525970 C4orf17Q53FE4 359 aa8.48□□□□□ -1.05
CSDE1-211ENST00000525970 RHBDD1Q8TEB9 315 aa8.48□□□□□ -1.05
CSDE1-211ENST00000525970 GDF2Q9UK05 429 aaPredicted RBP8.48□□□□□ -1.05
CSDE1-211ENST00000525970 CHIC2Q9UKJ5 165 aa8.48□□□□□ -1.05
CSDE1-211ENST00000525970 RAD21O60216 631 aa8.47□□□□□ -1.05
CSDE1-211ENST00000525970 IRF5Q13568 498 aa8.47□□□□□ -1.05
CSDE1-211ENST00000525970 UBAP2LQ14157 1087 aaKnown RBP8.47□□□□□ -1.05
CSDE1-211ENST00000525970 EFHC2Q5JST6 749 aa8.47□□□□□ -1.05
CSDE1-211ENST00000525970 PPARGC1BQ86YN6 1023 aaKnown RBP8.47□□□□□ -1.05
CSDE1-211ENST00000525970 RNF135Q8IUD6 432 aa8.47□□□□□ -1.05
CSDE1-211ENST00000525970 ATXN7L1Q9ULK2 861 aaPredicted RBP8.47□□□□□ -1.05
CSDE1-211ENST00000525970 A6NJR5 290 aa8.46□□□□□ -1.06
CSDE1-211ENST00000525970 MSX1P28360 303 aa8.46□□□□□ -1.06
CSDE1-211ENST00000525970 PLA2G4EQ3MJ16 856 aa8.46□□□□□ -1.06
CSDE1-211ENST00000525970 KLRG1Q96E93 195 aa8.46□□□□□ -1.06
CSDE1-211ENST00000525970 MSTNO14793 375 aa8.45□□□□□ -1.06
CSDE1-211ENST00000525970 TLR1Q15399 786 aa8.45□□□□□ -1.06
CSDE1-211ENST00000525970 GOLGA6L1Q8N7Z2 621 aa8.45□□□□□ -1.06
CSDE1-211ENST00000525970 CRISPLD1Q9H336 500 aa8.45□□□□□ -1.06
CSDE1-211ENST00000525970 ETNK1Q9HBU6 452 aa8.45□□□□□ -1.06
CSDE1-211ENST00000525970 COG6Q9Y2V7 657 aa8.45□□□□□ -1.06
CSDE1-211ENST00000525970 MAP7D1Q3KQU3 841 aa8.44□□□□□ -1.06
CSDE1-211ENST00000525970 TSGA10IPQ3SY00 556 aa8.44□□□□□ -1.06
CSDE1-211ENST00000525970 ALYREFQ86V81 257 aaKnown RBP8.44□□□□□ -1.06
CSDE1-211ENST00000525970 POM121Q96HA1 1249 aa8.44□□□□□ -1.06
CSDE1-211ENST00000525970 RUBCNLQ9H714 662 aa8.44□□□□□ -1.06
CSDE1-211ENST00000525970 WASHC4Q2M389 1173 aa8.43□□□□□ -1.06
CSDE1-211ENST00000525970 OXLD1Q5BKU9 147 aa8.43□□□□□ -1.06
CSDE1-211ENST00000525970 C1orf216Q8TAB5 229 aa8.43□□□□□ -1.06
CSDE1-211ENST00000525970 MKL2Q9ULH7 1088 aa8.43□□□□□ -1.06
CSDE1-211ENST00000525970 ARID3CA6NKF2 412 aa8.42□□□□□ -1.06
CSDE1-211ENST00000525970 FIGNL1Q6PIW4 674 aa8.42□□□□□ -1.06
CSDE1-211ENST00000525970 TBC1D9Q6ZT07 1266 aa8.42□□□□□ -1.06
CSDE1-211ENST00000525970 WWC1Q8IX03 1113 aa8.42□□□□□ -1.06
CSDE1-211ENST00000525970 GALNT6Q8NCL4 622 aa8.42□□□□□ -1.06
CSDE1-211ENST00000525970 NDFIP2Q9NV92 336 aa8.42□□□□□ -1.06
CSDE1-211ENST00000525970 PODXL2Q9NZ53 605 aa8.42□□□□□ -1.06
CSDE1-211ENST00000525970 INHAP05111 366 aa8.41□□□□□ -1.06
CSDE1-211ENST00000525970 BMP4P12644 408 aa8.41□□□□□ -1.06
CSDE1-211ENST00000525970 SOX11P35716 441 aa8.41□□□□□ -1.06
CSDE1-211ENST00000525970 SLCO4C1Q6ZQN7 724 aa8.41□□□□□ -1.06
CSDE1-211ENST00000525970 EDARADDQ8WWZ3 215 aa8.41□□□□□ -1.06
CSDE1-211ENST00000525970 CLUAP1Q96AJ1 413 aa8.41□□□□□ -1.06
CSDE1-211ENST00000525970 SPOCK3Q9BQ16 436 aa8.41□□□□□ -1.06
CSDE1-211ENST00000525970 SHISA8B8ZZ34 492 aa8.4□□□□□ -1.06
CSDE1-211ENST00000525970 ITGB2P05107 769 aa8.4□□□□□ -1.06
CSDE1-211ENST00000525970 FGFR3P22607 806 aa8.4□□□□□ -1.06
CSDE1-211ENST00000525970 PLA2G4AP47712 749 aa8.4□□□□□ -1.06
CSDE1-211ENST00000525970 SCNN1DP51172 638 aa8.4□□□□□ -1.06
CSDE1-211ENST00000525970 GDF10P55107 478 aa8.4□□□□□ -1.06
CSDE1-211ENST00000525970 SNRPNP63162 240 aaKnown RBP8.4□□□□□ -1.06
CSDE1-211ENST00000525970 VAC14Q08AM6 782 aa8.4□□□□□ -1.06
CSDE1-211ENST00000525970 TRIM26Q12899 539 aaPredicted RBP8.4□□□□□ -1.06
CSDE1-211ENST00000525970 BNIP3LO60238 219 aa8.39□□□□□ -1.07
CSDE1-211ENST00000525970 C1orf229Q6ZS94 237 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms