RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 TSHZ3Q63HK5 1081 aa13.58□□□□□ -0.24
PCDHGB4-201ENST00000519479 TOM1L2Q6ZVM7 507 aa13.58□□□□□ -0.24
PCDHGB4-201ENST00000519479 SPG7Q9UQ90 795 aa13.58□□□□□ -0.24
PCDHGB4-201ENST00000519479 MAP3K19Q56UN5 1328 aa13.58□□□□□ -0.24
PCDHGB4-201ENST00000519479 TNPO1Q92973 898 aaKnown RBP13.58□□□□□ -0.24
PCDHGB4-201ENST00000519479 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.58□□□□□ -0.24
PCDHGB4-201ENST00000519479 CWC27Q6UX04 472 aaKnown RBP13.57□□□□□ -0.24
PCDHGB4-201ENST00000519479 KIF1BPQ96EK5 621 aa13.57□□□□□ -0.24
PCDHGB4-201ENST00000519479 GRPEL1Q9HAV7 217 aa13.57□□□□□ -0.24
PCDHGB4-201ENST00000519479 CEP152O94986 1710 aa13.57□□□□□ -0.24
PCDHGB4-201ENST00000519479 UPF3BQ9BZI7 483 aaKnown RBP13.57□□□□□ -0.24
PCDHGB4-201ENST00000519479 EYA1Q99502 592 aa13.57□□□□□ -0.24
PCDHGB4-201ENST00000519479 E9PCH4 1651 aa13.57□□□□□ -0.24
PCDHGB4-201ENST00000519479 AACSQ86V21 672 aa13.57□□□□□ -0.24
PCDHGB4-201ENST00000519479 RNF214Q8ND24 703 aa13.57□□□□□ -0.24
PCDHGB4-201ENST00000519479 DNAAF4Q8WXU2 420 aa13.57□□□□□ -0.24
PCDHGB4-201ENST00000519479 PKNOX2Q96KN3 472 aa13.57□□□□□ -0.24
PCDHGB4-201ENST00000519479 FLT4P35916 1363 aa13.56□□□□□ -0.24
PCDHGB4-201ENST00000519479 SDSP20132 328 aa13.56□□□□□ -0.24
PCDHGB4-201ENST00000519479 DCTPP1Q9H773 170 aa13.56□□□□□ -0.24
PCDHGB4-201ENST00000519479 FAM135BQ49AJ0 1406 aa13.56□□□□□ -0.24
PCDHGB4-201ENST00000519479 UBAP1LF5GYI3 381 aa13.56□□□□□ -0.24
PCDHGB4-201ENST00000519479 MBD3O95983 291 aa13.56□□□□□ -0.24
PCDHGB4-201ENST00000519479 SSFA2P28290 1259 aa13.56□□□□□ -0.24
PCDHGB4-201ENST00000519479 AMOTQ4VCS5 1084 aa13.56□□□□□ -0.24
PCDHGB4-201ENST00000519479 STRN4Q9NRL3 753 aa13.56□□□□□ -0.24
PCDHGB4-201ENST00000519479 CLTCQ00610 1675 aaKnown RBP13.56□□□□□ -0.24
PCDHGB4-201ENST00000519479 NRDCO43847 1150 aa13.56□□□□□ -0.24
PCDHGB4-201ENST00000519479 LMTK3Q96Q04 1460 aa13.55□□□□□ -0.24
PCDHGB4-201ENST00000519479 RAB11FIP3O75154 756 aa13.55□□□□□ -0.24
PCDHGB4-201ENST00000519479 PSMA5P28066 241 aa13.55□□□□□ -0.24
PCDHGB4-201ENST00000519479 SYTL4Q96C24 671 aaPredicted RBP13.55□□□□□ -0.24
PCDHGB4-201ENST00000519479 DNAJC2Q99543 621 aaKnown RBP13.55□□□□□ -0.24
PCDHGB4-201ENST00000519479 ISY1Q9ULR0 285 aaKnown RBP13.55□□□□□ -0.24
PCDHGB4-201ENST00000519479 NUTM2BA6NNL0 878 aaPredicted RBP13.55□□□□□ -0.24
PCDHGB4-201ENST00000519479 NUTM2EB1AL46 878 aaPredicted RBP13.55□□□□□ -0.24
PCDHGB4-201ENST00000519479 ANXA1P04083 346 aa13.55□□□□□ -0.24
PCDHGB4-201ENST00000519479 NUTM2AQ8IVF1 878 aaPredicted RBP13.55□□□□□ -0.24
PCDHGB4-201ENST00000519479 RBM42Q9BTD8 480 aaKnown RBP13.55□□□□□ -0.24
PCDHGB4-201ENST00000519479 HMGB2P26583 209 aaKnown RBP13.54□□□□□ -0.24
PCDHGB4-201ENST00000519479 CABP4P57796 275 aa13.54□□□□□ -0.24
PCDHGB4-201ENST00000519479 LRRFIP1Q32MZ4 808 aaKnown RBP13.54□□□□□ -0.24
PCDHGB4-201ENST00000519479 CEP85Q6P2H3 762 aa13.54□□□□□ -0.24
PCDHGB4-201ENST00000519479 REREQ9P2R6 1566 aa13.54□□□□□ -0.24
PCDHGB4-201ENST00000519479 PPRC1Q5VV67 1664 aaKnown RBP13.54□□□□□ -0.24
PCDHGB4-201ENST00000519479 PI4KAP2A4QPH2 592 aa13.54□□□□□ -0.24
PCDHGB4-201ENST00000519479 HIP1O00291 1037 aa13.54□□□□□ -0.24
PCDHGB4-201ENST00000519479 PI4KAP1Q8N8J0 262 aa13.54□□□□□ -0.24
PCDHGB4-201ENST00000519479 SF3A1Q15459 793 aaKnown RBP13.54□□□□□ -0.24
PCDHGB4-201ENST00000519479 TOMM22Q9NS69 142 aa13.54□□□□□ -0.24
PCDHGB4-201ENST00000519479 DBF4Q9UBU7 674 aaPredicted RBP13.54□□□□□ -0.24
PCDHGB4-201ENST00000519479 PLEKHG3A1L390 1219 aa13.53□□□□□ -0.24
PCDHGB4-201ENST00000519479 PPP1R42Q7Z4L9 355 aa13.53□□□□□ -0.24
PCDHGB4-201ENST00000519479 CYP46A1Q9Y6A2 500 aa13.53□□□□□ -0.24
PCDHGB4-201ENST00000519479 CHL1O00533 1208 aa13.53□□□□□ -0.24
PCDHGB4-201ENST00000519479 PLEKHM2Q8IWE5 1019 aa13.53□□□□□ -0.24
PCDHGB4-201ENST00000519479 FAM43AQ8N2R8 423 aa13.53□□□□□ -0.24
PCDHGB4-201ENST00000519479 POLR1AO95602 1720 aaPredicted RBP13.53□□□□□ -0.24
PCDHGB4-201ENST00000519479 METP08581 1390 aa13.53□□□□□ -0.24
PCDHGB4-201ENST00000519479 GLRX3O76003 335 aaKnown RBP13.52□□□□□ -0.24
PCDHGB4-201ENST00000519479 PDE1AP54750 535 aa13.52□□□□□ -0.24
PCDHGB4-201ENST00000519479 FIBPO43427 364 aa13.52□□□□□ -0.25
PCDHGB4-201ENST00000519479 LRRC59Q96AG4 307 aaKnown RBP13.52□□□□□ -0.25
PCDHGB4-201ENST00000519479 WDR33Q9C0J8 1336 aaKnown RBP13.52□□□□□ -0.25
PCDHGB4-201ENST00000519479 BICD2Q8TD16 824 aa13.51□□□□□ -0.25
PCDHGB4-201ENST00000519479 SNX21Q969T3 373 aa13.51□□□□□ -0.25
PCDHGB4-201ENST00000519479 G2E3Q7L622 706 aa13.51□□□□□ -0.25
PCDHGB4-201ENST00000519479 JAKMIP1Q96N16 626 aaKnown RBP13.51□□□□□ -0.25
PCDHGB4-201ENST00000519479 LAMC1P11047 1609 aa13.51□□□□□ -0.25
PCDHGB4-201ENST00000519479 RICTORQ6R327 1708 aa13.51□□□□□ -0.25
PCDHGB4-201ENST00000519479 DDX54Q8TDD1 881 aaKnown RBP13.51□□□□□ -0.25
PCDHGB4-201ENST00000519479 CHMP4CQ96CF2 233 aa13.51□□□□□ -0.25
PCDHGB4-201ENST00000519479 FOSBP53539 338 aa13.5□□□□□ -0.25
PCDHGB4-201ENST00000519479 APPP05067 770 aa13.5□□□□□ -0.25
PCDHGB4-201ENST00000519479 WASHC4Q2M389 1173 aa13.5□□□□□ -0.25
PCDHGB4-201ENST00000519479 CHPF2Q9P2E5 772 aa13.5□□□□□ -0.25
PCDHGB4-201ENST00000519479 GTF2E1P29083 439 aaPredicted RBP13.49□□□□□ -0.25
PCDHGB4-201ENST00000519479 HOXC9P31274 260 aa13.49□□□□□ -0.25
PCDHGB4-201ENST00000519479 MAP3K2Q9Y2U5 619 aa13.49□□□□□ -0.25
PCDHGB4-201ENST00000519479 ATP8B2P98198 1209 aa13.49□□□□□ -0.25
PCDHGB4-201ENST00000519479 LARP1Q6PKG0 1096 aaKnown RBP13.49□□□□□ -0.25
PCDHGB4-201ENST00000519479 OTUD7AQ8TE49 926 aaPredicted RBP13.49□□□□□ -0.25
PCDHGB4-201ENST00000519479 ANKRD24Q8TF21 1146 aa13.49□□□□□ -0.25
PCDHGB4-201ENST00000519479 CPLX1O14810 134 aa13.49□□□□□ -0.25
PCDHGB4-201ENST00000519479 CASTP20810 708 aaKnown RBP13.48□□□□□ -0.25
PCDHGB4-201ENST00000519479 CCDC173Q0VFZ6 552 aa13.48□□□□□ -0.25
PCDHGB4-201ENST00000519479 PDRG1Q9NUG6 133 aa13.48□□□□□ -0.25
PCDHGB4-201ENST00000519479 PDCP20941 246 aa13.48□□□□□ -0.25
PCDHGB4-201ENST00000519479 HYPKQ9NX55 129 aa13.48□□□□□ -0.25
PCDHGB4-201ENST00000519479 RHPN1Q8TCX5 695 aa13.48□□□□□ -0.25
PCDHGB4-201ENST00000519479 VWDEQ8N2E2 1590 aa13.48□□□□□ -0.25
PCDHGB4-201ENST00000519479 BAG4O95429 457 aaKnown RBP13.47□□□□□ -0.25
PCDHGB4-201ENST00000519479 RBM25P49756 843 aaKnown RBP13.47□□□□□ -0.25
PCDHGB4-201ENST00000519479 ARHGEF10O15013 1369 aa13.47□□□□□ -0.25
PCDHGB4-201ENST00000519479 DEPDC5O75140 1603 aa13.47□□□□□ -0.25
PCDHGB4-201ENST00000519479 TMEM94Q12767 1356 aa13.47□□□□□ -0.25
PCDHGB4-201ENST00000519479 SLAIN2Q9P270 581 aa13.47□□□□□ -0.25
PCDHGB4-201ENST00000519479 PRPF40BQ6NWY9 871 aaKnown RBP13.47□□□□□ -0.25
PCDHGB4-201ENST00000519479 BLOC1S2Q6QNY1 142 aa13.47□□□□□ -0.25
PCDHGB4-201ENST00000519479 MYD88Q99836 296 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms