RNA–Protein interactions for RNA: ENST00000519838.5

BRD9-218, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 396 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-218ENST00000519838 NPC1L1Q9UHC9 1359 aa18.93■□□□□ 0.62
BRD9-218ENST00000519838 HSP90AB1P08238 724 aaKnown RBP18.92■□□□□ 0.62
BRD9-218ENST00000519838 POLD1P28340 1107 aa18.92■□□□□ 0.62
BRD9-218ENST00000519838 CNGB1Q14028 1251 aaPredicted RBP18.92■□□□□ 0.62
BRD9-218ENST00000519838 ATP6V1AP38606 617 aa18.91■□□□□ 0.62
BRD9-218ENST00000519838 MSL1Q68DK7 614 aa18.91■□□□□ 0.62
BRD9-218ENST00000519838 ZNF831Q5JPB2 1677 aa18.91■□□□□ 0.62
BRD9-218ENST00000519838 COL3A1P02461 1466 aaPredicted RBP18.9■□□□□ 0.62
BRD9-218ENST00000519838 DCAF8L1A6NGE4 600 aa18.9■□□□□ 0.62
BRD9-218ENST00000519838 HMOX1P09601 288 aa18.9■□□□□ 0.62
BRD9-218ENST00000519838 AK7Q96M32 723 aa18.9■□□□□ 0.62
BRD9-218ENST00000519838 COL5A3P25940 1745 aaPredicted RBP18.9■□□□□ 0.62
BRD9-218ENST00000519838 FLAD1Q8NFF5 587 aa18.89■□□□□ 0.61
BRD9-218ENST00000519838 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.88■□□□□ 0.61
BRD9-218ENST00000519838 DIAPH1O60610 1272 aaKnown RBP18.88■□□□□ 0.61
BRD9-218ENST00000519838 PHF14O94880 888 aa18.88■□□□□ 0.61
BRD9-218ENST00000519838 YY1P25490 414 aa18.88■□□□□ 0.61
BRD9-218ENST00000519838 HMGB2P26583 209 aaKnown RBP18.88■□□□□ 0.61
BRD9-218ENST00000519838 C1orf141Q5JVX7 400 aa18.88■□□□□ 0.61
BRD9-218ENST00000519838 KLHL34Q8N239 644 aa18.88■□□□□ 0.61
BRD9-218ENST00000519838 NLGN2Q8NFZ4 835 aa18.88■□□□□ 0.61
BRD9-218ENST00000519838 MYH14Q7Z406 1995 aaKnown RBP18.88■□□□□ 0.61
BRD9-218ENST00000519838 CABP4P57796 275 aa18.87■□□□□ 0.61
BRD9-218ENST00000519838 NFATC2IPQ8NCF5 419 aa18.87■□□□□ 0.61
BRD9-218ENST00000519838 CHD4Q14839 1912 aa18.86■□□□□ 0.61
BRD9-218ENST00000519838 RBM42Q9BTD8 480 aaKnown RBP18.86■□□□□ 0.61
BRD9-218ENST00000519838 SSFA2P28290 1259 aa18.85■□□□□ 0.61
BRD9-218ENST00000519838 AKAP4Q5JQC9 854 aa18.85■□□□□ 0.61
BRD9-218ENST00000519838 LGR6Q9HBX8 967 aa18.85■□□□□ 0.61
BRD9-218ENST00000519838 GNPATO15228 680 aa18.84■□□□□ 0.61
BRD9-218ENST00000519838 MTHFSDQ2M296 383 aaKnown RBP18.84■□□□□ 0.61
BRD9-218ENST00000519838 ADAMTS7Q9UKP4 1686 aa18.84■□□□□ 0.61
BRD9-218ENST00000519838 TJP1Q07157 1748 aa18.83■□□□□ 0.61
BRD9-218ENST00000519838 PTCD1O75127 700 aaKnown RBP18.81■□□□□ 0.6
BRD9-218ENST00000519838 MRC1P22897 1456 aa18.81■□□□□ 0.6
BRD9-218ENST00000519838 CICQ96RK0 1608 aaPredicted RBP18.81■□□□□ 0.6
BRD9-218ENST00000519838 RNMTO43148 476 aaKnown RBP18.8■□□□□ 0.6
BRD9-218ENST00000519838 SLC52A2Q9HAB3 445 aa18.8■□□□□ 0.6
BRD9-218ENST00000519838 C4AP0C0L4 1744 aa18.8■□□□□ 0.6
BRD9-218ENST00000519838 CNTNAP4Q9C0A0 1308 aa18.79■□□□□ 0.6
BRD9-218ENST00000519838 U2SURPO15042 1029 aaKnown RBP18.79■□□□□ 0.6
BRD9-218ENST00000519838 GPR162Q16538 588 aa18.79■□□□□ 0.6
BRD9-218ENST00000519838 RC3H1Q5TC82 1133 aaKnown RBP18.79■□□□□ 0.6
BRD9-218ENST00000519838 RTCBQ9Y3I0 505 aaKnown RBP18.78■□□□□ 0.6
BRD9-218ENST00000519838 YBX3P16989 372 aaKnown RBP eCLIP18.77■□□□□ 0.64e-6■□□□□ 8.3
BRD9-218ENST00000519838 PPP2R1AP30153 589 aa18.77■□□□□ 0.6
BRD9-218ENST00000519838 TRAPPC3LQ5T215 181 aa18.77■□□□□ 0.6
BRD9-218ENST00000519838 ARHGEF1Q92888 912 aaKnown RBP18.77■□□□□ 0.6
BRD9-218ENST00000519838 CD2APQ9Y5K6 639 aa18.77■□□□□ 0.6
BRD9-218ENST00000519838 RPS6KA4O75676 772 aa18.76■□□□□ 0.59
BRD9-218ENST00000519838 SLC39A6Q13433 755 aa18.76■□□□□ 0.59
BRD9-218ENST00000519838 PELP1Q8IZL8 1130 aaKnown RBP18.76■□□□□ 0.59
BRD9-218ENST00000519838 KCPQ6ZWJ8 1503 aa18.75■□□□□ 0.59
BRD9-218ENST00000519838 SIPA1L3O60292 1781 aaPredicted RBP18.75■□□□□ 0.59
BRD9-218ENST00000519838 UBR2Q8IWV8 1755 aa18.75■□□□□ 0.59
BRD9-218ENST00000519838 CRKLP46109 303 aaKnown RBP18.74■□□□□ 0.59
BRD9-218ENST00000519838 PHACTR3Q96KR7 559 aa18.74■□□□□ 0.59
BRD9-218ENST00000519838 KIF13BQ9NQT8 1826 aa18.74■□□□□ 0.59
BRD9-218ENST00000519838 ADRA2BP18089 450 aa18.73■□□□□ 0.59
BRD9-218ENST00000519838 INTS5Q6P9B9 1019 aaKnown RBP18.73■□□□□ 0.59
BRD9-218ENST00000519838 DNAJC10Q8IXB1 793 aa18.73■□□□□ 0.59
BRD9-218ENST00000519838 IL17REQ8NFR9 667 aa18.73■□□□□ 0.59
BRD9-218ENST00000519838 RSPH6AQ9H0K4 717 aa18.73■□□□□ 0.59
BRD9-218ENST00000519838 KIAA1551Q9HCM1 1747 aa18.72■□□□□ 0.59
BRD9-218ENST00000519838 MMP10P09238 476 aa18.72■□□□□ 0.59
BRD9-218ENST00000519838 GYS1P13807 737 aa18.72■□□□□ 0.59
BRD9-218ENST00000519838 ZNF784Q8NCA9 323 aaPredicted RBP18.72■□□□□ 0.59
BRD9-218ENST00000519838 PRKAR2BP31323 418 aa18.71■□□□□ 0.59
BRD9-218ENST00000519838 RFC4P35249 363 aa18.71■□□□□ 0.59
BRD9-218ENST00000519838 CFAP53Q96M91 514 aa18.71■□□□□ 0.59
BRD9-218ENST00000519838 GNAT3A8MTJ3 354 aa18.7■□□□□ 0.58
BRD9-218ENST00000519838 NLGN1Q8N2Q7 840 aa18.7■□□□□ 0.58
BRD9-218ENST00000519838 GAS2L2Q8NHY3 880 aa18.7■□□□□ 0.58
BRD9-218ENST00000519838 N4BP2Q86UW6 1770 aaPredicted RBP18.69■□□□□ 0.58
BRD9-218ENST00000519838 CYP19A1P11511 503 aaPredicted RBP18.69■□□□□ 0.58
BRD9-218ENST00000519838 SRP68Q9UHB9 627 aaKnown RBP18.69■□□□□ 0.58
BRD9-218ENST00000519838 WWC3Q9ULE0 1092 aa18.68■□□□□ 0.58
BRD9-218ENST00000519838 USP42Q9H9J4 1324 aaKnown RBP18.68■□□□□ 0.58
BRD9-218ENST00000519838 CCDC87Q9NVE4 849 aa18.67■□□□□ 0.58
BRD9-218ENST00000519838 CEMIPQ8WUJ3 1361 aa18.67■□□□□ 0.58
BRD9-218ENST00000519838 GRIN3BO60391 1043 aa18.66■□□□□ 0.58
BRD9-218ENST00000519838 U2AF1L5P0DN76 240 aaPredicted RBP18.66■□□□□ 0.58
BRD9-218ENST00000519838 U2AF1Q01081 240 aaKnown RBP eCLIP18.66■□□□□ 0.58
BRD9-218ENST00000519838 FKBP8Q14318 412 aa18.66■□□□□ 0.58
BRD9-218ENST00000519838 NUDCQ9Y266 331 aa18.66■□□□□ 0.58
BRD9-218ENST00000519838 SOS1Q07889 1333 aaPredicted RBP18.66■□□□□ 0.58
BRD9-218ENST00000519838 PXDNLA1KZ92 1463 aa18.65■□□□□ 0.58
BRD9-218ENST00000519838 VSIG10Q8N0Z9 540 aa18.65■□□□□ 0.58
BRD9-218ENST00000519838 ZBTB1Q9Y2K1 713 aa18.65■□□□□ 0.58
BRD9-218ENST00000519838 C10orf71Q711Q0 1435 aa18.65■□□□□ 0.58
BRD9-218ENST00000519838 TEFQ10587 303 aa18.64■□□□□ 0.57
BRD9-218ENST00000519838 ZNF790Q6PG37 636 aa18.64■□□□□ 0.57
BRD9-218ENST00000519838 ZNF496Q96IT1 587 aaPredicted RBP18.64■□□□□ 0.57
BRD9-218ENST00000519838 BRCA1P38398 1863 aaKnown RBP18.64■□□□□ 0.57
BRD9-218ENST00000519838 KCNQ3O43525 872 aa18.63■□□□□ 0.57
BRD9-218ENST00000519838 FCHSD2O94868 740 aa18.63■□□□□ 0.57
BRD9-218ENST00000519838 DDR1Q08345 913 aa18.63■□□□□ 0.57
BRD9-218ENST00000519838 DLG5Q8TDM6 1919 aa18.62■□□□□ 0.57
BRD9-218ENST00000519838 USPL1Q5W0Q7 1092 aa18.62■□□□□ 0.57
BRD9-218ENST00000519838 TTC5Q8N0Z6 440 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms