RNA–Protein interactions for RNA: ENST00000514694.5

MATR3-239, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-239ENST00000514694 CEMIPQ8WUJ3 1361 aa20.45■□□□□ 0.86
MATR3-239ENST00000514694 PALLDQ8WX93 1383 aa20.45■□□□□ 0.86
MATR3-239ENST00000514694 NUP188Q5SRE5 1749 aa20.44■□□□□ 0.86
MATR3-239ENST00000514694 MCM10Q7L590 875 aa20.44■□□□□ 0.86
MATR3-239ENST00000514694 RUNDC1Q96C34 613 aa20.43■□□□□ 0.86
MATR3-239ENST00000514694 PNNQ9H307 717 aaKnown RBP20.43■□□□□ 0.86
MATR3-239ENST00000514694 RRP7AQ9Y3A4 280 aaKnown RBP20.43■□□□□ 0.86
MATR3-239ENST00000514694 ANO8Q9HCE9 1232 aaPredicted RBP20.42■□□□□ 0.86
MATR3-239ENST00000514694 LY75O60449 1722 aa20.41■□□□□ 0.86
MATR3-239ENST00000514694 TMPOP42166 694 aaKnown RBP20.41■□□□□ 0.86
MATR3-239ENST00000514694 THUMPD2Q9BTF0 503 aaKnown RBP20.41■□□□□ 0.86
MATR3-239ENST00000514694 NEFMP07197 916 aa20.4■□□□□ 0.86
MATR3-239ENST00000514694 SLC4A9Q96Q91 983 aa20.4■□□□□ 0.86
MATR3-239ENST00000514694 PAPPAQ13219 1627 aa20.39■□□□□ 0.86
MATR3-239ENST00000514694 SLC39A6Q13433 755 aa20.39■□□□□ 0.85
MATR3-239ENST00000514694 SMARCC1Q92922 1105 aaPredicted RBP20.39■□□□□ 0.85
MATR3-239ENST00000514694 CCNL1Q9UK58 526 aaPredicted RBP20.39■□□□□ 0.85
MATR3-239ENST00000514694 VIRMAQ69YN4 1812 aaKnown RBP20.39■□□□□ 0.85
MATR3-239ENST00000514694 SENP3-EIF4A1A0A087X0R7 540 aa20.38■□□□□ 0.85
MATR3-239ENST00000514694 HTATSF1O43719 755 aaKnown RBP20.38■□□□□ 0.85
MATR3-239ENST00000514694 RIPK4P57078 832 aa20.38■□□□□ 0.85
MATR3-239ENST00000514694 SLC27A3Q5K4L6 730 aa20.38■□□□□ 0.85
MATR3-239ENST00000514694 MIER1Q8N108 512 aa20.38■□□□□ 0.85
MATR3-239ENST00000514694 RTF1Q92541 710 aaKnown RBP20.38■□□□□ 0.85
MATR3-239ENST00000514694 LOC102724428A0A0B4J2F2 783 aa20.37■□□□□ 0.85
MATR3-239ENST00000514694 APAF1O14727 1248 aa20.37■□□□□ 0.85
MATR3-239ENST00000514694 SIK1P57059 783 aa20.37■□□□□ 0.85
MATR3-239ENST00000514694 TEFQ10587 303 aa20.37■□□□□ 0.85
MATR3-239ENST00000514694 NEUROD2Q15784 382 aa20.37■□□□□ 0.85
MATR3-239ENST00000514694 DLG5Q8TDM6 1919 aa20.37■□□□□ 0.85
MATR3-239ENST00000514694 PSDA5PKW4 1024 aaPredicted RBP20.36■□□□□ 0.85
MATR3-239ENST00000514694 ITPK1Q13572 414 aa20.36■□□□□ 0.85
MATR3-239ENST00000514694 R3HDM1Q15032 1099 aaKnown RBP20.36■□□□□ 0.85
MATR3-239ENST00000514694 ZNF827Q17R98 1081 aa20.36■□□□□ 0.85
MATR3-239ENST00000514694 TRIM35Q9UPQ4 493 aa20.36■□□□□ 0.85
MATR3-239ENST00000514694 SIPA1L3O60292 1781 aaPredicted RBP20.36■□□□□ 0.85
MATR3-239ENST00000514694 KCNQ3O43525 872 aa20.35■□□□□ 0.85
MATR3-239ENST00000514694 PTCD1O75127 700 aaKnown RBP20.35■□□□□ 0.85
MATR3-239ENST00000514694 KCPQ6ZWJ8 1503 aa20.34■□□□□ 0.85
MATR3-239ENST00000514694 FAM9BQ8IZU0 186 aa20.34■□□□□ 0.85
MATR3-239ENST00000514694 RBM42Q9BTD8 480 aaKnown RBP20.34■□□□□ 0.85
MATR3-239ENST00000514694 SRCAPQ6ZRS2 3230 aa20.34■□□□□ 0.85
MATR3-239ENST00000514694 LINC00116Q8NCU8 138 aa20.33■□□□□ 0.85
MATR3-239ENST00000514694 MIS18AQ9NYP9 233 aa20.33■□□□□ 0.85
MATR3-239ENST00000514694 CCER2I3L3R5 266 aa20.32■□□□□ 0.84
MATR3-239ENST00000514694 AKT1S1Q96B36 256 aa20.32■□□□□ 0.84
MATR3-239ENST00000514694 BTBD11A6QL63 1104 aa20.31■□□□□ 0.84
MATR3-239ENST00000514694 ATP6V1AP38606 617 aa20.31■□□□□ 0.84
MATR3-239ENST00000514694 SLC15A2Q16348 729 aa20.31■□□□□ 0.84
MATR3-239ENST00000514694 NBPF14Q5TI25 921 aa20.31■□□□□ 0.84
MATR3-239ENST00000514694 ZNF790Q6PG37 636 aa20.31■□□□□ 0.84
MATR3-239ENST00000514694 PDGFDQ9GZP0 370 aaPredicted RBP20.31■□□□□ 0.84
MATR3-239ENST00000514694 AMIGO3Q86WK7 504 aa20.3■□□□□ 0.84
MATR3-239ENST00000514694 C5P01031 1676 aa20.29■□□□□ 0.84
MATR3-239ENST00000514694 TAF7Q15545 349 aaPredicted RBP20.29■□□□□ 0.84
MATR3-239ENST00000514694 ZNF496Q96IT1 587 aaPredicted RBP20.29■□□□□ 0.84
MATR3-239ENST00000514694 STK32BQ9NY57 414 aa20.29■□□□□ 0.84
MATR3-239ENST00000514694 SMIM5Q71RC9 77 aa20.28■□□□□ 0.84
MATR3-239ENST00000514694 UBR2Q8IWV8 1755 aa20.28■□□□□ 0.84
MATR3-239ENST00000514694 LMOD3Q0VAK6 560 aa20.27■□□□□ 0.84
MATR3-239ENST00000514694 DNAJC10Q8IXB1 793 aa20.27■□□□□ 0.84
MATR3-239ENST00000514694 TTC5Q8N0Z6 440 aa20.27■□□□□ 0.84
MATR3-239ENST00000514694 TAF1LQ8IZX4 1826 aa20.27■□□□□ 0.84
MATR3-239ENST00000514694 C4BP0C0L5 1744 aa20.27■□□□□ 0.83
MATR3-239ENST00000514694 TJP1Q07157 1748 aa20.27■□□□□ 0.83
MATR3-239ENST00000514694 ZNF831Q5JPB2 1677 aa20.26■□□□□ 0.83
MATR3-239ENST00000514694 HEG1Q9ULI3 1381 aa20.24■□□□□ 0.83
MATR3-239ENST00000514694 PRAMEF22A3QJZ6 481 aa20.24■□□□□ 0.83
MATR3-239ENST00000514694 PNPLA7Q6ZV29 1317 aa20.24■□□□□ 0.83
MATR3-239ENST00000514694 CICQ96RK0 1608 aaPredicted RBP20.24■□□□□ 0.83
MATR3-239ENST00000514694 COL5A3P25940 1745 aaPredicted RBP20.23■□□□□ 0.83
MATR3-239ENST00000514694 TFCP2L1Q9NZI6 479 aa20.23■□□□□ 0.83
MATR3-239ENST00000514694 TUBGCP6Q96RT7 1819 aa20.23■□□□□ 0.83
MATR3-239ENST00000514694 KDM3BQ7LBC6 1761 aa20.22■□□□□ 0.83
MATR3-239ENST00000514694 VSIG10Q8N0Z9 540 aa20.22■□□□□ 0.83
MATR3-239ENST00000514694 FMNL2Q96PY5 1086 aa20.22■□□□□ 0.83
MATR3-239ENST00000514694 SALL2Q9Y467 1007 aaPredicted RBP20.22■□□□□ 0.83
MATR3-239ENST00000514694 CYP19A1P11511 503 aaPredicted RBP20.21■□□□□ 0.83
MATR3-239ENST00000514694 CRKLP46109 303 aaKnown RBP20.21■□□□□ 0.83
MATR3-239ENST00000514694 INTS5Q6P9B9 1019 aaKnown RBP20.21■□□□□ 0.83
MATR3-239ENST00000514694 AK7Q96M32 723 aa20.21■□□□□ 0.83
MATR3-239ENST00000514694 TSPYL4Q9UJ04 414 aa20.21■□□□□ 0.83
MATR3-239ENST00000514694 CNTNAP4Q9C0A0 1308 aa20.21■□□□□ 0.83
MATR3-239ENST00000514694 CASZ1Q86V15 1759 aa20.21■□□□□ 0.83
MATR3-239ENST00000514694 CHL1O00533 1208 aa20.2■□□□□ 0.82
MATR3-239ENST00000514694 GNPATO15228 680 aa20.2■□□□□ 0.82
MATR3-239ENST00000514694 EIF4A1P60842 406 aaKnown RBP20.2■□□□□ 0.82
MATR3-239ENST00000514694 COL23A1Q86Y22 540 aaPredicted RBP20.2■□□□□ 0.82
MATR3-239ENST00000514694 WWC1Q8IX03 1113 aa20.2■□□□□ 0.82
MATR3-239ENST00000514694 CCDC27Q2M243 656 aa20.19■□□□□ 0.82
MATR3-239ENST00000514694 LAS1LQ9Y4W2 734 aaKnown RBP20.19■□□□□ 0.82
MATR3-239ENST00000514694 MYH14Q7Z406 1995 aaKnown RBP20.19■□□□□ 0.82
MATR3-239ENST00000514694 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.18■□□□□ 0.82
MATR3-239ENST00000514694 PHF14O94880 888 aa20.18■□□□□ 0.82
MATR3-239ENST00000514694 ZNF853P0CG23 659 aa20.18■□□□□ 0.82
MATR3-239ENST00000514694 RC3H1Q5TC82 1133 aaKnown RBP20.18■□□□□ 0.82
MATR3-239ENST00000514694 KRT24Q2M2I5 525 aa20.17■□□□□ 0.82
MATR3-239ENST00000514694 CCDC87Q9NVE4 849 aa20.17■□□□□ 0.82
MATR3-239ENST00000514694 ZBTB1Q9Y2K1 713 aa20.17■□□□□ 0.82
MATR3-239ENST00000514694 USP16Q9Y5T5 823 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms