RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 PPP1R15BQ5SWA1 713 aa12.96□□□□□ -0.33
CTNNA1-221ENST00000520339 LTV1Q96GA3 475 aaPredicted RBP12.96□□□□□ -0.33
CTNNA1-221ENST00000520339 ACSBG1Q96GR2 724 aa12.96□□□□□ -0.33
CTNNA1-221ENST00000520339 SPON1Q9HCB6 807 aa12.96□□□□□ -0.33
CTNNA1-221ENST00000520339 TIMELESSQ9UNS1 1208 aa12.96□□□□□ -0.33
CTNNA1-221ENST00000520339 MON2Q7Z3U7 1717 aa12.96□□□□□ -0.34
CTNNA1-221ENST00000520339 HOXC9P31274 260 aa12.95□□□□□ -0.34
CTNNA1-221ENST00000520339 AMPHP49418 695 aa12.95□□□□□ -0.34
CTNNA1-221ENST00000520339 CDCA8Q53HL2 280 aa12.94□□□□□ -0.34
CTNNA1-221ENST00000520339 MICALL2Q8IY33 904 aa12.94□□□□□ -0.34
CTNNA1-221ENST00000520339 PDCD7Q8N8D1 485 aaKnown RBP12.94□□□□□ -0.34
CTNNA1-221ENST00000520339 PDGFDQ9GZP0 370 aaPredicted RBP12.93□□□□□ -0.34
CTNNA1-221ENST00000520339 GGNBP2Q9H3C7 697 aa12.93□□□□□ -0.34
CTNNA1-221ENST00000520339 ARIH1Q9Y4X5 557 aaPredicted RBP12.93□□□□□ -0.34
CTNNA1-221ENST00000520339 RRS1Q15050 365 aaKnown RBP12.92□□□□□ -0.34
CTNNA1-221ENST00000520339 SLC15A2Q16348 729 aa12.92□□□□□ -0.34
CTNNA1-221ENST00000520339 ASTLQ6HA08 431 aaPredicted RBP12.92□□□□□ -0.34
CTNNA1-221ENST00000520339 DDX54Q8TDD1 881 aaKnown RBP12.92□□□□□ -0.34
CTNNA1-221ENST00000520339 CARD14Q9BXL6 1004 aa12.92□□□□□ -0.34
CTNNA1-221ENST00000520339 OCEL1Q9H607 264 aa12.92□□□□□ -0.34
CTNNA1-221ENST00000520339 STK32BQ9NY57 414 aa12.92□□□□□ -0.34
CTNNA1-221ENST00000520339 USP54Q70EL1 1684 aa12.92□□□□□ -0.34
CTNNA1-221ENST00000520339 CLSPNQ9HAW4 1339 aa12.91□□□□□ -0.34
CTNNA1-221ENST00000520339 IRX5P78411 483 aaPredicted RBP12.91□□□□□ -0.34
CTNNA1-221ENST00000520339 SMYD5Q6GMV2 418 aa12.91□□□□□ -0.34
CTNNA1-221ENST00000520339 RREB1Q92766 1687 aa12.91□□□□□ -0.34
CTNNA1-221ENST00000520339 NBPF6Q5VWK0 638 aa12.9□□□□□ -0.34
CTNNA1-221ENST00000520339 TMC2Q8TDI7 906 aa12.9□□□□□ -0.34
CTNNA1-221ENST00000520339 NBPF4Q96M43 638 aa12.9□□□□□ -0.34
CTNNA1-221ENST00000520339 PCGF6Q9BYE7 350 aa12.9□□□□□ -0.34
CTNNA1-221ENST00000520339 PPP1R1BQ9UD71 204 aaPredicted RBP12.9□□□□□ -0.34
CTNNA1-221ENST00000520339 NUP188Q5SRE5 1749 aa12.89□□□□□ -0.35
CTNNA1-221ENST00000520339 G3V3G9 751 aa12.89□□□□□ -0.35
CTNNA1-221ENST00000520339 ZBTB7AO95365 584 aa12.89□□□□□ -0.35
CTNNA1-221ENST00000520339 PTGER2P43116 358 aa12.89□□□□□ -0.35
CTNNA1-221ENST00000520339 DSG2Q14126 1118 aa12.89□□□□□ -0.35
CTNNA1-221ENST00000520339 IER5LQ5T953 404 aa12.89□□□□□ -0.35
CTNNA1-221ENST00000520339 ZCRB1Q8TBF4 217 aaKnown RBP12.89□□□□□ -0.35
CTNNA1-221ENST00000520339 ZC3H15Q8WU90 426 aaKnown RBP12.89□□□□□ -0.35
CTNNA1-221ENST00000520339 PRIM1P49642 420 aaKnown RBP12.88□□□□□ -0.35
CTNNA1-221ENST00000520339 HSP90AB2PQ58FF8 381 aa12.88□□□□□ -0.35
CTNNA1-221ENST00000520339 LRRC4BQ9NT99 713 aa12.88□□□□□ -0.35
CTNNA1-221ENST00000520339 BOLA1Q9Y3E2 137 aa12.88□□□□□ -0.35
CTNNA1-221ENST00000520339 RTL1A6NKG5 1358 aa12.88□□□□□ -0.35
CTNNA1-221ENST00000520339 RGPD5Q99666 1765 aa12.87□□□□□ -0.35
CTNNA1-221ENST00000520339 INSRP06213 1382 aa12.86□□□□□ -0.35
CTNNA1-221ENST00000520339 SLC27A3Q5K4L6 730 aa12.86□□□□□ -0.35
CTNNA1-221ENST00000520339 CGNL1Q0VF96 1302 aa12.86□□□□□ -0.35
CTNNA1-221ENST00000520339 PLCG2P16885 1265 aa12.85□□□□□ -0.35
CTNNA1-221ENST00000520339 ZNF827Q17R98 1081 aa12.85□□□□□ -0.35
CTNNA1-221ENST00000520339 USHBP1Q8N6Y0 703 aa12.85□□□□□ -0.35
CTNNA1-221ENST00000520339 MTFR1LQ9H019 292 aa12.85□□□□□ -0.35
CTNNA1-221ENST00000520339 RGPD3A6NKT7 1758 aaPredicted RBP12.84□□□□□ -0.35
CTNNA1-221ENST00000520339 RGPD4Q7Z3J3 1758 aa12.84□□□□□ -0.35
CTNNA1-221ENST00000520339 KIF24Q5T7B8 1368 aa12.84□□□□□ -0.35
CTNNA1-221ENST00000520339 MEGF6O75095 1541 aa12.84□□□□□ -0.35
CTNNA1-221ENST00000520339 SBF2Q86WG5 1849 aa12.84□□□□□ -0.35
CTNNA1-221ENST00000520339 GABBR2O75899 941 aa12.84□□□□□ -0.35
CTNNA1-221ENST00000520339 RAPGEF4Q8WZA2 1011 aa12.84□□□□□ -0.35
CTNNA1-221ENST00000520339 TMEM121BQ9BXQ6 578 aaPredicted RBP12.84□□□□□ -0.35
CTNNA1-221ENST00000520339 EMILIN3Q9NT22 766 aa12.84□□□□□ -0.35
CTNNA1-221ENST00000520339 EMILIN1Q9Y6C2 1016 aa12.84□□□□□ -0.35
CTNNA1-221ENST00000520339 NSD3Q9BZ95 1437 aa12.84□□□□□ -0.35
CTNNA1-221ENST00000520339 WNK3Q9BYP7 1800 aa12.83□□□□□ -0.35
CTNNA1-221ENST00000520339 DPYSL4O14531 572 aa12.83□□□□□ -0.36
CTNNA1-221ENST00000520339 TATP17735 454 aaPredicted RBP12.83□□□□□ -0.36
CTNNA1-221ENST00000520339 FOXK1P85037 733 aa12.83□□□□□ -0.36
CTNNA1-221ENST00000520339 SYTL4Q96C24 671 aaPredicted RBP12.83□□□□□ -0.36
CTNNA1-221ENST00000520339 NSD2O96028 1365 aa12.82□□□□□ -0.36
CTNNA1-221ENST00000520339 FLT4P35916 1363 aa12.82□□□□□ -0.36
CTNNA1-221ENST00000520339 KCNQ4P56696 695 aa12.82□□□□□ -0.36
CTNNA1-221ENST00000520339 SMG6Q86US8 1419 aaKnown RBP12.81□□□□□ -0.36
CTNNA1-221ENST00000520339 C2orf72A6NCS6 295 aa12.81□□□□□ -0.36
CTNNA1-221ENST00000520339 MLLT3P42568 568 aaPredicted RBP12.81□□□□□ -0.36
CTNNA1-221ENST00000520339 NHSQ6T4R5 1651 aa12.8□□□□□ -0.36
CTNNA1-221ENST00000520339 LTN1O94822 1766 aa12.8□□□□□ -0.36
CTNNA1-221ENST00000520339 CYP27B1O15528 508 aa12.8□□□□□ -0.36
CTNNA1-221ENST00000520339 HSPA5P11021 654 aaKnown RBP12.8□□□□□ -0.36
CTNNA1-221ENST00000520339 EIF4G2P78344 907 aaKnown RBP eCLIP12.8□□□□□ -0.36
CTNNA1-221ENST00000520339 PLPP6Q8IY26 295 aa12.8□□□□□ -0.36
CTNNA1-221ENST00000520339 SLC16A10Q8TF71 515 aa12.8□□□□□ -0.36
CTNNA1-221ENST00000520339 DCBLD2Q96PD2 775 aa12.8□□□□□ -0.36
CTNNA1-221ENST00000520339 SYT17Q9BSW7 474 aa12.8□□□□□ -0.36
CTNNA1-221ENST00000520339 FHDC1Q9C0D6 1143 aaPredicted RBP12.8□□□□□ -0.36
CTNNA1-221ENST00000520339 POLKQ9UBT6 870 aa12.8□□□□□ -0.36
CTNNA1-221ENST00000520339 WASHC2AQ641Q2 1341 aa12.8□□□□□ -0.36
CTNNA1-221ENST00000520339 PPM1GO15355 546 aaPredicted RBP12.79□□□□□ -0.36
CTNNA1-221ENST00000520339 SEC24BO95487 1268 aa12.79□□□□□ -0.36
CTNNA1-221ENST00000520339 YY1P25490 414 aa12.79□□□□□ -0.36
CTNNA1-221ENST00000520339 L3MBTL3Q96JM7 780 aaPredicted RBP12.79□□□□□ -0.36
CTNNA1-221ENST00000520339 ARXQ96QS3 562 aa12.79□□□□□ -0.36
CTNNA1-221ENST00000520339 POLR3GLQ9BT43 218 aa12.79□□□□□ -0.36
CTNNA1-221ENST00000520339 CASZ1Q86V15 1759 aa12.79□□□□□ -0.36
CTNNA1-221ENST00000520339 EYA1Q99502 592 aa12.78□□□□□ -0.36
CTNNA1-221ENST00000520339 TFCP2L1Q9NZI6 479 aa12.78□□□□□ -0.36
CTNNA1-221ENST00000520339 CCNL1Q9UK58 526 aaPredicted RBP12.78□□□□□ -0.36
CTNNA1-221ENST00000520339 PNPLA7Q6ZV29 1317 aa12.78□□□□□ -0.36
CTNNA1-221ENST00000520339 PCDH11XQ9BZA7 1347 aa12.78□□□□□ -0.36
CTNNA1-221ENST00000520339 PCDH11YQ9BZA8 1340 aa12.78□□□□□ -0.36
CTNNA1-221ENST00000520339 FAM208AQ9UK61 1670 aaKnown RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms