RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 RBM42Q9BTD8 480 aaKnown RBP35.75■■■■□ 3.31
PVT1-219ENST00000523427 ANKRD26Q9UPS8 1709 aa35.74■■■■□ 3.31
PVT1-219ENST00000523427 CEP350Q5VT06 3117 aa35.72■■■■□ 3.31
PVT1-219ENST00000523427 ADCY9O60503 1353 aa35.72■■■■□ 3.31
PVT1-219ENST00000523427 TRAPPC3LQ5T215 181 aa35.71■■■■□ 3.31
PVT1-219ENST00000523427 RTCBQ9Y3I0 505 aaKnown RBP35.71■■■■□ 3.31
PVT1-219ENST00000523427 SLC4A9Q96Q91 983 aa35.68■■■■□ 3.3
PVT1-219ENST00000523427 PLEKHO1Q53GL0 409 aaPredicted RBP35.65■■■■□ 3.3
PVT1-219ENST00000523427 PCGF6Q9BYE7 350 aa35.65■■■■□ 3.3
PVT1-219ENST00000523427 BCS1LQ9Y276 419 aa35.65■■■■□ 3.3
PVT1-219ENST00000523427 A0A0G2JLW4 131 aa35.64■■■■□ 3.3
PVT1-219ENST00000523427 ERVV-2B6SEH9 535 aa35.64■■■■□ 3.3
PVT1-219ENST00000523427 ZNF530Q6P9A1 599 aaPredicted RBP35.64■■■■□ 3.3
PVT1-219ENST00000523427 TIMELESSQ9UNS1 1208 aa35.64■■■■□ 3.3
PVT1-219ENST00000523427 HSPA6P17066 643 aa35.63■■■■□ 3.29
PVT1-219ENST00000523427 CABP4P57796 275 aa35.63■■■■□ 3.29
PVT1-219ENST00000523427 NLGN1Q8N2Q7 840 aa35.63■■■■□ 3.29
PVT1-219ENST00000523427 ARHGEF1Q92888 912 aaKnown RBP35.63■■■■□ 3.29
PVT1-219ENST00000523427 DCAF5Q96JK2 942 aa35.63■■■■□ 3.29
PVT1-219ENST00000523427 PANK3Q9H999 370 aa35.63■■■■□ 3.29
PVT1-219ENST00000523427 HSP90AB1P08238 724 aaKnown RBP35.62■■■■□ 3.29
PVT1-219ENST00000523427 KDRP35968 1356 aa35.62■■■■□ 3.29
PVT1-219ENST00000523427 RFC4P35249 363 aa35.6■■■■□ 3.29
PVT1-219ENST00000523427 PXDNLA1KZ92 1463 aa35.6■■■■□ 3.29
PVT1-219ENST00000523427 CICQ96RK0 1608 aaPredicted RBP35.58■■■■□ 3.29
PVT1-219ENST00000523427 PTCD1O75127 700 aaKnown RBP35.58■■■■□ 3.29
PVT1-219ENST00000523427 ARHGAP27Q6ZUM4 889 aa35.58■■■■□ 3.29
PVT1-219ENST00000523427 TGFB2P61812 414 aa35.57■■■■□ 3.28
PVT1-219ENST00000523427 AEBP1Q8IUX7 1158 aa35.57■■■■□ 3.28
PVT1-219ENST00000523427 KIF3CO14782 793 aa35.56■■■■□ 3.28
PVT1-219ENST00000523427 RPS6KA4O75676 772 aa35.56■■■■□ 3.28
PVT1-219ENST00000523427 DPEP1P16444 411 aa35.56■■■■□ 3.28
PVT1-219ENST00000523427 MTHFSP49914 203 aa35.56■■■■□ 3.28
PVT1-219ENST00000523427 RC3H1Q5TC82 1133 aaKnown RBP35.56■■■■□ 3.28
PVT1-219ENST00000523427 IFFO2Q5TF58 517 aa35.56■■■■□ 3.28
PVT1-219ENST00000523427 CCDC87Q9NVE4 849 aa35.56■■■■□ 3.28
PVT1-219ENST00000523427 GYS1P13807 737 aa35.55■■■■□ 3.28
PVT1-219ENST00000523427 PARP3Q9Y6F1 533 aa35.55■■■■□ 3.28
PVT1-219ENST00000523427 HSPA5P11021 654 aaKnown RBP35.54■■■■□ 3.28
PVT1-219ENST00000523427 ADRA2BP18089 450 aa35.54■■■■□ 3.28
PVT1-219ENST00000523427 AMOTQ4VCS5 1084 aa35.54■■■■□ 3.28
PVT1-219ENST00000523427 C1orf141Q5JVX7 400 aa35.54■■■■□ 3.28
PVT1-219ENST00000523427 MORC1Q86VD1 984 aa35.54■■■■□ 3.28
PVT1-219ENST00000523427 KDM6AO15550 1401 aaPredicted RBP35.54■■■■□ 3.28
PVT1-219ENST00000523427 CNTNAP4Q9C0A0 1308 aa35.54■■■■□ 3.28
PVT1-219ENST00000523427 N4BP2Q86UW6 1770 aaPredicted RBP35.53■■■■□ 3.28
PVT1-219ENST00000523427 FCHSD2O94868 740 aa35.53■■■■□ 3.28
PVT1-219ENST00000523427 EIF4G2P78344 907 aaKnown RBP eCLIP35.52■■■■□ 3.283e-6■■■■■ 29.6
PVT1-219ENST00000523427 NFATC2IPQ8NCF5 419 aa35.51■■■■□ 3.28
PVT1-219ENST00000523427 C10orf71Q711Q0 1435 aa35.5■■■■□ 3.27
PVT1-219ENST00000523427 PLEKHG2Q9H7P9 1386 aa35.5■■■■□ 3.27
PVT1-219ENST00000523427 SULT6B1Q6IMI4 303 aa35.49■■■■□ 3.27
PVT1-219ENST00000523427 SRP68Q9UHB9 627 aaKnown RBP35.49■■■■□ 3.27
PVT1-219ENST00000523427 CRKLP46109 303 aaKnown RBP35.47■■■■□ 3.27
PVT1-219ENST00000523427 KIAA1551Q9HCM1 1747 aa35.45■■■■□ 3.27
PVT1-219ENST00000523427 KIF13BQ9NQT8 1826 aa35.45■■■■□ 3.27
PVT1-219ENST00000523427 C4AP0C0L4 1744 aa35.44■■■■□ 3.26
PVT1-219ENST00000523427 COL5A3P25940 1745 aaPredicted RBP35.43■■■■□ 3.26
PVT1-219ENST00000523427 MYH14Q7Z406 1995 aaKnown RBP35.42■■■■□ 3.26
PVT1-219ENST00000523427 FKBP8Q14318 412 aa35.42■■■■□ 3.26
PVT1-219ENST00000523427 NMRK2Q9NPI5 230 aa35.42■■■■□ 3.26
PVT1-219ENST00000523427 ZNF831Q5JPB2 1677 aa35.41■■■■□ 3.26
PVT1-219ENST00000523427 CLSPNQ9HAW4 1339 aa35.4■■■■□ 3.26
PVT1-219ENST00000523427 KCNA3P22001 575 aa35.4■■■■□ 3.26
PVT1-219ENST00000523427 KNSTRNQ9Y448 316 aa35.39■■■■□ 3.26
PVT1-219ENST00000523427 DDR1Q08345 913 aa35.38■■■■□ 3.25
PVT1-219ENST00000523427 C9orf131Q5VYM1 1079 aa35.38■■■■□ 3.25
PVT1-219ENST00000523427 PIM2Q9P1W9 311 aa35.38■■■■□ 3.25
PVT1-219ENST00000523427 TOMM70O94826 608 aa35.37■■■■□ 3.25
PVT1-219ENST00000523427 USP42Q9H9J4 1324 aaKnown RBP35.36■■■■□ 3.25
PVT1-219ENST00000523427 IL13P35225 146 aa35.36■■■■□ 3.25
PVT1-219ENST00000523427 CHRNA5P30532 468 aa35.35■■■■□ 3.25
PVT1-219ENST00000523427 DALRD3Q5D0E6 543 aaKnown RBP35.35■■■■□ 3.25
PVT1-219ENST00000523427 APLP1P51693 650 aa35.34■■■■□ 3.25
PVT1-219ENST00000523427 INTS5Q6P9B9 1019 aaKnown RBP35.34■■■■□ 3.25
PVT1-219ENST00000523427 DNAJC10Q8IXB1 793 aa35.34■■■■□ 3.25
PVT1-219ENST00000523427 LGR6Q9HBX8 967 aa35.32■■■■□ 3.24
PVT1-219ENST00000523427 ZPR1O75312 459 aa35.3■■■■□ 3.24
PVT1-219ENST00000523427 HMOX1P09601 288 aa35.3■■■■□ 3.24
PVT1-219ENST00000523427 SLC39A6Q13433 755 aa35.3■■■■□ 3.24
PVT1-219ENST00000523427 AKAP4Q5JQC9 854 aa35.3■■■■□ 3.24
PVT1-219ENST00000523427 USPL1Q5W0Q7 1092 aa35.3■■■■□ 3.24
PVT1-219ENST00000523427 C16orf71Q8IYS4 520 aaPredicted RBP35.29■■■■□ 3.24
PVT1-219ENST00000523427 RNF181Q9P0P0 153 aa35.29■■■■□ 3.24
PVT1-219ENST00000523427 SLC52A2Q9HAB3 445 aa35.28■■■■□ 3.24
PVT1-219ENST00000523427 TJP1Q07157 1748 aa35.27■■■■□ 3.24
PVT1-219ENST00000523427 BRCA1P38398 1863 aaKnown RBP35.26■■■■□ 3.24
PVT1-219ENST00000523427 POLRMTO00411 1230 aaKnown RBP35.26■■■■□ 3.24
PVT1-219ENST00000523427 TM4SF1P30408 202 aa35.25■■■■□ 3.23
PVT1-219ENST00000523427 RNMTO43148 476 aaKnown RBP35.23■■■■□ 3.23
PVT1-219ENST00000523427 SOS1Q07889 1333 aaPredicted RBP35.22■■■■□ 3.23
PVT1-219ENST00000523427 SCN11AQ9UI33 1791 aa35.22■■■■□ 3.23
PVT1-219ENST00000523427 CYP19A1P11511 503 aaPredicted RBP35.21■■■■□ 3.23
PVT1-219ENST00000523427 AMER1Q5JTC6 1135 aaPredicted RBP35.21■■■■□ 3.23
PVT1-219ENST00000523427 DNAJC5GQ8N7S2 189 aa35.21■■■■□ 3.23
PVT1-219ENST00000523427 CCER1Q8TC90 406 aaPredicted RBP35.21■■■■□ 3.23
PVT1-219ENST00000523427 HTRA3P83110 453 aa35.2■■■■□ 3.23
PVT1-219ENST00000523427 RRAGCQ9HB90 399 aa35.2■■■■□ 3.23
PVT1-219ENST00000523427 KDM2BQ8NHM5 1336 aa35.2■■■■□ 3.23
PVT1-219ENST00000523427 KCPQ6ZWJ8 1503 aa35.2■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms