RNA–Protein interactions for RNA: ENST00000524205.3

CDRT4-203, CMT1A duplicated region transcript 4, humanhuman

APPRIS ALT2 TSL 2

Gene CDRT4, Length 632 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4-203ENST00000524205 U2AF1L5P0DN76 240 aaPredicted RBP13.96□□□□□ -0.17
CDRT4-203ENST00000524205 U2AF1Q01081 240 aaKnown RBP eCLIP13.96□□□□□ -0.171e-11■■■□□ 15.4
CDRT4-203ENST00000524205 ZNF530Q6P9A1 599 aaPredicted RBP13.96□□□□□ -0.17
CDRT4-203ENST00000524205 ITGB4P16144 1822 aa13.95□□□□□ -0.18
CDRT4-203ENST00000524205 VIRMAQ69YN4 1812 aaKnown RBP13.95□□□□□ -0.18
CDRT4-203ENST00000524205 PRIM1P49642 420 aaKnown RBP13.95□□□□□ -0.18
CDRT4-203ENST00000524205 KCNQ4P56696 695 aa13.95□□□□□ -0.18
CDRT4-203ENST00000524205 SF3B2Q13435 895 aaKnown RBP13.95□□□□□ -0.18
CDRT4-203ENST00000524205 PHACTR3Q96KR7 559 aa13.95□□□□□ -0.18
CDRT4-203ENST00000524205 PCDH11XQ9BZA7 1347 aa13.94□□□□□ -0.18
CDRT4-203ENST00000524205 PCDH11YQ9BZA8 1340 aa13.94□□□□□ -0.18
CDRT4-203ENST00000524205 PHKG2P15735 406 aa13.94□□□□□ -0.18
CDRT4-203ENST00000524205 PRKAR2BP31323 418 aa13.94□□□□□ -0.18
CDRT4-203ENST00000524205 MTHFSDQ2M296 383 aaKnown RBP13.94□□□□□ -0.18
CDRT4-203ENST00000524205 RSPH6AQ9H0K4 717 aa13.94□□□□□ -0.18
CDRT4-203ENST00000524205 SPG7Q9UQ90 795 aa13.94□□□□□ -0.18
CDRT4-203ENST00000524205 KDRP35968 1356 aa13.94□□□□□ -0.18
CDRT4-203ENST00000524205 PLEKHO1Q53GL0 409 aaPredicted RBP13.93□□□□□ -0.18
CDRT4-203ENST00000524205 MPRIPQ6WCQ1 1025 aa13.93□□□□□ -0.18
CDRT4-203ENST00000524205 CCDC146Q8IYE0 955 aa13.93□□□□□ -0.18
CDRT4-203ENST00000524205 BBXQ8WY36 941 aaPredicted RBP13.92□□□□□ -0.18
CDRT4-203ENST00000524205 KDM6AO15550 1401 aaPredicted RBP13.91□□□□□ -0.18
CDRT4-203ENST00000524205 BAG6P46379 1132 aa13.91□□□□□ -0.18
CDRT4-203ENST00000524205 IFNL2Q8IZJ0 200 aa13.91□□□□□ -0.18
CDRT4-203ENST00000524205 LGR6Q9HBX8 967 aa13.91□□□□□ -0.18
CDRT4-203ENST00000524205 RIOK3O14730 519 aaKnown RBP13.9□□□□□ -0.18
CDRT4-203ENST00000524205 ANP32CO43423 234 aa13.9□□□□□ -0.18
CDRT4-203ENST00000524205 CAMKK2Q96RR4 588 aa13.9□□□□□ -0.18
CDRT4-203ENST00000524205 BCL11BQ9C0K0 894 aaPredicted RBP13.9□□□□□ -0.18
CDRT4-203ENST00000524205 NUDCQ9Y266 331 aa13.9□□□□□ -0.18
CDRT4-203ENST00000524205 NUP188Q5SRE5 1749 aa13.9□□□□□ -0.18
CDRT4-203ENST00000524205 RREB1Q92766 1687 aa13.89□□□□□ -0.19
CDRT4-203ENST00000524205 PSDA5PKW4 1024 aaPredicted RBP13.89□□□□□ -0.19
CDRT4-203ENST00000524205 PLCB2Q00722 1185 aa13.89□□□□□ -0.19
CDRT4-203ENST00000524205 DCTN1Q14203 1278 aa13.89□□□□□ -0.19
CDRT4-203ENST00000524205 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.89□□□□□ -0.19
CDRT4-203ENST00000524205 DLG5Q8TDM6 1919 aa13.89□□□□□ -0.19
CDRT4-203ENST00000524205 C1orf141Q5JVX7 400 aa13.88□□□□□ -0.19
CDRT4-203ENST00000524205 RRP7AQ9Y3A4 280 aaKnown RBP13.88□□□□□ -0.19
CDRT4-203ENST00000524205 SCN11AQ9UI33 1791 aa13.88□□□□□ -0.19
CDRT4-203ENST00000524205 PIGBQ92521 554 aa13.87□□□□□ -0.19
CDRT4-203ENST00000524205 TSPYL2Q9H2G4 693 aaPredicted RBP13.87□□□□□ -0.19
CDRT4-203ENST00000524205 ADAMTS8Q9UP79 889 aa13.87□□□□□ -0.19
CDRT4-203ENST00000524205 BCL9O00512 1426 aa13.87□□□□□ -0.19
CDRT4-203ENST00000524205 NKX1-1Q15270 411 aaPredicted RBP13.86□□□□□ -0.19
CDRT4-203ENST00000524205 AMOTQ4VCS5 1084 aa13.86□□□□□ -0.19
CDRT4-203ENST00000524205 CCDC125Q86Z20 511 aa13.86□□□□□ -0.19
CDRT4-203ENST00000524205 PLEKHF1Q96S99 279 aa13.86□□□□□ -0.19
CDRT4-203ENST00000524205 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.86□□□□□ -0.192e-7■■□□□ 12.1
CDRT4-203ENST00000524205 ASAP1Q9ULH1 1129 aa13.86□□□□□ -0.19
CDRT4-203ENST00000524205 RNMTO43148 476 aaKnown RBP13.85□□□□□ -0.19
CDRT4-203ENST00000524205 TXNRD1Q16881 649 aa13.85□□□□□ -0.19
CDRT4-203ENST00000524205 SMIM5Q71RC9 77 aa13.85□□□□□ -0.19
CDRT4-203ENST00000524205 MCM10Q7L590 875 aa13.85□□□□□ -0.19
CDRT4-203ENST00000524205 RNF25Q96BH1 459 aaPredicted RBP13.85□□□□□ -0.19
CDRT4-203ENST00000524205 THUMPD2Q9BTF0 503 aaKnown RBP13.85□□□□□ -0.19
CDRT4-203ENST00000524205 ANO8Q9HCE9 1232 aaPredicted RBP13.85□□□□□ -0.19
CDRT4-203ENST00000524205 MRS2Q9HD23 443 aa13.85□□□□□ -0.19
CDRT4-203ENST00000524205 LRRC4BQ9NT99 713 aa13.85□□□□□ -0.19
CDRT4-203ENST00000524205 PYGBP11216 843 aa13.84□□□□□ -0.19
CDRT4-203ENST00000524205 SLC39A6Q13433 755 aa13.84□□□□□ -0.19
CDRT4-203ENST00000524205 WDR43Q15061 677 aaKnown RBP eCLIP13.84□□□□□ -0.19
CDRT4-203ENST00000524205 NEUROD2Q15784 382 aa13.84□□□□□ -0.19
CDRT4-203ENST00000524205 AKAP4Q5JQC9 854 aa13.84□□□□□ -0.19
CDRT4-203ENST00000524205 NFATC2IPQ8NCF5 419 aa13.84□□□□□ -0.19
CDRT4-203ENST00000524205 TMOD3Q9NYL9 352 aa13.84□□□□□ -0.19
CDRT4-203ENST00000524205 LY75O60449 1722 aa13.84□□□□□ -0.19
CDRT4-203ENST00000524205 FCHSD2O94868 740 aa13.83□□□□□ -0.2
CDRT4-203ENST00000524205 CABP4P57796 275 aa13.83□□□□□ -0.2
CDRT4-203ENST00000524205 R3HDM1Q15032 1099 aaKnown RBP13.83□□□□□ -0.2
CDRT4-203ENST00000524205 IL17REQ8NFR9 667 aa13.83□□□□□ -0.2
CDRT4-203ENST00000524205 ATG3Q9NT62 314 aa13.83□□□□□ -0.2
CDRT4-203ENST00000524205 MAP3K5Q99683 1374 aa13.83□□□□□ -0.2
CDRT4-203ENST00000524205 HS6ST3Q8IZP7 471 aa13.82□□□□□ -0.2
CDRT4-203ENST00000524205 DCAF5Q96JK2 942 aa13.82□□□□□ -0.2
CDRT4-203ENST00000524205 SGIP1Q9BQI5 828 aa13.82□□□□□ -0.2
CDRT4-203ENST00000524205 PDGFDQ9GZP0 370 aaPredicted RBP13.82□□□□□ -0.2
CDRT4-203ENST00000524205 GNAT3A8MTJ3 354 aa13.81□□□□□ -0.2
CDRT4-203ENST00000524205 KCNQ3O43525 872 aa13.81□□□□□ -0.2
CDRT4-203ENST00000524205 ZNF827Q17R98 1081 aa13.81□□□□□ -0.2
CDRT4-203ENST00000524205 DIEXFQ68CQ4 756 aaKnown RBP13.81□□□□□ -0.2
CDRT4-203ENST00000524205 GAS2L2Q8NHY3 880 aa13.81□□□□□ -0.2
CDRT4-203ENST00000524205 ADAMTS7Q9UKP4 1686 aa13.81□□□□□ -0.2
CDRT4-203ENST00000524205 PALLDQ8WX93 1383 aa13.81□□□□□ -0.2
CDRT4-203ENST00000524205 TUBGCP6Q96RT7 1819 aa13.8□□□□□ -0.2
CDRT4-203ENST00000524205 PLSCR1O15162 318 aa13.8□□□□□ -0.2
CDRT4-203ENST00000524205 FAM9BQ8IZU0 186 aa13.8□□□□□ -0.2
CDRT4-203ENST00000524205 SLC4A9Q96Q91 983 aa13.8□□□□□ -0.2
CDRT4-203ENST00000524205 MIS18AQ9NYP9 233 aa13.8□□□□□ -0.2
CDRT4-203ENST00000524205 MAPK8IP3Q9UPT6 1336 aa13.8□□□□□ -0.2
CDRT4-203ENST00000524205 RGPD3A6NKT7 1758 aaPredicted RBP13.8□□□□□ -0.2
CDRT4-203ENST00000524205 SIPA1L3O60292 1781 aaPredicted RBP13.8□□□□□ -0.2
CDRT4-203ENST00000524205 RGPD4Q7Z3J3 1758 aa13.8□□□□□ -0.2
CDRT4-203ENST00000524205 PTCD1O75127 700 aaKnown RBP13.79□□□□□ -0.2
CDRT4-203ENST00000524205 ZNF467Q7Z7K2 595 aaPredicted RBP13.79□□□□□ -0.2
CDRT4-203ENST00000524205 SLC52A2Q9HAB3 445 aa13.79□□□□□ -0.2
CDRT4-203ENST00000524205 CCNL1Q9UK58 526 aaPredicted RBP13.79□□□□□ -0.2
CDRT4-203ENST00000524205 SALL2Q9Y467 1007 aaPredicted RBP13.79□□□□□ -0.2
CDRT4-203ENST00000524205 PAPPAQ13219 1627 aa13.79□□□□□ -0.2
CDRT4-203ENST00000524205 TAF1LQ8IZX4 1826 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms