RNA–Protein interactions for RNA: ENST00000520513.1

LINC00535-204, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 305 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-204ENST00000520513 FLIIQ13045 1269 aa10.23□□□□□ -0.77
LINC00535-204ENST00000520513 CLUAP1Q96AJ1 413 aa10.23□□□□□ -0.77
LINC00535-204ENST00000520513 PCDHGA11Q9Y5H2 935 aa10.23□□□□□ -0.77
LINC00535-204ENST00000520513 INHAP05111 366 aa10.22□□□□□ -0.77
LINC00535-204ENST00000520513 GDF10P55107 478 aa10.22□□□□□ -0.77
LINC00535-204ENST00000520513 GTPBP3Q969Y2 492 aaKnown RBP10.22□□□□□ -0.77
LINC00535-204ENST00000520513 SKIP12755 728 aa10.21□□□□□ -0.77
LINC00535-204ENST00000520513 ZNF295-AS1Q8N0V1 137 aa10.21□□□□□ -0.77
LINC00535-204ENST00000520513 UCN2Q96RP3 112 aa10.21□□□□□ -0.77
LINC00535-204ENST00000520513 GPAMQ9HCL2 828 aa10.21□□□□□ -0.77
LINC00535-204ENST00000520513 USP3Q9Y6I4 520 aa10.21□□□□□ -0.77
LINC00535-204ENST00000520513 ADAMTS2O95450 1211 aa10.2□□□□□ -0.78
LINC00535-204ENST00000520513 F11P03951 625 aa10.2□□□□□ -0.78
LINC00535-204ENST00000520513 UBAP2LQ14157 1087 aaKnown RBP10.2□□□□□ -0.78
LINC00535-204ENST00000520513 TLR1Q15399 786 aa10.2□□□□□ -0.78
LINC00535-204ENST00000520513 ESCO1Q5FWF5 840 aa10.2□□□□□ -0.78
LINC00535-204ENST00000520513 PPARGC1BQ86YN6 1023 aaKnown RBP10.2□□□□□ -0.78
LINC00535-204ENST00000520513 DEPDC4Q8N2C3 294 aa10.2□□□□□ -0.78
LINC00535-204ENST00000520513 H7C1W4 665 aa10.19□□□□□ -0.78
LINC00535-204ENST00000520513 RAD21O60216 631 aa10.19□□□□□ -0.78
LINC00535-204ENST00000520513 GSK3AP49840 483 aa10.19□□□□□ -0.78
LINC00535-204ENST00000520513 TMEM214Q6NUQ4 689 aaKnown RBP10.19□□□□□ -0.78
LINC00535-204ENST00000520513 FNBP4Q8N3X1 1017 aaPredicted RBP10.19□□□□□ -0.78
LINC00535-204ENST00000520513 SIRT1Q96EB6 747 aa10.19□□□□□ -0.78
LINC00535-204ENST00000520513 ARHGEF15O94989 841 aa10.18□□□□□ -0.78
LINC00535-204ENST00000520513 NCOA4Q13772 614 aa10.18□□□□□ -0.78
LINC00535-204ENST00000520513 LYPD4Q6UWN0 246 aa10.18□□□□□ -0.78
LINC00535-204ENST00000520513 SERTAD1Q9UHV2 236 aa10.18□□□□□ -0.78
LINC00535-204ENST00000520513 SRSF11Q05519 484 aaKnown RBP10.17□□□□□ -0.78
LINC00535-204ENST00000520513 FOXR1Q6PIV2 292 aa10.17□□□□□ -0.78
LINC00535-204ENST00000520513 SVOPQ8N4V2 548 aa10.17□□□□□ -0.78
LINC00535-204ENST00000520513 RHBDD1Q8TEB9 315 aa10.17□□□□□ -0.78
LINC00535-204ENST00000520513 NUCKS1Q9H1E3 243 aaKnown RBP10.17□□□□□ -0.78
LINC00535-204ENST00000520513 ADAMTS8Q9UP79 889 aa10.17□□□□□ -0.78
LINC00535-204ENST00000520513 MSX1P28360 303 aa10.16□□□□□ -0.78
LINC00535-204ENST00000520513 HDGFL1Q5TGJ6 251 aa10.16□□□□□ -0.78
LINC00535-204ENST00000520513 TBC1D9Q6ZT07 1266 aa10.16□□□□□ -0.78
LINC00535-204ENST00000520513 NFATC2IPQ8NCF5 419 aa10.16□□□□□ -0.78
LINC00535-204ENST00000520513 RUBCNLQ9H714 662 aa10.16□□□□□ -0.78
LINC00535-204ENST00000520513 IQSEC3Q9UPP2 1182 aaPredicted RBP10.16□□□□□ -0.78
LINC00535-204ENST00000520513 A0A1B0GTH6 734 aa10.15□□□□□ -0.78
LINC00535-204ENST00000520513 USP17L5A8MUK1 530 aa10.15□□□□□ -0.78
LINC00535-204ENST00000520513 SMTNP53814 917 aa10.15□□□□□ -0.78
LINC00535-204ENST00000520513 GNASQ5JWF2 1037 aa10.15□□□□□ -0.78
LINC00535-204ENST00000520513 SLC4A9Q96Q91 983 aa10.15□□□□□ -0.78
LINC00535-204ENST00000520513 MBIPQ9NS73 344 aa10.15□□□□□ -0.78
LINC00535-204ENST00000520513 RNF225M0QZC1 329 aaPredicted RBP10.14□□□□□ -0.79
LINC00535-204ENST00000520513 GTF2E1P29083 439 aaPredicted RBP10.14□□□□□ -0.79
LINC00535-204ENST00000520513 PLA2G4AP47712 749 aa10.14□□□□□ -0.79
LINC00535-204ENST00000520513 GTF2IP78347 998 aa10.14□□□□□ -0.79
LINC00535-204ENST00000520513 KCNMA1Q12791 1236 aa10.14□□□□□ -0.79
LINC00535-204ENST00000520513 EML3Q32P44 896 aa10.14□□□□□ -0.79
LINC00535-204ENST00000520513 KIAA1024Q9UPX6 916 aa10.14□□□□□ -0.79
LINC00535-204ENST00000520513 IGF1RP08069 1367 aa10.14□□□□□ -0.79
LINC00535-204ENST00000520513 ATP4AP20648 1035 aa10.13□□□□□ -0.79
LINC00535-204ENST00000520513 MTFR1Q15390 333 aa10.13□□□□□ -0.79
LINC00535-204ENST00000520513 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.13□□□□□ -0.79
LINC00535-204ENST00000520513 TRERF1Q96PN7 1200 aa10.13□□□□□ -0.79
LINC00535-204ENST00000520513 HCN2Q9UL51 889 aa10.13□□□□□ -0.79
LINC00535-204ENST00000520513 CELA2BP08218 269 aaPredicted RBP10.12□□□□□ -0.79
LINC00535-204ENST00000520513 WWC1Q8IX03 1113 aa10.12□□□□□ -0.79
LINC00535-204ENST00000520513 NOD1Q9Y239 953 aa10.12□□□□□ -0.79
LINC00535-204ENST00000520513 A6NJY4 79 aa10.11□□□□□ -0.79
LINC00535-204ENST00000520513 ZBTB7BO15156 539 aaPredicted RBP10.11□□□□□ -0.79
LINC00535-204ENST00000520513 ACDQ96AP0 544 aa10.11□□□□□ -0.79
LINC00535-204ENST00000520513 ZMYND15Q9H091 742 aa10.11□□□□□ -0.79
LINC00535-204ENST00000520513 DNAAF2Q9NVR5 837 aaKnown RBP10.11□□□□□ -0.79
LINC00535-204ENST00000520513 ZNF358Q9NW07 568 aa10.11□□□□□ -0.79
LINC00535-204ENST00000520513 USP17L3A6NCW0 530 aa10.1□□□□□ -0.79
LINC00535-204ENST00000520513 USP17L4A6NCW7 530 aa10.1□□□□□ -0.79
LINC00535-204ENST00000520513 CLDN10P78369 228 aa10.1□□□□□ -0.79
LINC00535-204ENST00000520513 USP17L2Q6R6M4 530 aa10.1□□□□□ -0.79
LINC00535-204ENST00000520513 USP17L1Q7RTZ2 530 aa10.1□□□□□ -0.79
LINC00535-204ENST00000520513 PROSER2Q86WR7 435 aaPredicted RBP10.1□□□□□ -0.79
LINC00535-204ENST00000520513 EPHA4P54764 986 aa10.09□□□□□ -0.79
LINC00535-204ENST00000520513 MAP3K10Q02779 954 aa10.09□□□□□ -0.79
LINC00535-204ENST00000520513 LBRQ14739 615 aaKnown RBP10.09□□□□□ -0.79
LINC00535-204ENST00000520513 NDFIP2Q9NV92 336 aa10.09□□□□□ -0.79
LINC00535-204ENST00000520513 CDK2AP1O14519 115 aa10.08□□□□□ -0.8
LINC00535-204ENST00000520513 ATP9BO43861 1147 aa10.08□□□□□ -0.8
LINC00535-204ENST00000520513 LZTS3O60299 673 aaPredicted RBP10.08□□□□□ -0.8
LINC00535-204ENST00000520513 PLEKHM2Q8IWE5 1019 aa10.08□□□□□ -0.8
LINC00535-204ENST00000520513 ZDHHC1Q8WTX9 485 aa10.08□□□□□ -0.8
LINC00535-204ENST00000520513 GLMNQ92990 594 aa10.08□□□□□ -0.8
LINC00535-204ENST00000520513 NIFKQ9BYG3 293 aaKnown RBP10.08□□□□□ -0.8
LINC00535-204ENST00000520513 CRISPLD1Q9H336 500 aa10.08□□□□□ -0.8
LINC00535-204ENST00000520513 PARP3Q9Y6F1 533 aa10.08□□□□□ -0.8
LINC00535-204ENST00000520513 BNIP3LO60238 219 aa10.07□□□□□ -0.8
LINC00535-204ENST00000520513 MX2P20592 715 aa10.07□□□□□ -0.8
LINC00535-204ENST00000520513 FOXK2Q01167 660 aa10.07□□□□□ -0.8
LINC00535-204ENST00000520513 KLRG1Q96E93 195 aa10.07□□□□□ -0.8
LINC00535-204ENST00000520513 ABHD17AQ96GS6 310 aa10.07□□□□□ -0.8
LINC00535-204ENST00000520513 SCHIP1Q9P0W5 487 aaPredicted RBP10.07□□□□□ -0.8
LINC00535-204ENST00000520513 C2CD2LO14523 706 aa10.06□□□□□ -0.8
LINC00535-204ENST00000520513 DKK1O94907 266 aa10.06□□□□□ -0.8
LINC00535-204ENST00000520513 TBCELQ5QJ74 424 aa10.06□□□□□ -0.8
LINC00535-204ENST00000520513 TNS4Q8IZW8 715 aa10.06□□□□□ -0.8
LINC00535-204ENST00000520513 CFHR5Q9BXR6 569 aa10.06□□□□□ -0.8
LINC00535-204ENST00000520513 NSFL1CQ9UNZ2 370 aaKnown RBP10.06□□□□□ -0.8
LINC00535-204ENST00000520513 PSME1Q06323 249 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms