RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 DNAJC5GQ8N7S2 189 aa17.49■□□□□ 0.39
CCDC90B-205ENST00000525916 ASAP1Q9ULH1 1129 aa17.49■□□□□ 0.39
CCDC90B-205ENST00000525916 EMILIN1Q9Y6C2 1016 aa17.49■□□□□ 0.39
CCDC90B-205ENST00000525916 C10orf71Q711Q0 1435 aa17.48■□□□□ 0.39
CCDC90B-205ENST00000525916 SBF1O95248 1867 aa17.48■□□□□ 0.39
CCDC90B-205ENST00000525916 NMRK2Q9NPI5 230 aa17.48■□□□□ 0.39
CCDC90B-205ENST00000525916 TMOD3Q9NYL9 352 aa17.48■□□□□ 0.39
CCDC90B-205ENST00000525916 BCS1LQ9Y276 419 aa17.48■□□□□ 0.39
CCDC90B-205ENST00000525916 ATP6V1AP38606 617 aa17.47■□□□□ 0.39
CCDC90B-205ENST00000525916 A0A0G2JLW4 131 aa17.46■□□□□ 0.39
CCDC90B-205ENST00000525916 SPG7Q9UQ90 795 aa17.46■□□□□ 0.39
CCDC90B-205ENST00000525916 KDRP35968 1356 aa17.45■□□□□ 0.38
CCDC90B-205ENST00000525916 SLC24A1O60721 1099 aa17.45■□□□□ 0.38
CCDC90B-205ENST00000525916 TGFB2P61812 414 aa17.45■□□□□ 0.38
CCDC90B-205ENST00000525916 ARHGAP27Q6ZUM4 889 aa17.45■□□□□ 0.38
CCDC90B-205ENST00000525916 TNRC6CQ9HCJ0 1690 aaKnown RBP17.45■□□□□ 0.38
CCDC90B-205ENST00000525916 PPM1GO15355 546 aaPredicted RBP17.44■□□□□ 0.38
CCDC90B-205ENST00000525916 TMF1P82094 1093 aa17.44■□□□□ 0.38
CCDC90B-205ENST00000525916 PCGF6Q9BYE7 350 aa17.44■□□□□ 0.38
CCDC90B-205ENST00000525916 HTRA3P83110 453 aa17.43■□□□□ 0.38
CCDC90B-205ENST00000525916 ATG3Q9NT62 314 aa17.43■□□□□ 0.38
CCDC90B-205ENST00000525916 FCHSD2O94868 740 aa17.42■□□□□ 0.38
CCDC90B-205ENST00000525916 PHKG2P15735 406 aa17.42■□□□□ 0.38
CCDC90B-205ENST00000525916 DPEP1P16444 411 aa17.42■□□□□ 0.38
CCDC90B-205ENST00000525916 EYA1Q99502 592 aa17.42■□□□□ 0.38
CCDC90B-205ENST00000525916 RTCBQ9Y3I0 505 aaKnown RBP17.42■□□□□ 0.38
CCDC90B-205ENST00000525916 KCPQ6ZWJ8 1503 aa17.42■□□□□ 0.38
CCDC90B-205ENST00000525916 CCDC88AQ3V6T2 1871 aa17.41■□□□□ 0.38
CCDC90B-205ENST00000525916 IFNL2Q8IZJ0 200 aa17.41■□□□□ 0.38
CCDC90B-205ENST00000525916 CCDC87Q9NVE4 849 aa17.41■□□□□ 0.38
CCDC90B-205ENST00000525916 TRAPPC3LQ5T215 181 aa17.4■□□□□ 0.38
CCDC90B-205ENST00000525916 C9orf131Q5VYM1 1079 aa17.4■□□□□ 0.38
CCDC90B-205ENST00000525916 NLGN1Q8N2Q7 840 aa17.4■□□□□ 0.38
CCDC90B-205ENST00000525916 RBM46Q8TBY0 533 aaKnown RBP17.4■□□□□ 0.38
CCDC90B-205ENST00000525916 SLC4A9Q96Q91 983 aa17.4■□□□□ 0.38
CCDC90B-205ENST00000525916 CARD14Q9BXL6 1004 aa17.4■□□□□ 0.38
CCDC90B-205ENST00000525916 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.4■□□□□ 0.38
CCDC90B-205ENST00000525916 PLEKHG2Q9H7P9 1386 aa17.4■□□□□ 0.38
CCDC90B-205ENST00000525916 GYS1P13807 737 aa17.39■□□□□ 0.37
CCDC90B-205ENST00000525916 COL13A1Q5TAT6 717 aaPredicted RBP17.39■□□□□ 0.37
CCDC90B-205ENST00000525916 ARHGEF1Q92888 912 aaKnown RBP17.39■□□□□ 0.37
CCDC90B-205ENST00000525916 KLRG1Q96E93 195 aa17.39■□□□□ 0.37
CCDC90B-205ENST00000525916 WASHC2AQ641Q2 1341 aa17.39■□□□□ 0.37
CCDC90B-205ENST00000525916 TJP1Q07157 1748 aa17.38■□□□□ 0.37
CCDC90B-205ENST00000525916 PCNTO95613 3336 aa17.38■□□□□ 0.37
CCDC90B-205ENST00000525916 C16orf71Q8IYS4 520 aaPredicted RBP17.38■□□□□ 0.37
CCDC90B-205ENST00000525916 RBM42Q9BTD8 480 aaKnown RBP17.38■□□□□ 0.37
CCDC90B-205ENST00000525916 VIRMAQ69YN4 1812 aaKnown RBP17.37■□□□□ 0.37
CCDC90B-205ENST00000525916 KCNA3P22001 575 aa17.37■□□□□ 0.37
CCDC90B-205ENST00000525916 PARP3Q9Y6F1 533 aa17.37■□□□□ 0.37
CCDC90B-205ENST00000525916 AFDNP55196 1824 aaKnown RBP17.37■□□□□ 0.37
CCDC90B-205ENST00000525916 ADRA2BP18089 450 aa17.36■□□□□ 0.37
CCDC90B-205ENST00000525916 RFC4P35249 363 aa17.36■□□□□ 0.37
CCDC90B-205ENST00000525916 CNTNAP4Q9C0A0 1308 aa17.36■□□□□ 0.37
CCDC90B-205ENST00000525916 ADAMTS7Q9UKP4 1686 aa17.36■□□□□ 0.37
CCDC90B-205ENST00000525916 CAPN15O75808 1086 aa17.35■□□□□ 0.37
CCDC90B-205ENST00000525916 RC3H1Q5TC82 1133 aaKnown RBP17.35■□□□□ 0.37
CCDC90B-205ENST00000525916 JMYQ8N9B5 988 aa17.35■□□□□ 0.37
CCDC90B-205ENST00000525916 TIAM2Q8IVF5 1701 aa17.35■□□□□ 0.37
CCDC90B-205ENST00000525916 RPS6KA4O75676 772 aa17.34■□□□□ 0.37
CCDC90B-205ENST00000525916 FSTL1Q12841 308 aa17.34■□□□□ 0.37
CCDC90B-205ENST00000525916 DCAF5Q96JK2 942 aa17.34■□□□□ 0.37
CCDC90B-205ENST00000525916 RNF181Q9P0P0 153 aa17.34■□□□□ 0.37
CCDC90B-205ENST00000525916 DLEC1Q9Y238 1755 aa17.34■□□□□ 0.37
CCDC90B-205ENST00000525916 SCN11AQ9UI33 1791 aa17.33■□□□□ 0.37
CCDC90B-205ENST00000525916 KDM6AO15550 1401 aaPredicted RBP17.33■□□□□ 0.36
CCDC90B-205ENST00000525916 KDM2BQ8NHM5 1336 aa17.33■□□□□ 0.36
CCDC90B-205ENST00000525916 CDCA8Q53HL2 280 aa17.33■□□□□ 0.36
CCDC90B-205ENST00000525916 PIM2Q9P1W9 311 aa17.33■□□□□ 0.36
CCDC90B-205ENST00000525916 POLKQ9UBT6 870 aa17.33■□□□□ 0.36
CCDC90B-205ENST00000525916 ERVV-2B6SEH9 535 aa17.32■□□□□ 0.36
CCDC90B-205ENST00000525916 EIF4A2Q14240 407 aaKnown RBP17.32■□□□□ 0.36
CCDC90B-205ENST00000525916 RRAGCQ9HB90 399 aa17.32■□□□□ 0.36
CCDC90B-205ENST00000525916 SRP68Q9UHB9 627 aaKnown RBP17.32■□□□□ 0.36
CCDC90B-205ENST00000525916 DALRD3Q5D0E6 543 aaKnown RBP17.31■□□□□ 0.36
CCDC90B-205ENST00000525916 CHRNA5P30532 468 aa17.3■□□□□ 0.36
CCDC90B-205ENST00000525916 DDR1Q08345 913 aa17.3■□□□□ 0.36
CCDC90B-205ENST00000525916 FKBP8Q14318 412 aa17.3■□□□□ 0.36
CCDC90B-205ENST00000525916 USP42Q9H9J4 1324 aaKnown RBP17.29■□□□□ 0.36
CCDC90B-205ENST00000525916 CRKLP46109 303 aaKnown RBP17.29■□□□□ 0.36
CCDC90B-205ENST00000525916 TNS4Q8IZW8 715 aa17.29■□□□□ 0.36
CCDC90B-205ENST00000525916 NRXN2Q9P2S2 1712 aa17.29■□□□□ 0.36
CCDC90B-205ENST00000525916 PTCD1O75127 700 aaKnown RBP17.28■□□□□ 0.36
CCDC90B-205ENST00000525916 HSP90AB1P08238 724 aaKnown RBP17.28■□□□□ 0.36
CCDC90B-205ENST00000525916 TNNT2P45379 298 aaPredicted RBP17.28■□□□□ 0.36
CCDC90B-205ENST00000525916 CABP4P57796 275 aa17.28■□□□□ 0.36
CCDC90B-205ENST00000525916 RASSF7Q02833 373 aa17.27■□□□□ 0.36
CCDC90B-205ENST00000525916 ZNF530Q6P9A1 599 aaPredicted RBP17.27■□□□□ 0.36
CCDC90B-205ENST00000525916 DICER1Q9UPY3 1922 aaKnown RBP17.27■□□□□ 0.35
CCDC90B-205ENST00000525916 SMC1BQ8NDV3 1235 aa17.26■□□□□ 0.35
CCDC90B-205ENST00000525916 POLRMTO00411 1230 aaKnown RBP17.25■□□□□ 0.35
CCDC90B-205ENST00000525916 PLEKHO1Q53GL0 409 aaPredicted RBP17.25■□□□□ 0.35
CCDC90B-205ENST00000525916 PRELPP51888 382 aa17.24■□□□□ 0.35
CCDC90B-205ENST00000525916 CACNA1SQ13698 1873 aa17.24■□□□□ 0.35
CCDC90B-205ENST00000525916 HSPA1AP0DMV8 641 aaKnown RBP17.22■□□□□ 0.35
CCDC90B-205ENST00000525916 HSPA1BP0DMV9 641 aaKnown RBP17.22■□□□□ 0.35
CCDC90B-205ENST00000525916 MTHFSP49914 203 aa17.22■□□□□ 0.35
CCDC90B-205ENST00000525916 NFATC2IPQ8NCF5 419 aa17.22■□□□□ 0.35
CCDC90B-205ENST00000525916 ANKRD31Q8N7Z5 1873 aa17.22■□□□□ 0.35
CCDC90B-205ENST00000525916 ZC3H4Q9UPT8 1303 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms