RNA–Protein interactions for RNA: ENST00000520109.1

TNFRSF10B-206, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 2

Gene TNFRSF10B, Length 674 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-206ENST00000520109 PHF14O94880 888 aa25.93■■□□□ 1.74
TNFRSF10B-206ENST00000520109 ATG3Q9NT62 314 aa25.93■■□□□ 1.74
TNFRSF10B-206ENST00000520109 CD2APQ9Y5K6 639 aa25.92■■□□□ 1.74
TNFRSF10B-206ENST00000520109 GNPATO15228 680 aa25.91■■□□□ 1.74
TNFRSF10B-206ENST00000520109 PER1O15534 1290 aaPredicted RBP25.91■■□□□ 1.74
TNFRSF10B-206ENST00000520109 MSL1Q68DK7 614 aa25.91■■□□□ 1.74
TNFRSF10B-206ENST00000520109 RBM42Q9BTD8 480 aaKnown RBP25.91■■□□□ 1.74
TNFRSF10B-206ENST00000520109 GRIN3BO60391 1043 aa25.9■■□□□ 1.74
TNFRSF10B-206ENST00000520109 DIAPH1O60610 1272 aaKnown RBP25.9■■□□□ 1.74
TNFRSF10B-206ENST00000520109 CC2D1BQ5T0F9 858 aaKnown RBP25.9■■□□□ 1.74
TNFRSF10B-206ENST00000520109 AEBP1Q8IUX7 1158 aa25.9■■□□□ 1.74
TNFRSF10B-206ENST00000520109 PELP1Q8IZL8 1130 aaKnown RBP25.9■■□□□ 1.74
TNFRSF10B-206ENST00000520109 AKAP4Q5JQC9 854 aa25.89■■□□□ 1.74
TNFRSF10B-206ENST00000520109 LINC00116Q8NCU8 138 aa25.89■■□□□ 1.74
TNFRSF10B-206ENST00000520109 RTCBQ9Y3I0 505 aaKnown RBP25.89■■□□□ 1.74
TNFRSF10B-206ENST00000520109 ZNF831Q5JPB2 1677 aa25.88■■□□□ 1.73
TNFRSF10B-206ENST00000520109 ADRA2BP18089 450 aa25.88■■□□□ 1.73
TNFRSF10B-206ENST00000520109 RC3H1Q5TC82 1133 aaKnown RBP25.87■■□□□ 1.73
TNFRSF10B-206ENST00000520109 TRAPPC3LQ5T215 181 aa25.86■■□□□ 1.73
TNFRSF10B-206ENST00000520109 KDM6AO15550 1401 aaPredicted RBP25.86■■□□□ 1.73
TNFRSF10B-206ENST00000520109 ITPK1Q13572 414 aa25.85■■□□□ 1.73
TNFRSF10B-206ENST00000520109 UBR3Q6ZT12 1888 aa25.85■■□□□ 1.73
TNFRSF10B-206ENST00000520109 CNTNAP4Q9C0A0 1308 aa25.84■■□□□ 1.73
TNFRSF10B-206ENST00000520109 NFATC2IPQ8NCF5 419 aa25.83■■□□□ 1.73
TNFRSF10B-206ENST00000520109 CFAP53Q96M91 514 aa25.83■■□□□ 1.73
TNFRSF10B-206ENST00000520109 NLGN1Q8N2Q7 840 aa25.82■■□□□ 1.72
TNFRSF10B-206ENST00000520109 NLGN2Q8NFZ4 835 aa25.82■■□□□ 1.72
TNFRSF10B-206ENST00000520109 CHD4Q14839 1912 aa25.8■■□□□ 1.72
TNFRSF10B-206ENST00000520109 RFC4P35249 363 aa25.8■■□□□ 1.72
TNFRSF10B-206ENST00000520109 HMOX1P09601 288 aa25.79■■□□□ 1.72
TNFRSF10B-206ENST00000520109 PTCD1O75127 700 aaKnown RBP25.78■■□□□ 1.72
TNFRSF10B-206ENST00000520109 RPS6KA4O75676 772 aa25.78■■□□□ 1.72
TNFRSF10B-206ENST00000520109 ZNF784Q8NCA9 323 aaPredicted RBP25.78■■□□□ 1.72
TNFRSF10B-206ENST00000520109 SLC52A2Q9HAB3 445 aa25.78■■□□□ 1.72
TNFRSF10B-206ENST00000520109 U2SURPO15042 1029 aaKnown RBP25.76■■□□□ 1.71
TNFRSF10B-206ENST00000520109 NUDCQ9Y266 331 aa25.76■■□□□ 1.71
TNFRSF10B-206ENST00000520109 AMIGO3Q86WK7 504 aa25.75■■□□□ 1.71
TNFRSF10B-206ENST00000520109 GAS2L2Q8NHY3 880 aa25.75■■□□□ 1.71
TNFRSF10B-206ENST00000520109 SCN11AQ9UI33 1791 aa25.74■■□□□ 1.71
TNFRSF10B-206ENST00000520109 RNMTO43148 476 aaKnown RBP25.73■■□□□ 1.71
TNFRSF10B-206ENST00000520109 MMP10P09238 476 aa25.73■■□□□ 1.71
TNFRSF10B-206ENST00000520109 CNGB1Q14028 1251 aaPredicted RBP25.73■■□□□ 1.71
TNFRSF10B-206ENST00000520109 ARHGEF1Q92888 912 aaKnown RBP25.73■■□□□ 1.71
TNFRSF10B-206ENST00000520109 SLC4A9Q96Q91 983 aa25.73■■□□□ 1.71
TNFRSF10B-206ENST00000520109 COL5A3P25940 1745 aaPredicted RBP25.72■■□□□ 1.71
TNFRSF10B-206ENST00000520109 CRKLP46109 303 aaKnown RBP25.72■■□□□ 1.71
TNFRSF10B-206ENST00000520109 MTHFSDQ2M296 383 aaKnown RBP25.71■■□□□ 1.71
TNFRSF10B-206ENST00000520109 TTC5Q8N0Z6 440 aa25.71■■□□□ 1.71
TNFRSF10B-206ENST00000520109 CCDC87Q9NVE4 849 aa25.71■■□□□ 1.71
TNFRSF10B-206ENST00000520109 PARP3Q9Y6F1 533 aa25.71■■□□□ 1.71
TNFRSF10B-206ENST00000520109 MRC1P22897 1456 aa25.71■■□□□ 1.71
TNFRSF10B-206ENST00000520109 CICQ96RK0 1608 aaPredicted RBP25.7■■□□□ 1.71
TNFRSF10B-206ENST00000520109 YBX3P16989 372 aaKnown RBP eCLIP25.69■■□□□ 1.7
TNFRSF10B-206ENST00000520109 TGFB2P61812 414 aa25.69■■□□□ 1.7
TNFRSF10B-206ENST00000520109 SMIM5Q71RC9 77 aa25.69■■□□□ 1.7
TNFRSF10B-206ENST00000520109 VSIG10Q8N0Z9 540 aa25.69■■□□□ 1.7
TNFRSF10B-206ENST00000520109 GNAT3A8MTJ3 354 aa25.68■■□□□ 1.7
TNFRSF10B-206ENST00000520109 TEFQ10587 303 aa25.68■■□□□ 1.7
TNFRSF10B-206ENST00000520109 LGR6Q9HBX8 967 aa25.68■■□□□ 1.7
TNFRSF10B-206ENST00000520109 COL3A1P02461 1466 aaPredicted RBP25.66■■□□□ 1.7
TNFRSF10B-206ENST00000520109 ZPR1O75312 459 aa25.66■■□□□ 1.7
TNFRSF10B-206ENST00000520109 GYS1P13807 737 aa25.66■■□□□ 1.7
TNFRSF10B-206ENST00000520109 USP42Q9H9J4 1324 aaKnown RBP25.63■■□□□ 1.69
TNFRSF10B-206ENST00000520109 STARD3NLO95772 234 aa25.63■■□□□ 1.69
TNFRSF10B-206ENST00000520109 TEX13AQ9BXU3 409 aaPredicted RBP25.63■■□□□ 1.69
TNFRSF10B-206ENST00000520109 UTRNP46939 3433 aa25.62■■□□□ 1.69
TNFRSF10B-206ENST00000520109 ADAMTS7Q9UKP4 1686 aa25.62■■□□□ 1.69
TNFRSF10B-206ENST00000520109 NEFMP07197 916 aa25.62■■□□□ 1.69
TNFRSF10B-206ENST00000520109 GIGYF1O75420 1035 aaPredicted RBP25.61■■□□□ 1.69
TNFRSF10B-206ENST00000520109 NPM2Q86SE8 214 aaKnown RBP25.61■■□□□ 1.69
TNFRSF10B-206ENST00000520109 DNAJC10Q8IXB1 793 aa25.61■■□□□ 1.69
TNFRSF10B-206ENST00000520109 TJP1Q07157 1748 aa25.6■■□□□ 1.69
TNFRSF10B-206ENST00000520109 SLC39A6Q13433 755 aa25.6■■□□□ 1.69
TNFRSF10B-206ENST00000520109 C10orf71Q711Q0 1435 aa25.6■■□□□ 1.69
TNFRSF10B-206ENST00000520109 U2AF1L5P0DN76 240 aaPredicted RBP25.59■■□□□ 1.69
TNFRSF10B-206ENST00000520109 CYP19A1P11511 503 aaPredicted RBP25.59■■□□□ 1.69
TNFRSF10B-206ENST00000520109 PPP2R1AP30153 589 aa25.59■■□□□ 1.69
TNFRSF10B-206ENST00000520109 PRKAR2BP31323 418 aa25.59■■□□□ 1.69
TNFRSF10B-206ENST00000520109 U2AF1Q01081 240 aaKnown RBP eCLIP25.59■■□□□ 1.696e-10■■■□□ 18.3
TNFRSF10B-206ENST00000520109 INTS5Q6P9B9 1019 aaKnown RBP25.59■■□□□ 1.69
TNFRSF10B-206ENST00000520109 RTF1Q92541 710 aaKnown RBP25.59■■□□□ 1.69
TNFRSF10B-206ENST00000520109 C4AP0C0L4 1744 aa25.59■■□□□ 1.69
TNFRSF10B-206ENST00000520109 FCHSD2O94868 740 aa25.58■■□□□ 1.69
TNFRSF10B-206ENST00000520109 A0A087WZG4 1122 aa25.57■■□□□ 1.68
TNFRSF10B-206ENST00000520109 SOS1Q07889 1333 aaPredicted RBP25.57■■□□□ 1.68
TNFRSF10B-206ENST00000520109 ZNF790Q6PG37 636 aa25.56■■□□□ 1.68
TNFRSF10B-206ENST00000520109 KCPQ6ZWJ8 1503 aa25.56■■□□□ 1.68
TNFRSF10B-206ENST00000520109 KIF13BQ9NQT8 1826 aa25.56■■□□□ 1.68
TNFRSF10B-206ENST00000520109 COL15A1P39059 1388 aa25.56■■□□□ 1.68
TNFRSF10B-206ENST00000520109 PXDNLA1KZ92 1463 aa25.55■■□□□ 1.68
TNFRSF10B-206ENST00000520109 MYH14Q7Z406 1995 aaKnown RBP25.55■■□□□ 1.68
TNFRSF10B-206ENST00000520109 FMNL2Q96PY5 1086 aa25.55■■□□□ 1.68
TNFRSF10B-206ENST00000520109 RSPH6AQ9H0K4 717 aa25.55■■□□□ 1.68
TNFRSF10B-206ENST00000520109 NARFQ9UHQ1 456 aa25.55■■□□□ 1.68
TNFRSF10B-206ENST00000520109 C1QTNF8P60827 252 aa25.54■■□□□ 1.68
TNFRSF10B-206ENST00000520109 SRP68Q9UHB9 627 aaKnown RBP25.54■■□□□ 1.68
TNFRSF10B-206ENST00000520109 VIRMAQ69YN4 1812 aaKnown RBP25.53■■□□□ 1.68
TNFRSF10B-206ENST00000520109 FKBP8Q14318 412 aa25.53■■□□□ 1.68
TNFRSF10B-206ENST00000520109 USPL1Q5W0Q7 1092 aa25.53■■□□□ 1.68
TNFRSF10B-206ENST00000520109 IL17REQ8NFR9 667 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms