RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 SLC16A10Q8TF71 515 aa24.81■■□□□ 1.56
TSPAN4-215ENST00000525334 ADAMTS7Q9UKP4 1686 aa24.79■■□□□ 1.56
TSPAN4-215ENST00000525334 NFATC2IPQ8NCF5 419 aa24.79■■□□□ 1.56
TSPAN4-215ENST00000525334 RSPH6AQ9H0K4 717 aa24.79■■□□□ 1.56
TSPAN4-215ENST00000525334 VIRMAQ69YN4 1812 aaKnown RBP24.79■■□□□ 1.56
TSPAN4-215ENST00000525334 MRC1P22897 1456 aa24.78■■□□□ 1.56
TSPAN4-215ENST00000525334 U2AF1L5P0DN76 240 aaPredicted RBP24.78■■□□□ 1.56
TSPAN4-215ENST00000525334 PRKAR2BP31323 418 aa24.78■■□□□ 1.56
TSPAN4-215ENST00000525334 U2AF1Q01081 240 aaKnown RBP eCLIP24.78■■□□□ 1.56
TSPAN4-215ENST00000525334 ITPK1Q13572 414 aa24.78■■□□□ 1.56
TSPAN4-215ENST00000525334 LGR6Q9HBX8 967 aa24.78■■□□□ 1.56
TSPAN4-215ENST00000525334 RNMTO43148 476 aaKnown RBP24.77■■□□□ 1.56
TSPAN4-215ENST00000525334 ATP6V1AP38606 617 aa24.77■■□□□ 1.56
TSPAN4-215ENST00000525334 LINC00116Q8NCU8 138 aa24.77■■□□□ 1.56
TSPAN4-215ENST00000525334 ZNF831Q5JPB2 1677 aa24.76■■□□□ 1.55
TSPAN4-215ENST00000525334 GAS2L2Q8NHY3 880 aa24.76■■□□□ 1.55
TSPAN4-215ENST00000525334 SLC52A2Q9HAB3 445 aa24.76■■□□□ 1.55
TSPAN4-215ENST00000525334 RALBP1Q15311 655 aa24.75■■□□□ 1.55
TSPAN4-215ENST00000525334 COL23A1Q86Y22 540 aaPredicted RBP24.75■■□□□ 1.55
TSPAN4-215ENST00000525334 AK7Q96M32 723 aa24.75■■□□□ 1.55
TSPAN4-215ENST00000525334 SLC4A9Q96Q91 983 aa24.75■■□□□ 1.55
TSPAN4-215ENST00000525334 RBM42Q9BTD8 480 aaKnown RBP24.75■■□□□ 1.55
TSPAN4-215ENST00000525334 MAP3K5Q99683 1374 aa24.75■■□□□ 1.55
TSPAN4-215ENST00000525334 PHACTR3Q96KR7 559 aa24.74■■□□□ 1.55
TSPAN4-215ENST00000525334 UBR3Q6ZT12 1888 aa24.73■■□□□ 1.55
TSPAN4-215ENST00000525334 ARXQ96QS3 562 aa24.73■■□□□ 1.55
TSPAN4-215ENST00000525334 COL24A1Q17RW2 1714 aa24.72■■□□□ 1.55
TSPAN4-215ENST00000525334 MSH5O43196 834 aa24.72■■□□□ 1.55
TSPAN4-215ENST00000525334 AMIGO3Q86WK7 504 aa24.72■■□□□ 1.55
TSPAN4-215ENST00000525334 GNAT3A8MTJ3 354 aa24.71■■□□□ 1.55
TSPAN4-215ENST00000525334 FCHSD2O94868 740 aa24.71■■□□□ 1.55
TSPAN4-215ENST00000525334 COL5A3P25940 1745 aaPredicted RBP24.71■■□□□ 1.55
TSPAN4-215ENST00000525334 PTCD1O75127 700 aaKnown RBP24.7■■□□□ 1.54
TSPAN4-215ENST00000525334 FLAD1Q8NFF5 587 aa24.7■■□□□ 1.54
TSPAN4-215ENST00000525334 SYT17Q9BSW7 474 aa24.7■■□□□ 1.54
TSPAN4-215ENST00000525334 FHDC1Q9C0D6 1143 aaPredicted RBP24.7■■□□□ 1.54
TSPAN4-215ENST00000525334 PHF14O94880 888 aa24.69■■□□□ 1.54
TSPAN4-215ENST00000525334 SMIM5Q71RC9 77 aa24.69■■□□□ 1.54
TSPAN4-215ENST00000525334 GNPATO15228 680 aa24.68■■□□□ 1.54
TSPAN4-215ENST00000525334 POLD1P28340 1107 aa24.68■■□□□ 1.54
TSPAN4-215ENST00000525334 CICQ96RK0 1608 aaPredicted RBP24.68■■□□□ 1.54
TSPAN4-215ENST00000525334 TJP1Q07157 1748 aa24.67■■□□□ 1.54
TSPAN4-215ENST00000525334 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.67■■□□□ 1.54
TSPAN4-215ENST00000525334 IL17REQ8NFR9 667 aa24.67■■□□□ 1.54
TSPAN4-215ENST00000525334 MYBBP1AQ9BQG0 1328 aaKnown RBP24.66■■□□□ 1.54
TSPAN4-215ENST00000525334 SSFA2P28290 1259 aa24.66■■□□□ 1.54
TSPAN4-215ENST00000525334 SLC39A6Q13433 755 aa24.66■■□□□ 1.54
TSPAN4-215ENST00000525334 KCPQ6ZWJ8 1503 aa24.66■■□□□ 1.54
TSPAN4-215ENST00000525334 DCAF8L1A6NGE4 600 aa24.65■■□□□ 1.54
TSPAN4-215ENST00000525334 SIPA1L3O60292 1781 aaPredicted RBP24.65■■□□□ 1.54
TSPAN4-215ENST00000525334 CNTNAP4Q9C0A0 1308 aa24.64■■□□□ 1.54
TSPAN4-215ENST00000525334 MSL1Q68DK7 614 aa24.64■■□□□ 1.54
TSPAN4-215ENST00000525334 CEMIPQ8WUJ3 1361 aa24.64■■□□□ 1.53
TSPAN4-215ENST00000525334 TEFQ10587 303 aa24.63■■□□□ 1.53
TSPAN4-215ENST00000525334 RC3H1Q5TC82 1133 aaKnown RBP24.63■■□□□ 1.53
TSPAN4-215ENST00000525334 UBR2Q8IWV8 1755 aa24.62■■□□□ 1.53
TSPAN4-215ENST00000525334 RTCBQ9Y3I0 505 aaKnown RBP24.61■■□□□ 1.53
TSPAN4-215ENST00000525334 MYH14Q7Z406 1995 aaKnown RBP24.61■■□□□ 1.53
TSPAN4-215ENST00000525334 PLEKHF1Q96S99 279 aa24.6■■□□□ 1.53
TSPAN4-215ENST00000525334 CRKLP46109 303 aaKnown RBP24.59■■□□□ 1.53
TSPAN4-215ENST00000525334 PRKRIP1Q9H875 184 aaPredicted RBP24.59■■□□□ 1.53
TSPAN4-215ENST00000525334 RPS6KA4O75676 772 aa24.58■■□□□ 1.53
TSPAN4-215ENST00000525334 NEFMP07197 916 aa24.58■■□□□ 1.53
TSPAN4-215ENST00000525334 DNAJC10Q8IXB1 793 aa24.58■■□□□ 1.53
TSPAN4-215ENST00000525334 TTC5Q8N0Z6 440 aa24.58■■□□□ 1.53
TSPAN4-215ENST00000525334 RTF1Q92541 710 aaKnown RBP24.58■■□□□ 1.53
TSPAN4-215ENST00000525334 MCM10Q7L590 875 aa24.57■■□□□ 1.52
TSPAN4-215ENST00000525334 TRAPPC3LQ5T215 181 aa24.56■■□□□ 1.52
TSPAN4-215ENST00000525334 ZNF790Q6PG37 636 aa24.56■■□□□ 1.52
TSPAN4-215ENST00000525334 ZNF316A6NFI3 1004 aaPredicted RBP24.55■■□□□ 1.52
TSPAN4-215ENST00000525334 HTATSF1O43719 755 aaKnown RBP24.55■■□□□ 1.52
TSPAN4-215ENST00000525334 ADRA2BP18089 450 aa24.55■■□□□ 1.52
TSPAN4-215ENST00000525334 DCTN1Q14203 1278 aa24.55■■□□□ 1.52
TSPAN4-215ENST00000525334 VSIG10Q8N0Z9 540 aa24.55■■□□□ 1.52
TSPAN4-215ENST00000525334 KLHL34Q8N239 644 aa24.55■■□□□ 1.52
TSPAN4-215ENST00000525334 PNNQ9H307 717 aaKnown RBP24.55■■□□□ 1.52
TSPAN4-215ENST00000525334 C4AP0C0L4 1744 aa24.55■■□□□ 1.52
TSPAN4-215ENST00000525334 DLG5Q8TDM6 1919 aa24.55■■□□□ 1.52
TSPAN4-215ENST00000525334 INTS5Q6P9B9 1019 aaKnown RBP24.54■■□□□ 1.52
TSPAN4-215ENST00000525334 ARHGEF1Q92888 912 aaKnown RBP24.54■■□□□ 1.52
TSPAN4-215ENST00000525334 MAPK8IP3Q9UPT6 1336 aa24.54■■□□□ 1.52
TSPAN4-215ENST00000525334 BTBD11A6QL63 1104 aa24.53■■□□□ 1.52
TSPAN4-215ENST00000525334 CYP19A1P11511 503 aaPredicted RBP24.53■■□□□ 1.52
TSPAN4-215ENST00000525334 ZNF496Q96IT1 587 aaPredicted RBP24.53■■□□□ 1.52
TSPAN4-215ENST00000525334 NFE2L2Q16236 605 aa24.52■■□□□ 1.52
TSPAN4-215ENST00000525334 CCDC87Q9NVE4 849 aa24.52■■□□□ 1.52
TSPAN4-215ENST00000525334 HEG1Q9ULI3 1381 aa24.52■■□□□ 1.52
TSPAN4-215ENST00000525334 RFC4P35249 363 aa24.51■■□□□ 1.51
TSPAN4-215ENST00000525334 KCNQ3O43525 872 aa24.5■■□□□ 1.51
TSPAN4-215ENST00000525334 NLGN2Q8NFZ4 835 aa24.49■■□□□ 1.51
TSPAN4-215ENST00000525334 FMNL2Q96PY5 1086 aa24.49■■□□□ 1.51
TSPAN4-215ENST00000525334 UTRNP46939 3433 aa24.49■■□□□ 1.51
TSPAN4-215ENST00000525334 YY1P25490 414 aa24.48■■□□□ 1.51
TSPAN4-215ENST00000525334 SOS1Q07889 1333 aaPredicted RBP24.48■■□□□ 1.51
TSPAN4-215ENST00000525334 ZBTB1Q9Y2K1 713 aa24.48■■□□□ 1.51
TSPAN4-215ENST00000525334 CD2APQ9Y5K6 639 aa24.48■■□□□ 1.51
TSPAN4-215ENST00000525334 GYS1P13807 737 aa24.47■■□□□ 1.51
TSPAN4-215ENST00000525334 WDR43Q15061 677 aaKnown RBP eCLIP24.47■■□□□ 1.51
TSPAN4-215ENST00000525334 STARD3NLO95772 234 aa24.46■■□□□ 1.51
TSPAN4-215ENST00000525334 SRP68Q9UHB9 627 aaKnown RBP24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms