RNA–Protein interactions for RNA: ENST00000519295.5

AP3B1-204, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene AP3B1, Length 3,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-204ENST00000519295 NGLY1Q96IV0 654 aa6.89□□□□□ -1.31
AP3B1-204ENST00000519295 PRR36Q9H6K5 1346 aa6.89□□□□□ -1.31
AP3B1-204ENST00000519295 IRX3P78415 501 aaPredicted RBP6.89□□□□□ -1.31
AP3B1-204ENST00000519295 RAD50Q92878 1312 aa6.89□□□□□ -1.31
AP3B1-204ENST00000519295 CRB1P82279 1406 aa6.88□□□□□ -1.31
AP3B1-204ENST00000519295 PPP4CP60510 307 aa6.88□□□□□ -1.31
AP3B1-204ENST00000519295 CT47A1Q5JQC4 288 aaPredicted RBP6.88□□□□□ -1.31
AP3B1-204ENST00000519295 MTA3Q9BTC8 594 aa6.88□□□□□ -1.31
AP3B1-204ENST00000519295 MAF1Q9H063 256 aa6.88□□□□□ -1.31
AP3B1-204ENST00000519295 DICER1Q9UPY3 1922 aaKnown RBP6.88□□□□□ -1.31
AP3B1-204ENST00000519295 RTL1A6NKG5 1358 aa6.88□□□□□ -1.31
AP3B1-204ENST00000519295 SCN7AQ01118 1682 aa6.88□□□□□ -1.31
AP3B1-204ENST00000519295 CNGB1Q14028 1251 aaPredicted RBP6.87□□□□□ -1.31
AP3B1-204ENST00000519295 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.87□□□□□ -1.312e-6■■■■□ 21.8
AP3B1-204ENST00000519295 BSDC1Q9NW68 430 aaPredicted RBP6.87□□□□□ -1.31
AP3B1-204ENST00000519295 SPATA31A1Q5TZJ5 1347 aa6.87□□□□□ -1.31
AP3B1-204ENST00000519295 KIAA0232Q92628 1395 aa6.87□□□□□ -1.31
AP3B1-204ENST00000519295 ZNF316A6NFI3 1004 aaPredicted RBP6.87□□□□□ -1.31
AP3B1-204ENST00000519295 OS9Q13438 667 aaPredicted RBP6.87□□□□□ -1.31
AP3B1-204ENST00000519295 TSGA10IPQ3SY00 556 aa6.87□□□□□ -1.31
AP3B1-204ENST00000519295 GAS2L2Q8NHY3 880 aa6.87□□□□□ -1.31
AP3B1-204ENST00000519295 ANKRD33BA6NCL7 494 aa6.87□□□□□ -1.31
AP3B1-204ENST00000519295 TERF2IPQ9NYB0 399 aa6.87□□□□□ -1.31
AP3B1-204ENST00000519295 PIP4K2BP78356 416 aa6.86□□□□□ -1.31
AP3B1-204ENST00000519295 FOXD4L6Q3SYB3 417 aaPredicted RBP6.86□□□□□ -1.31
AP3B1-204ENST00000519295 FOXD4L3Q6VB84 417 aaPredicted RBP6.86□□□□□ -1.31
AP3B1-204ENST00000519295 RAB3GAP2Q9H2M9 1393 aa6.86□□□□□ -1.31
AP3B1-204ENST00000519295 KCTD17Q8N5Z5 321 aa6.86□□□□□ -1.31
AP3B1-204ENST00000519295 MPHOSPH9Q99550 1183 aa6.86□□□□□ -1.31
AP3B1-204ENST00000519295 RAI14Q9P0K7 980 aa6.86□□□□□ -1.31
AP3B1-204ENST00000519295 PHF8Q9UPP1 1060 aa6.86□□□□□ -1.31
AP3B1-204ENST00000519295 DUOX1Q9NRD9 1551 aa6.86□□□□□ -1.31
AP3B1-204ENST00000519295 IGHDP01880 384 aa6.86□□□□□ -1.31
AP3B1-204ENST00000519295 SLC39A13Q96H72 371 aa6.85□□□□□ -1.31
AP3B1-204ENST00000519295 ADAMTSL1Q8N6G6 1762 aa6.85□□□□□ -1.31
AP3B1-204ENST00000519295 ZNF500O60304 480 aaPredicted RBP6.85□□□□□ -1.31
AP3B1-204ENST00000519295 SKILP12757 684 aa6.85□□□□□ -1.31
AP3B1-204ENST00000519295 NYAP1Q6ZVC0 841 aa6.85□□□□□ -1.31
AP3B1-204ENST00000519295 CAMKK2Q96RR4 588 aa6.85□□□□□ -1.31
AP3B1-204ENST00000519295 LAMB4A4D0S4 1761 aa6.85□□□□□ -1.31
AP3B1-204ENST00000519295 ADCY9O60503 1353 aa6.85□□□□□ -1.31
AP3B1-204ENST00000519295 RIPK4P57078 832 aa6.84□□□□□ -1.31
AP3B1-204ENST00000519295 FAM50AQ14320 339 aaKnown RBP6.84□□□□□ -1.31
AP3B1-204ENST00000519295 MIER1Q8N108 512 aa6.84□□□□□ -1.31
AP3B1-204ENST00000519295 PNISRQ8TF01 805 aaKnown RBP6.84□□□□□ -1.31
AP3B1-204ENST00000519295 RAD21O60216 631 aa6.84□□□□□ -1.31
AP3B1-204ENST00000519295 NPM3O75607 178 aaKnown RBP6.84□□□□□ -1.31
AP3B1-204ENST00000519295 IRX5P78411 483 aaPredicted RBP6.84□□□□□ -1.31
AP3B1-204ENST00000519295 OVOS2A0A0G2JMS6 1433 aa6.84□□□□□ -1.32
AP3B1-204ENST00000519295 MCCD1P59942 119 aaPredicted RBP6.84□□□□□ -1.32
AP3B1-204ENST00000519295 PSME1Q06323 249 aa6.84□□□□□ -1.32
AP3B1-204ENST00000519295 SGIP1Q9BQI5 828 aa6.84□□□□□ -1.32
AP3B1-204ENST00000519295 NOP58Q9Y2X3 529 aaKnown RBP6.83□□□□□ -1.32
AP3B1-204ENST00000519295 ZBTB7CA1YPR0 619 aa6.83□□□□□ -1.32
AP3B1-204ENST00000519295 TCERG1O14776 1098 aaKnown RBP6.83□□□□□ -1.32
AP3B1-204ENST00000519295 PLSCR1O15162 318 aa6.83□□□□□ -1.32
AP3B1-204ENST00000519295 QTRT2Q9H974 415 aaKnown RBP6.83□□□□□ -1.32
AP3B1-204ENST00000519295 ARIH1Q9Y4X5 557 aaPredicted RBP6.83□□□□□ -1.32
AP3B1-204ENST00000519295 EDC4Q6P2E9 1401 aaKnown RBP6.82□□□□□ -1.32
AP3B1-204ENST00000519295 TGFB3P10600 412 aa6.82□□□□□ -1.32
AP3B1-204ENST00000519295 TTC21AQ8NDW8 1320 aa6.82□□□□□ -1.32
AP3B1-204ENST00000519295 FKBP8Q14318 412 aa6.82□□□□□ -1.32
AP3B1-204ENST00000519295 ZKSCAN8Q15776 578 aaPredicted RBP6.82□□□□□ -1.32
AP3B1-204ENST00000519295 CCDC7Q96M83 1385 aa6.82□□□□□ -1.32
AP3B1-204ENST00000519295 ZNF646O15015 1829 aaPredicted RBP6.82□□□□□ -1.32
AP3B1-204ENST00000519295 WASLO00401 505 aaPredicted RBP6.82□□□□□ -1.32
AP3B1-204ENST00000519295 CD151P48509 253 aa6.82□□□□□ -1.32
AP3B1-204ENST00000519295 SETDB1Q15047 1291 aa6.81□□□□□ -1.32
AP3B1-204ENST00000519295 ORAI2Q96SN7 254 aa6.81□□□□□ -1.32
AP3B1-204ENST00000519295 USP21Q9UK80 565 aa6.81□□□□□ -1.32
AP3B1-204ENST00000519295 APLP1P51693 650 aa6.81□□□□□ -1.32
AP3B1-204ENST00000519295 IRF5Q13568 498 aa6.81□□□□□ -1.32
AP3B1-204ENST00000519295 KCNN1Q92952 543 aa6.81□□□□□ -1.32
AP3B1-204ENST00000519295 HELBQ8NG08 1087 aaPredicted RBP6.81□□□□□ -1.32
AP3B1-204ENST00000519295 IRF2BPLQ9H1B7 796 aa6.81□□□□□ -1.32
AP3B1-204ENST00000519295 PPME1Q9Y570 386 aa6.81□□□□□ -1.32
AP3B1-204ENST00000519295 CLCN1P35523 988 aa6.8□□□□□ -1.32
AP3B1-204ENST00000519295 SBF1O95248 1867 aa6.8□□□□□ -1.32
AP3B1-204ENST00000519295 PATL2C9JE40 543 aaKnown RBP6.8□□□□□ -1.32
AP3B1-204ENST00000519295 FOXD4Q12950 439 aaPredicted RBP6.8□□□□□ -1.32
AP3B1-204ENST00000519295 CDCA7Q9BWT1 371 aaPredicted RBP6.8□□□□□ -1.32
AP3B1-204ENST00000519295 WDR90Q96KV7 1748 aa6.8□□□□□ -1.32
AP3B1-204ENST00000519295 ITFG2Q969R8 447 aa6.8□□□□□ -1.32
AP3B1-204ENST00000519295 PXDNLA1KZ92 1463 aa6.8□□□□□ -1.32
AP3B1-204ENST00000519295 LAMB2P55268 1798 aa6.79□□□□□ -1.32
AP3B1-204ENST00000519295 MAP2K1Q02750 393 aaPredicted RBP6.79□□□□□ -1.32
AP3B1-204ENST00000519295 MAPK8IP2Q13387 824 aaPredicted RBP6.79□□□□□ -1.32
AP3B1-204ENST00000519295 SPATA32Q96LK8 384 aa6.79□□□□□ -1.32
AP3B1-204ENST00000519295 NUB1Q9Y5A7 615 aa6.79□□□□□ -1.32
AP3B1-204ENST00000519295 CT47B1P0C2W7 299 aaPredicted RBP6.79□□□□□ -1.32
AP3B1-204ENST00000519295 ATL2Q8NHH9 583 aa6.79□□□□□ -1.32
AP3B1-204ENST00000519295 SPINK5Q9NQ38 1064 aaPredicted RBP6.79□□□□□ -1.32
AP3B1-204ENST00000519295 PPIP5K1Q6PFW1 1433 aa6.79□□□□□ -1.32
AP3B1-204ENST00000519295 TIAM2Q8IVF5 1701 aa6.79□□□□□ -1.32
AP3B1-204ENST00000519295 MFAP1P55081 439 aaKnown RBP6.79□□□□□ -1.32
AP3B1-204ENST00000519295 CSPP1Q1MSJ5 1256 aa6.79□□□□□ -1.32
AP3B1-204ENST00000519295 APBB1IPQ7Z5R6 666 aaPredicted RBP6.79□□□□□ -1.32
AP3B1-204ENST00000519295 RALBP1Q15311 655 aa6.78□□□□□ -1.32
AP3B1-204ENST00000519295 LRRC37AA6NMS7 1700 aa6.78□□□□□ -1.32
AP3B1-204ENST00000519295 TDO2P48775 406 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms