RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 WDR63Q8IWG1 891 aa15.01□□□□□ -0.01
ARFGEF1-202ENST00000517955 RRP7AQ9Y3A4 280 aaKnown RBP15.01□□□□□ -0.01
ARFGEF1-202ENST00000517955 BCL9O00512 1426 aa15□□□□□ -0.01
ARFGEF1-202ENST00000517955 IL16Q14005 1332 aa15□□□□□ -0.01
ARFGEF1-202ENST00000517955 DCAF5Q96JK2 942 aa15□□□□□ -0.01
ARFGEF1-202ENST00000517955 CALD1Q05682 793 aaKnown RBP14.99□□□□□ -0.01
ARFGEF1-202ENST00000517955 PDE3BQ13370 1112 aa14.99□□□□□ -0.01
ARFGEF1-202ENST00000517955 NEUROD2Q15784 382 aa14.99□□□□□ -0.01
ARFGEF1-202ENST00000517955 POTEAQ6S8J7 498 aa14.99□□□□□ -0.01
ARFGEF1-202ENST00000517955 SEPT12Q8IYM1 358 aa14.99□□□□□ -0.01
ARFGEF1-202ENST00000517955 IL17REQ8NFR9 667 aa14.99□□□□□ -0.01
ARFGEF1-202ENST00000517955 RTF1Q92541 710 aaKnown RBP14.99□□□□□ -0.01
ARFGEF1-202ENST00000517955 SCN11AQ9UI33 1791 aa14.98□□□□□ -0.01
ARFGEF1-202ENST00000517955 RNMTO43148 476 aaKnown RBP14.98□□□□□ -0.01
ARFGEF1-202ENST00000517955 BABAM1Q9NWV8 329 aa14.98□□□□□ -0.01
ARFGEF1-202ENST00000517955 ERVV-2B6SEH9 535 aa14.97□□□□□ -0.01
ARFGEF1-202ENST00000517955 MARCH10Q8NA82 808 aaPredicted RBP14.97□□□□□ -0.01
ARFGEF1-202ENST00000517955 DDX54Q8TDD1 881 aaKnown RBP14.97□□□□□ -0.01
ARFGEF1-202ENST00000517955 KDM6AO15550 1401 aaPredicted RBP14.97□□□□□ -0.01
ARFGEF1-202ENST00000517955 VIRMAQ69YN4 1812 aaKnown RBP14.96□□□□□ -0.01
ARFGEF1-202ENST00000517955 MRC1P22897 1456 aa14.96□□□□□ -0.01
ARFGEF1-202ENST00000517955 MPRIPQ6WCQ1 1025 aa14.96□□□□□ -0.01
ARFGEF1-202ENST00000517955 LGR6Q9HBX8 967 aa14.96□□□□□ -0.01
ARFGEF1-202ENST00000517955 ZNF853P0CG23 659 aa14.95□□□□□ -0.02
ARFGEF1-202ENST00000517955 GOLGA2Q08379 1002 aa14.95□□□□□ -0.02
ARFGEF1-202ENST00000517955 MCM10Q7L590 875 aa14.95□□□□□ -0.02
ARFGEF1-202ENST00000517955 TRMT2AQ8IZ69 625 aaKnown RBP14.95□□□□□ -0.02
ARFGEF1-202ENST00000517955 DCTN1Q14203 1278 aa14.94□□□□□ -0.02
ARFGEF1-202ENST00000517955 CFAP44Q96MT7 982 aa14.94□□□□□ -0.02
ARFGEF1-202ENST00000517955 IFT57Q9NWB7 429 aa14.94□□□□□ -0.02
ARFGEF1-202ENST00000517955 SALL2Q9Y467 1007 aaPredicted RBP14.94□□□□□ -0.02
ARFGEF1-202ENST00000517955 SIPA1L3O60292 1781 aaPredicted RBP14.93□□□□□ -0.02
ARFGEF1-202ENST00000517955 E9PSI1 815 aa14.93□□□□□ -0.02
ARFGEF1-202ENST00000517955 CHL1O00533 1208 aa14.93□□□□□ -0.02
ARFGEF1-202ENST00000517955 SLFN5Q08AF3 891 aa14.93□□□□□ -0.02
ARFGEF1-202ENST00000517955 TAF7Q15545 349 aaPredicted RBP14.93□□□□□ -0.02
ARFGEF1-202ENST00000517955 SLC52A2Q9HAB3 445 aa14.93□□□□□ -0.02
ARFGEF1-202ENST00000517955 BRWD3Q6RI45 1802 aa14.93□□□□□ -0.02
ARFGEF1-202ENST00000517955 RGS12O14924 1447 aa14.92□□□□□ -0.02
ARFGEF1-202ENST00000517955 GNAI1P63096 354 aa14.92□□□□□ -0.02
ARFGEF1-202ENST00000517955 KRT27Q7Z3Y8 459 aa14.92□□□□□ -0.02
ARFGEF1-202ENST00000517955 YTHDC1Q96MU7 727 aaKnown RBP14.92□□□□□ -0.02
ARFGEF1-202ENST00000517955 TOGARAM1Q9Y4F4 1720 aa14.92□□□□□ -0.02
ARFGEF1-202ENST00000517955 SENP3-EIF4A1A0A087X0R7 540 aa14.91□□□□□ -0.02
ARFGEF1-202ENST00000517955 A0A0G2JS52 829 aa14.91□□□□□ -0.02
ARFGEF1-202ENST00000517955 PRR29P0C7W0 189 aa14.91□□□□□ -0.02
ARFGEF1-202ENST00000517955 MYT1Q01538 1121 aa14.91□□□□□ -0.02
ARFGEF1-202ENST00000517955 TEFQ10587 303 aa14.91□□□□□ -0.02
ARFGEF1-202ENST00000517955 THUMPD2Q9BTF0 503 aaKnown RBP14.91□□□□□ -0.02
ARFGEF1-202ENST00000517955 FAM196AQ6ZSG2 479 aa14.9□□□□□ -0.02
ARFGEF1-202ENST00000517955 MYH16Q9H6N6 1097 aa14.9□□□□□ -0.02
ARFGEF1-202ENST00000517955 ITGB4P16144 1822 aa14.89□□□□□ -0.03
ARFGEF1-202ENST00000517955 CABP4P57796 275 aa14.89□□□□□ -0.03
ARFGEF1-202ENST00000517955 NFATC2IPQ8NCF5 419 aa14.89□□□□□ -0.03
ARFGEF1-202ENST00000517955 SBF2Q86WG5 1849 aa14.88□□□□□ -0.03
ARFGEF1-202ENST00000517955 DUSP27Q5VZP5 1158 aa14.88□□□□□ -0.03
ARFGEF1-202ENST00000517955 PROM2Q8N271 834 aa14.88□□□□□ -0.03
ARFGEF1-202ENST00000517955 CDCA7LQ96GN5 454 aa14.88□□□□□ -0.03
ARFGEF1-202ENST00000517955 DOT1LQ8TEK3 1739 aa14.87□□□□□ -0.03
ARFGEF1-202ENST00000517955 BTBD11A6QL63 1104 aa14.87□□□□□ -0.03
ARFGEF1-202ENST00000517955 PRIM1P49642 420 aaKnown RBP14.87□□□□□ -0.03
ARFGEF1-202ENST00000517955 TMOD3Q9NYL9 352 aa14.87□□□□□ -0.03
ARFGEF1-202ENST00000517955 KDM3BQ7LBC6 1761 aa14.87□□□□□ -0.03
ARFGEF1-202ENST00000517955 PIGBQ92521 554 aa14.86□□□□□ -0.03
ARFGEF1-202ENST00000517955 MBIPQ9NS73 344 aa14.86□□□□□ -0.03
ARFGEF1-202ENST00000517955 NHSQ6T4R5 1651 aa14.86□□□□□ -0.03
ARFGEF1-202ENST00000517955 KAT6BQ8WYB5 2073 aa14.86□□□□□ -0.03
ARFGEF1-202ENST00000517955 FANCIQ9NVI1 1328 aa14.86□□□□□ -0.03
ARFGEF1-202ENST00000517955 HEG1Q9ULI3 1381 aa14.85□□□□□ -0.03
ARFGEF1-202ENST00000517955 PAPPAQ13219 1627 aa14.85□□□□□ -0.03
ARFGEF1-202ENST00000517955 ZNF790Q6PG37 636 aa14.85□□□□□ -0.03
ARFGEF1-202ENST00000517955 TSPYL4Q9UJ04 414 aa14.85□□□□□ -0.03
ARFGEF1-202ENST00000517955 SOS1Q07889 1333 aaPredicted RBP14.85□□□□□ -0.03
ARFGEF1-202ENST00000517955 CT47B1P0C2W7 299 aaPredicted RBP14.84□□□□□ -0.03
ARFGEF1-202ENST00000517955 BCL11BQ9C0K0 894 aaPredicted RBP14.84□□□□□ -0.03
ARFGEF1-202ENST00000517955 UBR2Q8IWV8 1755 aa14.83□□□□□ -0.03
ARFGEF1-202ENST00000517955 PRKAR2AP13861 404 aaKnown RBP14.83□□□□□ -0.04
ARFGEF1-202ENST00000517955 EIF4A1P60842 406 aaKnown RBP14.83□□□□□ -0.04
ARFGEF1-202ENST00000517955 LAS1LQ9Y4W2 734 aaKnown RBP14.83□□□□□ -0.04
ARFGEF1-202ENST00000517955 KCNQ2O43526 872 aa14.82□□□□□ -0.04
ARFGEF1-202ENST00000517955 HOXB7P09629 217 aa14.82□□□□□ -0.04
ARFGEF1-202ENST00000517955 SMARCC1Q92922 1105 aaPredicted RBP14.82□□□□□ -0.04
ARFGEF1-202ENST00000517955 TSR2Q969E8 191 aaKnown RBP14.82□□□□□ -0.04
ARFGEF1-202ENST00000517955 ACSBG1Q96GR2 724 aa14.82□□□□□ -0.04
ARFGEF1-202ENST00000517955 ATG3Q9NT62 314 aa14.82□□□□□ -0.04
ARFGEF1-202ENST00000517955 MIS18AQ9NYP9 233 aa14.82□□□□□ -0.04
ARFGEF1-202ENST00000517955 FAM182BQ5T319 152 aa14.81□□□□□ -0.04
ARFGEF1-202ENST00000517955 VSIG10Q8N0Z9 540 aa14.81□□□□□ -0.04
ARFGEF1-202ENST00000517955 ZNF428Q96B54 188 aa14.81□□□□□ -0.04
ARFGEF1-202ENST00000517955 KCNQ3O43525 872 aa14.8□□□□□ -0.04
ARFGEF1-202ENST00000517955 TTC5Q8N0Z6 440 aa14.8□□□□□ -0.04
ARFGEF1-202ENST00000517955 SYTL4Q96C24 671 aaPredicted RBP14.8□□□□□ -0.04
ARFGEF1-202ENST00000517955 FMNL2Q96PY5 1086 aa14.8□□□□□ -0.04
ARFGEF1-202ENST00000517955 CHMP4AQ9BY43 222 aa14.8□□□□□ -0.04
ARFGEF1-202ENST00000517955 ASAP1Q9ULH1 1129 aa14.8□□□□□ -0.04
ARFGEF1-202ENST00000517955 KCPQ6ZWJ8 1503 aa14.8□□□□□ -0.04
ARFGEF1-202ENST00000517955 EP400Q96L91 3159 aa14.8□□□□□ -0.04
ARFGEF1-202ENST00000517955 ZNF831Q5JPB2 1677 aa14.8□□□□□ -0.04
ARFGEF1-202ENST00000517955 BTAF1O14981 1849 aa14.8□□□□□ -0.04
ARFGEF1-202ENST00000517955 EXOSC9Q06265 439 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms