RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 GNPATO15228 680 aa24.85■■□□□ 1.57
PVT1-220ENST00000524165 CYP27B1O15528 508 aa24.85■■□□□ 1.57
PVT1-220ENST00000524165 DPEP1P16444 411 aa24.85■■□□□ 1.57
PVT1-220ENST00000524165 PIGBQ92521 554 aa24.85■■□□□ 1.57
PVT1-220ENST00000524165 SBF1O95248 1867 aa24.84■■□□□ 1.57
PVT1-220ENST00000524165 FBLN1P23142 703 aa24.84■■□□□ 1.57
PVT1-220ENST00000524165 RRAGCQ9HB90 399 aa24.84■■□□□ 1.57
PVT1-220ENST00000524165 C4AP0C0L4 1744 aa24.83■■□□□ 1.57
PVT1-220ENST00000524165 NLGN1Q8N2Q7 840 aa24.83■■□□□ 1.57
PVT1-220ENST00000524165 PUS7Q96PZ0 661 aaKnown RBP24.83■■□□□ 1.57
PVT1-220ENST00000524165 CCDC87Q9NVE4 849 aa24.82■■□□□ 1.56
PVT1-220ENST00000524165 TMF1P82094 1093 aa24.8■■□□□ 1.56
PVT1-220ENST00000524165 KCNA3P22001 575 aa24.79■■□□□ 1.56
PVT1-220ENST00000524165 ITPK1Q13572 414 aa24.79■■□□□ 1.56
PVT1-220ENST00000524165 NKX1-1Q15270 411 aaPredicted RBP24.79■■□□□ 1.56
PVT1-220ENST00000524165 RNF181Q9P0P0 153 aa24.79■■□□□ 1.56
PVT1-220ENST00000524165 DCAF5Q96JK2 942 aa24.78■■□□□ 1.56
PVT1-220ENST00000524165 ATP6V1AP38606 617 aa24.77■■□□□ 1.56
PVT1-220ENST00000524165 RRS1Q15050 365 aaKnown RBP24.77■■□□□ 1.56
PVT1-220ENST00000524165 TRAPPC3LQ5T215 181 aa24.77■■□□□ 1.56
PVT1-220ENST00000524165 PIM2Q9P1W9 311 aa24.77■■□□□ 1.56
PVT1-220ENST00000524165 INSRP06213 1382 aa24.76■■□□□ 1.55
PVT1-220ENST00000524165 RTCBQ9Y3I0 505 aaKnown RBP24.75■■□□□ 1.55
PVT1-220ENST00000524165 PARP3Q9Y6F1 533 aa24.74■■□□□ 1.55
PVT1-220ENST00000524165 ZC3H4Q9UPT8 1303 aaKnown RBP24.74■■□□□ 1.55
PVT1-220ENST00000524165 ZNF831Q5JPB2 1677 aa24.73■■□□□ 1.55
PVT1-220ENST00000524165 ADRA2BP18089 450 aa24.73■■□□□ 1.55
PVT1-220ENST00000524165 DALRD3Q5D0E6 543 aaKnown RBP24.73■■□□□ 1.55
PVT1-220ENST00000524165 TMOD3Q9NYL9 352 aa24.73■■□□□ 1.55
PVT1-220ENST00000524165 ASAP1Q9ULH1 1129 aa24.73■■□□□ 1.55
PVT1-220ENST00000524165 GYS1P13807 737 aa24.71■■□□□ 1.55
PVT1-220ENST00000524165 HSP90AB2PQ58FF8 381 aa24.71■■□□□ 1.55
PVT1-220ENST00000524165 KIF24Q5T7B8 1368 aa24.7■■□□□ 1.55
PVT1-220ENST00000524165 ARHGEF1Q92888 912 aaKnown RBP24.7■■□□□ 1.54
PVT1-220ENST00000524165 VEGFAP15692 232 aaPredicted RBP24.69■■□□□ 1.54
PVT1-220ENST00000524165 CARD11Q9BXL7 1154 aa24.69■■□□□ 1.54
PVT1-220ENST00000524165 SPG7Q9UQ90 795 aa24.69■■□□□ 1.54
PVT1-220ENST00000524165 COL5A3P25940 1745 aaPredicted RBP24.69■■□□□ 1.54
PVT1-220ENST00000524165 FLT4P35916 1363 aa24.68■■□□□ 1.54
PVT1-220ENST00000524165 KDRP35968 1356 aa24.67■■□□□ 1.54
PVT1-220ENST00000524165 RC3H1Q5TC82 1133 aaKnown RBP24.67■■□□□ 1.54
PVT1-220ENST00000524165 NCAPD2Q15021 1401 aa24.67■■□□□ 1.54
PVT1-220ENST00000524165 RFC4P35249 363 aa24.66■■□□□ 1.54
PVT1-220ENST00000524165 ATG3Q9NT62 314 aa24.66■■□□□ 1.54
PVT1-220ENST00000524165 KDM6AO15550 1401 aaPredicted RBP24.66■■□□□ 1.54
PVT1-220ENST00000524165 GLTPD2A6NH11 291 aa24.64■■□□□ 1.54
PVT1-220ENST00000524165 FYB1O15117 783 aa24.64■■□□□ 1.54
PVT1-220ENST00000524165 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.64■■□□□ 1.54
PVT1-220ENST00000524165 PCDH10Q9P2E7 1040 aa24.64■■□□□ 1.54
PVT1-220ENST00000524165 CNTNAP4Q9C0A0 1308 aa24.63■■□□□ 1.53
PVT1-220ENST00000524165 RPS6KA4O75676 772 aa24.63■■□□□ 1.53
PVT1-220ENST00000524165 MYH14Q7Z406 1995 aaKnown RBP24.63■■□□□ 1.53
PVT1-220ENST00000524165 SIN3AQ96ST3 1273 aa24.62■■□□□ 1.53
PVT1-220ENST00000524165 GGNBP2Q9H3C7 697 aa24.62■■□□□ 1.53
PVT1-220ENST00000524165 PRDM10Q9NQV6 1147 aa24.62■■□□□ 1.53
PVT1-220ENST00000524165 CCDC88AQ3V6T2 1871 aa24.61■■□□□ 1.53
PVT1-220ENST00000524165 SLC4A9Q96Q91 983 aa24.6■■□□□ 1.53
PVT1-220ENST00000524165 TIAM2Q8IVF5 1701 aa24.6■■□□□ 1.53
PVT1-220ENST00000524165 KIF20BQ96Q89 1820 aa24.59■■□□□ 1.53
PVT1-220ENST00000524165 LMNB1P20700 586 aa24.59■■□□□ 1.53
PVT1-220ENST00000524165 IFNL2Q8IZJ0 200 aa24.59■■□□□ 1.53
PVT1-220ENST00000524165 TONSLQ96HA7 1378 aa24.58■■□□□ 1.53
PVT1-220ENST00000524165 PHKG2P15735 406 aa24.58■■□□□ 1.53
PVT1-220ENST00000524165 CHRNA5P30532 468 aa24.58■■□□□ 1.53
PVT1-220ENST00000524165 CREBZFQ9NS37 354 aa24.58■■□□□ 1.53
PVT1-220ENST00000524165 FOXN1O15353 648 aa24.57■■□□□ 1.52
PVT1-220ENST00000524165 RASSF7Q02833 373 aa24.57■■□□□ 1.52
PVT1-220ENST00000524165 DDR1Q08345 913 aa24.55■■□□□ 1.52
PVT1-220ENST00000524165 NEUROD1Q13562 356 aa24.55■■□□□ 1.52
PVT1-220ENST00000524165 RBM42Q9BTD8 480 aaKnown RBP24.55■■□□□ 1.52
PVT1-220ENST00000524165 SLC24A1O60721 1099 aa24.54■■□□□ 1.52
PVT1-220ENST00000524165 TESK2Q96S53 571 aa24.54■■□□□ 1.52
PVT1-220ENST00000524165 MKRN1Q9UHC7 482 aaKnown RBP24.54■■□□□ 1.52
PVT1-220ENST00000524165 DLEC1Q9Y238 1755 aa24.53■■□□□ 1.52
PVT1-220ENST00000524165 POTECB2RU33 542 aa24.53■■□□□ 1.52
PVT1-220ENST00000524165 FKBP8Q14318 412 aa24.53■■□□□ 1.52
PVT1-220ENST00000524165 ANKRD26Q9UPS8 1709 aa24.52■■□□□ 1.52
PVT1-220ENST00000524165 USP42Q9H9J4 1324 aaKnown RBP24.52■■□□□ 1.52
PVT1-220ENST00000524165 ERVV-2B6SEH9 535 aa24.51■■□□□ 1.51
PVT1-220ENST00000524165 CTCFP49711 727 aaPredicted RBP24.51■■□□□ 1.51
PVT1-220ENST00000524165 POLRMTO00411 1230 aaKnown RBP24.5■■□□□ 1.51
PVT1-220ENST00000524165 SRP68Q9UHB9 627 aaKnown RBP24.5■■□□□ 1.51
PVT1-220ENST00000524165 FAM161AQ3B820 660 aa24.49■■□□□ 1.51
PVT1-220ENST00000524165 DPY19L2Q6NUT2 758 aa24.49■■□□□ 1.51
PVT1-220ENST00000524165 EMILIN1Q9Y6C2 1016 aa24.49■■□□□ 1.51
PVT1-220ENST00000524165 CNTNAP1P78357 1384 aa24.49■■□□□ 1.51
PVT1-220ENST00000524165 DICER1Q9UPY3 1922 aaKnown RBP24.49■■□□□ 1.51
PVT1-220ENST00000524165 TM4SF1P30408 202 aa24.48■■□□□ 1.51
PVT1-220ENST00000524165 AFDNP55196 1824 aaKnown RBP24.48■■□□□ 1.51
PVT1-220ENST00000524165 AIDAQ96BJ3 306 aa24.48■■□□□ 1.51
PVT1-220ENST00000524165 EYA1Q99502 592 aa24.48■■□□□ 1.51
PVT1-220ENST00000524165 CHADLQ6NUI6 762 aa24.47■■□□□ 1.51
PVT1-220ENST00000524165 ADAMTS7Q9UKP4 1686 aa24.46■■□□□ 1.51
PVT1-220ENST00000524165 CRKLP46109 303 aaKnown RBP24.46■■□□□ 1.51
PVT1-220ENST00000524165 VIRMAQ69YN4 1812 aaKnown RBP24.46■■□□□ 1.51
PVT1-220ENST00000524165 WASHC2AQ641Q2 1341 aa24.45■■□□□ 1.5
PVT1-220ENST00000524165 NRXN2Q9P2S2 1712 aa24.45■■□□□ 1.5
PVT1-220ENST00000524165 ST20-MTHFSA0A0A6YYL1 179 aa24.44■■□□□ 1.5
PVT1-220ENST00000524165 HSP90AB1P08238 724 aaKnown RBP24.43■■□□□ 1.5
PVT1-220ENST00000524165 TTLL6Q8N841 843 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms