RNA–Protein interactions for RNA: ENST00000524057.3

SORBS3-222, Transcript of sorbin and SH3 domain containing 3, human

TSL 3

Gene SORBS3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS3-222	ENST00000524057	KIAA1551	Q9HCM1	1747 aa		15.23	■□□□□ 0.03
SORBS3-222	ENST00000524057	KCP	Q6ZWJ8	1503 aa		15.22	■□□□□ 0.03
SORBS3-222	ENST00000524057	RRS1	Q15050	365 aa	Known RBP	15.22	■□□□□ 0.03
SORBS3-222	ENST00000524057	ATP6V1A	P38606	617 aa		15.21	■□□□□ 0.03
SORBS3-222	ENST00000524057	TMF1	P82094	1093 aa		15.21	■□□□□ 0.03
SORBS3-222	ENST00000524057	TRAPPC3L	Q5T215	181 aa		15.21	■□□□□ 0.03
SORBS3-222	ENST00000524057	PLEKHG2	Q9H7P9	1386 aa		15.21	■□□□□ 0.02
SORBS3-222	ENST00000524057	KIF13B	Q9NQT8	1826 aa		15.2	■□□□□ 0.02
SORBS3-222	ENST00000524057	NKX1-1	Q15270	411 aa	Predicted RBP	15.2	■□□□□ 0.02
SORBS3-222	ENST00000524057	CCDC87	Q9NVE4	849 aa		15.2	■□□□□ 0.02
SORBS3-222	ENST00000524057	RNF181	Q9P0P0	153 aa		15.2	■□□□□ 0.02
SORBS3-222	ENST00000524057	ASAP1	Q9ULH1	1129 aa		15.2	■□□□□ 0.02
SORBS3-222	ENST00000524057	C10orf71	Q711Q0	1435 aa		15.19	■□□□□ 0.02
SORBS3-222	ENST00000524057	HSP90AB2P	Q58FF8	381 aa		15.19	■□□□□ 0.02
SORBS3-222	ENST00000524057	DCAF5	Q96JK2	942 aa		15.19	■□□□□ 0.02
SORBS3-222	ENST00000524057	PIM2	Q9P1W9	311 aa		15.19	■□□□□ 0.02
SORBS3-222	ENST00000524057	ARHGEF1	Q92888	912 aa	Known RBP	15.18	■□□□□ 0.02
SORBS3-222	ENST00000524057	PUS7	Q96PZ0	661 aa	Known RBP	15.18	■□□□□ 0.02
SORBS3-222	ENST00000524057	MAP2	P11137	1827 aa	Known RBP	15.17	■□□□□ 0.02
SORBS3-222	ENST00000524057	ITGB4	P16144	1822 aa		15.17	■□□□□ 0.02
SORBS3-222	ENST00000524057	RTL1	A6NKG5	1358 aa		15.17	■□□□□ 0.02
SORBS3-222	ENST00000524057	DALRD3	Q5D0E6	543 aa	Known RBP	15.17	■□□□□ 0.02
SORBS3-222	ENST00000524057	RTCB	Q9Y3I0	505 aa	Known RBP	15.17	■□□□□ 0.02
SORBS3-222	ENST00000524057	TONSL	Q96HA7	1378 aa		15.16	■□□□□ 0.02
SORBS3-222	ENST00000524057	GYS1	P13807	737 aa		15.16	■□□□□ 0.02
SORBS3-222	ENST00000524057	ATG3	Q9NT62	314 aa		15.16	■□□□□ 0.02
SORBS3-222	ENST00000524057	PARP3	Q9Y6F1	533 aa		15.16	■□□□□ 0.02
SORBS3-222	ENST00000524057	TMOD3	Q9NYL9	352 aa		15.15	■□□□□ 0.02
SORBS3-222	ENST00000524057	SMG6	Q86US8	1419 aa	Known RBP	15.15	■□□□□ 0.02
SORBS3-222	ENST00000524057	FYB1	O15117	783 aa		15.14	■□□□□ 0.01
SORBS3-222	ENST00000524057	VEGFA	P15692	232 aa	Predicted RBP	15.14	■□□□□ 0.01
SORBS3-222	ENST00000524057	CARD11	Q9BXL7	1154 aa		15.14	■□□□□ 0.01
SORBS3-222	ENST00000524057	INSR	P06213	1382 aa		15.13	■□□□□ 0.01
SORBS3-222	ENST00000524057	RFC4	P35249	363 aa		15.13	■□□□□ 0.01
SORBS3-222	ENST00000524057	BRCA1	P38398	1863 aa	Known RBP	15.13	■□□□□ 0.01
SORBS3-222	ENST00000524057	SLC4A9	Q96Q91	983 aa		15.13	■□□□□ 0.01
SORBS3-222	ENST00000524057	GGNBP2	Q9H3C7	697 aa		15.13	■□□□□ 0.01
SORBS3-222	ENST00000524057	CLSPN	Q9HAW4	1339 aa		15.13	■□□□□ 0.01
SORBS3-222	ENST00000524057	ADRA2B	P18089	450 aa		15.12	■□□□□ 0.01
SORBS3-222	ENST00000524057	CHRNA5	P30532	468 aa		15.12	■□□□□ 0.01
SORBS3-222	ENST00000524057	RC3H1	Q5TC82	1133 aa	Known RBP	15.12	■□□□□ 0.01
SORBS3-222	ENST00000524057	SPG7	Q9UQ90	795 aa		15.12	■□□□□ 0.01
SORBS3-222	ENST00000524057	PKD1L3	Q7Z443	1732 aa		15.12	■□□□□ 0.01
SORBS3-222	ENST00000524057	ARFGEF1	Q9Y6D6	1849 aa		15.11	■□□□□ 0.01
SORBS3-222	ENST00000524057	GLTPD2	A6NH11	291 aa		15.11	■□□□□ 0.01
SORBS3-222	ENST00000524057	RPS6KA4	O75676	772 aa		15.11	■□□□□ 0.01
SORBS3-222	ENST00000524057	C4A	P0C0L4	1744 aa		15.11	■□□□□ 0.01
SORBS3-222	ENST00000524057	TNRC6C	Q9HCJ0	1690 aa	Known RBP	15.1	■□□□□ 0.01
SORBS3-222	ENST00000524057	POTEC	B2RU33	542 aa		15.09	■□□□□ 0.01
SORBS3-222	ENST00000524057	SBF1	O95248	1867 aa		15.08	■□□□□ 0.01
SORBS3-222	ENST00000524057	FOXN1	O15353	648 aa		15.08	■□□□□ 0
SORBS3-222	ENST00000524057	PHKG2	P15735	406 aa		15.08	■□□□□ 0
SORBS3-222	ENST00000524057	RASSF7	Q02833	373 aa		15.08	■□□□□ 0
SORBS3-222	ENST00000524057	DDR1	Q08345	913 aa		15.08	■□□□□ 0
SORBS3-222	ENST00000524057	IFNL2	Q8IZJ0	200 aa		15.08	■□□□□ 0
SORBS3-222	ENST00000524057	CCER1	Q8TC90	406 aa	Predicted RBP	15.08	■□□□□ 0
SORBS3-222	ENST00000524057	RBM42	Q9BTD8	480 aa	Known RBP	15.08	■□□□□ 0
SORBS3-222	ENST00000524057	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	15.08	■□□□□ 0
SORBS3-222	ENST00000524057	ZC3H4	Q9UPT8	1303 aa	Known RBP	15.08	■□□□□ 0
SORBS3-222	ENST00000524057	FLT4	P35916	1363 aa		15.08	■□□□□ 0
SORBS3-222	ENST00000524057	LMNB1	P20700	586 aa		15.07	■□□□□ 0
SORBS3-222	ENST00000524057	FKBP8	Q14318	412 aa		15.07	■□□□□ 0
SORBS3-222	ENST00000524057	PRDM10	Q9NQV6	1147 aa		15.07	■□□□□ 0
SORBS3-222	ENST00000524057	MKRN1	Q9UHC7	482 aa	Known RBP	15.07	■□□□□ 0
SORBS3-222	ENST00000524057	KDR	P35968	1356 aa		15.07	■□□□□ 0
SORBS3-222	ENST00000524057	TESK2	Q96S53	571 aa		15.06	■□□□□ 0
SORBS3-222	ENST00000524057	PCDH10	Q9P2E7	1040 aa		15.06	■□□□□ 0
SORBS3-222	ENST00000524057	SRP68	Q9UHB9	627 aa	Known RBP	15.06	■□□□□ 0
SORBS3-222	ENST00000524057	TIMELESS	Q9UNS1	1208 aa		15.06	■□□□□ 0
SORBS3-222	ENST00000524057	CNTNAP4	Q9C0A0	1308 aa		15.06	■□□□□ 0
SORBS3-222	ENST00000524057	KDM6A	O15550	1401 aa	Predicted RBP	15.06	■□□□□ 0
SORBS3-222	ENST00000524057	CREBZF	Q9NS37	354 aa		15.05	■□□□□ -0
SORBS3-222	ENST00000524057	EMILIN1	Q9Y6C2	1016 aa		15.05	■□□□□ -0
SORBS3-222	ENST00000524057	KIF24	Q5T7B8	1368 aa		15.05	■□□□□ -0
SORBS3-222	ENST00000524057	TM4SF1	P30408	202 aa		15.04	■□□□□ -0
SORBS3-222	ENST00000524057	EYA1	Q99502	592 aa		15.04	■□□□□ -0
SORBS3-222	ENST00000524057	NCAPD2	Q15021	1401 aa		15.03	■□□□□ -0
SORBS3-222	ENST00000524057	ST20-MTHFS	A0A0A6YYL1	179 aa		15.02	■□□□□ -0
SORBS3-222	ENST00000524057	ERVV-2	B6SEH9	535 aa		15.02	■□□□□ -0
SORBS3-222	ENST00000524057	POLRMT	O00411	1230 aa	Known RBP	15.02	■□□□□ -0
SORBS3-222	ENST00000524057	FAM161A	Q3B820	660 aa		15.02	■□□□□ -0
SORBS3-222	ENST00000524057	USP42	Q9H9J4	1324 aa	Known RBP	15.01	□□□□□ -0.01
SORBS3-222	ENST00000524057	PPM1G	O15355	546 aa	Predicted RBP	15.01	□□□□□ -0.01
SORBS3-222	ENST00000524057	CTCF	P49711	727 aa	Predicted RBP	15.01	□□□□□ -0.01
SORBS3-222	ENST00000524057	DPY19L2	Q6NUT2	758 aa		15.01	□□□□□ -0.01
SORBS3-222	ENST00000524057	CRKL	P46109	303 aa	Known RBP	15	□□□□□ -0.01
SORBS3-222	ENST00000524057	CHADL	Q6NUI6	762 aa		15	□□□□□ -0.01
SORBS3-222	ENST00000524057	WASHC2A	Q641Q2	1341 aa		14.99	□□□□□ -0.01
SORBS3-222	ENST00000524057	MYH14	Q7Z406	1995 aa	Known RBP	14.99	□□□□□ -0.01
SORBS3-222	ENST00000524057	POTEI	P0CG38	1075 aa		14.99	□□□□□ -0.01
SORBS3-222	ENST00000524057	POTEJ	P0CG39	1038 aa		14.99	□□□□□ -0.01
SORBS3-222	ENST00000524057	ABHD8	Q96I13	439 aa		14.99	□□□□□ -0.01
SORBS3-222	ENST00000524057	ZNF831	Q5JPB2	1677 aa		14.98	□□□□□ -0.01
SORBS3-222	ENST00000524057	NFKBIE	O00221	500 aa		14.98	□□□□□ -0.01
SORBS3-222	ENST00000524057	PTCD1	O75127	700 aa	Known RBP	14.98	□□□□□ -0.01
SORBS3-222	ENST00000524057	LBX1	P52954	281 aa		14.98	□□□□□ -0.01
SORBS3-222	ENST00000524057	TTLL6	Q8N841	843 aa		14.98	□□□□□ -0.01
SORBS3-222	ENST00000524057	CNTNAP1	P78357	1384 aa		14.98	□□□□□ -0.01
SORBS3-222	ENST00000524057	COL5A3	P25940	1745 aa	Predicted RBP	14.97	□□□□□ -0.01
SORBS3-222	ENST00000524057	SLC24A1	O60721	1099 aa		14.97	□□□□□ -0.01

Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms