RNA–Protein interactions for RNA: ENST00000517018.1

RN7SKP11-201, Transcript of RNA, 7SK small nuclear pseudogene 11, humanhuman

BASIC

Gene RN7SKP11, Length 287 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP11-201ENST00000517018 SIK1P57059 783 aa9.28□□□□□ -0.92
RN7SKP11-201ENST00000517018 WDR43Q15061 677 aaKnown RBP eCLIP9.28□□□□□ -0.92
RN7SKP11-201ENST00000517018 MRS2Q9HD23 443 aa9.28□□□□□ -0.92
RN7SKP11-201ENST00000517018 TRIM35Q9UPQ4 493 aa9.28□□□□□ -0.92
RN7SKP11-201ENST00000517018 BTAF1O14981 1849 aa9.27□□□□□ -0.93
RN7SKP11-201ENST00000517018 RIPK4P57078 832 aa9.27□□□□□ -0.93
RN7SKP11-201ENST00000517018 ITPK1Q13572 414 aa9.27□□□□□ -0.93
RN7SKP11-201ENST00000517018 MCM10Q7L590 875 aa9.27□□□□□ -0.93
RN7SKP11-201ENST00000517018 CCNL1Q9UK58 526 aaPredicted RBP9.27□□□□□ -0.93
RN7SKP11-201ENST00000517018 DOT1LQ8TEK3 1739 aa9.26□□□□□ -0.93
RN7SKP11-201ENST00000517018 NEFMP07197 916 aa9.26□□□□□ -0.93
RN7SKP11-201ENST00000517018 DCTN1Q14203 1278 aa9.26□□□□□ -0.93
RN7SKP11-201ENST00000517018 TAF7Q15545 349 aaPredicted RBP9.26□□□□□ -0.93
RN7SKP11-201ENST00000517018 SLC15A2Q16348 729 aa9.26□□□□□ -0.93
RN7SKP11-201ENST00000517018 RC3H1Q5TC82 1133 aaKnown RBP9.26□□□□□ -0.93
RN7SKP11-201ENST00000517018 NBPF14Q5TI25 921 aa9.26□□□□□ -0.93
RN7SKP11-201ENST00000517018 DIEXFQ68CQ4 756 aaKnown RBP9.26□□□□□ -0.93
RN7SKP11-201ENST00000517018 VSIG10Q8N0Z9 540 aa9.26□□□□□ -0.93
RN7SKP11-201ENST00000517018 BABAM1Q9NWV8 329 aa9.26□□□□□ -0.93
RN7SKP11-201ENST00000517018 APAF1O14727 1248 aa9.25□□□□□ -0.93
RN7SKP11-201ENST00000517018 KCNQ4P56696 695 aa9.25□□□□□ -0.93
RN7SKP11-201ENST00000517018 SLC39A6Q13433 755 aa9.25□□□□□ -0.93
RN7SKP11-201ENST00000517018 ZNF827Q17R98 1081 aa9.25□□□□□ -0.93
RN7SKP11-201ENST00000517018 CCDC27Q2M243 656 aa9.25□□□□□ -0.93
RN7SKP11-201ENST00000517018 ZNF790Q6PG37 636 aa9.25□□□□□ -0.93
RN7SKP11-201ENST00000517018 CCDC146Q8IYE0 955 aa9.25□□□□□ -0.93
RN7SKP11-201ENST00000517018 RTF1Q92541 710 aaKnown RBP9.25□□□□□ -0.93
RN7SKP11-201ENST00000517018 ITGB4P16144 1822 aa9.25□□□□□ -0.93
RN7SKP11-201ENST00000517018 RREB1Q92766 1687 aa9.25□□□□□ -0.93
RN7SKP11-201ENST00000517018 MAPK8IP3Q9UPT6 1336 aa9.25□□□□□ -0.93
RN7SKP11-201ENST00000517018 HEG1Q9ULI3 1381 aa9.24□□□□□ -0.93
RN7SKP11-201ENST00000517018 SCN11AQ9UI33 1791 aa9.24□□□□□ -0.93
RN7SKP11-201ENST00000517018 KCNQ3O43525 872 aa9.24□□□□□ -0.93
RN7SKP11-201ENST00000517018 ZNF853P0CG23 659 aa9.24□□□□□ -0.93
RN7SKP11-201ENST00000517018 LMOD3Q0VAK6 560 aa9.24□□□□□ -0.93
RN7SKP11-201ENST00000517018 TEFQ10587 303 aa9.24□□□□□ -0.93
RN7SKP11-201ENST00000517018 LINC00116Q8NCU8 138 aa9.24□□□□□ -0.93
RN7SKP11-201ENST00000517018 ZNF496Q96IT1 587 aaPredicted RBP9.24□□□□□ -0.93
RN7SKP11-201ENST00000517018 LY75O60449 1722 aa9.24□□□□□ -0.93
RN7SKP11-201ENST00000517018 PAPPAQ13219 1627 aa9.23□□□□□ -0.93
RN7SKP11-201ENST00000517018 BTBD11A6QL63 1104 aa9.23□□□□□ -0.93
RN7SKP11-201ENST00000517018 CHL1O00533 1208 aa9.23□□□□□ -0.93
RN7SKP11-201ENST00000517018 ATP6V1AP38606 617 aa9.23□□□□□ -0.93
RN7SKP11-201ENST00000517018 R3HDM1Q15032 1099 aaKnown RBP9.23□□□□□ -0.93
RN7SKP11-201ENST00000517018 THUMPD2Q9BTF0 503 aaKnown RBP9.23□□□□□ -0.93
RN7SKP11-201ENST00000517018 STK32BQ9NY57 414 aa9.23□□□□□ -0.93
RN7SKP11-201ENST00000517018 RRP7AQ9Y3A4 280 aaKnown RBP9.23□□□□□ -0.93
RN7SKP11-201ENST00000517018 CNTNAP4Q9C0A0 1308 aa9.23□□□□□ -0.93
RN7SKP11-201ENST00000517018 KCPQ6ZWJ8 1503 aa9.22□□□□□ -0.93
RN7SKP11-201ENST00000517018 PTCD1O75127 700 aaKnown RBP9.22□□□□□ -0.93
RN7SKP11-201ENST00000517018 CYP19A1P11511 503 aaPredicted RBP9.22□□□□□ -0.93
RN7SKP11-201ENST00000517018 INTS5Q6P9B9 1019 aaKnown RBP9.22□□□□□ -0.93
RN7SKP11-201ENST00000517018 AMIGO3Q86WK7 504 aa9.22□□□□□ -0.93
RN7SKP11-201ENST00000517018 MIER1Q8N108 512 aa9.22□□□□□ -0.93
RN7SKP11-201ENST00000517018 NGEFQ8N5V2 710 aa9.22□□□□□ -0.93
RN7SKP11-201ENST00000517018 NUP188Q5SRE5 1749 aa9.22□□□□□ -0.93
RN7SKP11-201ENST00000517018 ZNF831Q5JPB2 1677 aa9.21□□□□□ -0.93
RN7SKP11-201ENST00000517018 EIF4A1P60842 406 aaKnown RBP9.21□□□□□ -0.94
RN7SKP11-201ENST00000517018 DNAJC10Q8IXB1 793 aa9.21□□□□□ -0.94
RN7SKP11-201ENST00000517018 FLAD1Q8NFF5 587 aa9.21□□□□□ -0.94
RN7SKP11-201ENST00000517018 FMNL2Q96PY5 1086 aa9.21□□□□□ -0.94
RN7SKP11-201ENST00000517018 RBM42Q9BTD8 480 aaKnown RBP9.21□□□□□ -0.94
RN7SKP11-201ENST00000517018 TEX13AQ9BXU3 409 aaPredicted RBP9.21□□□□□ -0.94
RN7SKP11-201ENST00000517018 PDGFDQ9GZP0 370 aaPredicted RBP9.21□□□□□ -0.94
RN7SKP11-201ENST00000517018 PNPLA7Q6ZV29 1317 aa9.21□□□□□ -0.94
RN7SKP11-201ENST00000517018 PSDA5PKW4 1024 aaPredicted RBP9.2□□□□□ -0.94
RN7SKP11-201ENST00000517018 RPS6KA4O75676 772 aa9.2□□□□□ -0.94
RN7SKP11-201ENST00000517018 SSFA2P28290 1259 aa9.2□□□□□ -0.94
RN7SKP11-201ENST00000517018 COL23A1Q86Y22 540 aaPredicted RBP9.2□□□□□ -0.94
RN7SKP11-201ENST00000517018 WWC1Q8IX03 1113 aa9.2□□□□□ -0.94
RN7SKP11-201ENST00000517018 SLC16A10Q8TF71 515 aa9.2□□□□□ -0.94
RN7SKP11-201ENST00000517018 CFAP44Q96MT7 982 aa9.2□□□□□ -0.94
RN7SKP11-201ENST00000517018 SGIP1Q9BQI5 828 aa9.2□□□□□ -0.94
RN7SKP11-201ENST00000517018 MIS18AQ9NYP9 233 aa9.2□□□□□ -0.94
RN7SKP11-201ENST00000517018 ZNF521Q96K83 1311 aa9.2□□□□□ -0.94
RN7SKP11-201ENST00000517018 SIPA1L3O60292 1781 aaPredicted RBP9.19□□□□□ -0.94
RN7SKP11-201ENST00000517018 GIGYF1O75420 1035 aaPredicted RBP9.19□□□□□ -0.94
RN7SKP11-201ENST00000517018 SNRPA1P09661 255 aaKnown RBP9.19□□□□□ -0.94
RN7SKP11-201ENST00000517018 ADRA2BP18089 450 aa9.19□□□□□ -0.94
RN7SKP11-201ENST00000517018 CRKLP46109 303 aaKnown RBP9.19□□□□□ -0.94
RN7SKP11-201ENST00000517018 NEUROD2Q15784 382 aa9.19□□□□□ -0.94
RN7SKP11-201ENST00000517018 TTC5Q8N0Z6 440 aa9.19□□□□□ -0.94
RN7SKP11-201ENST00000517018 IFT57Q9NWB7 429 aa9.19□□□□□ -0.94
RN7SKP11-201ENST00000517018 USP16Q9Y5T5 823 aa9.19□□□□□ -0.94
RN7SKP11-201ENST00000517018 IL16Q14005 1332 aa9.19□□□□□ -0.94
RN7SKP11-201ENST00000517018 CICQ96RK0 1608 aaPredicted RBP9.19□□□□□ -0.94
RN7SKP11-201ENST00000517018 PRAMEF22A3QJZ6 481 aa9.18□□□□□ -0.94
RN7SKP11-201ENST00000517018 STARD3NLO95772 234 aa9.18□□□□□ -0.94
RN7SKP11-201ENST00000517018 EIF5P55010 431 aaKnown RBP9.18□□□□□ -0.94
RN7SKP11-201ENST00000517018 SRCAPQ6ZRS2 3230 aa9.18□□□□□ -0.94
RN7SKP11-201ENST00000517018 WDR63Q8IWG1 891 aa9.18□□□□□ -0.94
RN7SKP11-201ENST00000517018 FAM9BQ8IZU0 186 aa9.18□□□□□ -0.94
RN7SKP11-201ENST00000517018 TFCP2L1Q9NZI6 479 aa9.18□□□□□ -0.94
RN7SKP11-201ENST00000517018 SOS1Q07889 1333 aaPredicted RBP9.17□□□□□ -0.94
RN7SKP11-201ENST00000517018 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.17□□□□□ -0.94
RN7SKP11-201ENST00000517018 PTGER2P43116 358 aa9.17□□□□□ -0.94
RN7SKP11-201ENST00000517018 CALD1Q05682 793 aaKnown RBP9.17□□□□□ -0.94
RN7SKP11-201ENST00000517018 SMIM5Q71RC9 77 aa9.17□□□□□ -0.94
RN7SKP11-201ENST00000517018 ARHGEF1Q92888 912 aaKnown RBP9.17□□□□□ -0.94
RN7SKP11-201ENST00000517018 AK7Q96M32 723 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms