RNA–Protein interactions for RNA: ENST00000514484.6

LPCAT1-206, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 3

Gene LPCAT1, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-206ENST00000514484 ADAMTS7Q9UKP4 1686 aa25.42■■□□□ 1.66
LPCAT1-206ENST00000514484 MSH5O43196 834 aa25.41■■□□□ 1.66
LPCAT1-206ENST00000514484 ITPK1Q13572 414 aa25.41■■□□□ 1.66
LPCAT1-206ENST00000514484 SGIP1Q9BQI5 828 aa25.41■■□□□ 1.66
LPCAT1-206ENST00000514484 ZNF831Q5JPB2 1677 aa25.4■■□□□ 1.66
LPCAT1-206ENST00000514484 ATP6V1AP38606 617 aa25.4■■□□□ 1.66
LPCAT1-206ENST00000514484 AMIGO3Q86WK7 504 aa25.4■■□□□ 1.66
LPCAT1-206ENST00000514484 COL23A1Q86Y22 540 aaPredicted RBP25.4■■□□□ 1.66
LPCAT1-206ENST00000514484 AK7Q96M32 723 aa25.4■■□□□ 1.66
LPCAT1-206ENST00000514484 MRC1P22897 1456 aa25.4■■□□□ 1.66
LPCAT1-206ENST00000514484 SMIM5Q71RC9 77 aa25.39■■□□□ 1.66
LPCAT1-206ENST00000514484 NFATC2IPQ8NCF5 419 aa25.39■■□□□ 1.66
LPCAT1-206ENST00000514484 RBM42Q9BTD8 480 aaKnown RBP25.39■■□□□ 1.66
LPCAT1-206ENST00000514484 LGR6Q9HBX8 967 aa25.39■■□□□ 1.66
LPCAT1-206ENST00000514484 DDX10Q13206 875 aaKnown RBP25.38■■□□□ 1.65
LPCAT1-206ENST00000514484 SLC4A9Q96Q91 983 aa25.37■■□□□ 1.65
LPCAT1-206ENST00000514484 TJP1Q07157 1748 aa25.37■■□□□ 1.65
LPCAT1-206ENST00000514484 MYH14Q7Z406 1995 aaKnown RBP25.36■■□□□ 1.65
LPCAT1-206ENST00000514484 RNMTO43148 476 aaKnown RBP25.36■■□□□ 1.65
LPCAT1-206ENST00000514484 PHF14O94880 888 aa25.36■■□□□ 1.65
LPCAT1-206ENST00000514484 SLC16A10Q8TF71 515 aa25.36■■□□□ 1.65
LPCAT1-206ENST00000514484 PRKAR2BP31323 418 aa25.35■■□□□ 1.65
LPCAT1-206ENST00000514484 MSL1Q68DK7 614 aa25.35■■□□□ 1.65
LPCAT1-206ENST00000514484 RSPH6AQ9H0K4 717 aa25.35■■□□□ 1.65
LPCAT1-206ENST00000514484 PTCD1O75127 700 aaKnown RBP25.34■■□□□ 1.65
LPCAT1-206ENST00000514484 U2AF1L5P0DN76 240 aaPredicted RBP25.34■■□□□ 1.65
LPCAT1-206ENST00000514484 U2AF1Q01081 240 aaKnown RBP eCLIP25.34■■□□□ 1.65
LPCAT1-206ENST00000514484 SLC52A2Q9HAB3 445 aa25.34■■□□□ 1.65
LPCAT1-206ENST00000514484 NUDCQ9Y266 331 aa25.34■■□□□ 1.65
LPCAT1-206ENST00000514484 MAP3K5Q99683 1374 aa25.33■■□□□ 1.65
LPCAT1-206ENST00000514484 ARXQ96QS3 562 aa25.33■■□□□ 1.65
LPCAT1-206ENST00000514484 FHDC1Q9C0D6 1143 aaPredicted RBP25.33■■□□□ 1.65
LPCAT1-206ENST00000514484 SIPA1L3O60292 1781 aaPredicted RBP25.33■■□□□ 1.65
LPCAT1-206ENST00000514484 GNPATO15228 680 aa25.32■■□□□ 1.64
LPCAT1-206ENST00000514484 PHACTR3Q96KR7 559 aa25.32■■□□□ 1.64
LPCAT1-206ENST00000514484 CICQ96RK0 1608 aaPredicted RBP25.31■■□□□ 1.64
LPCAT1-206ENST00000514484 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.31■■□□□ 1.64
LPCAT1-206ENST00000514484 GAS2L2Q8NHY3 880 aa25.31■■□□□ 1.64
LPCAT1-206ENST00000514484 HMGB2P26583 209 aaKnown RBP25.3■■□□□ 1.64
LPCAT1-206ENST00000514484 UBR2Q8IWV8 1755 aa25.3■■□□□ 1.64
LPCAT1-206ENST00000514484 POLD1P28340 1107 aa25.29■■□□□ 1.64
LPCAT1-206ENST00000514484 SLC39A6Q13433 755 aa25.29■■□□□ 1.64
LPCAT1-206ENST00000514484 FLAD1Q8NFF5 587 aa25.29■■□□□ 1.64
LPCAT1-206ENST00000514484 C4AP0C0L4 1744 aa25.29■■□□□ 1.64
LPCAT1-206ENST00000514484 KCPQ6ZWJ8 1503 aa25.28■■□□□ 1.64
LPCAT1-206ENST00000514484 KLHL34Q8N239 644 aa25.28■■□□□ 1.64
LPCAT1-206ENST00000514484 DLG5Q8TDM6 1919 aa25.27■■□□□ 1.64
LPCAT1-206ENST00000514484 GNAT3A8MTJ3 354 aa25.27■■□□□ 1.64
LPCAT1-206ENST00000514484 SSFA2P28290 1259 aa25.27■■□□□ 1.64
LPCAT1-206ENST00000514484 SYT17Q9BSW7 474 aa25.27■■□□□ 1.64
LPCAT1-206ENST00000514484 IL17REQ8NFR9 667 aa25.25■■□□□ 1.63
LPCAT1-206ENST00000514484 CNTNAP4Q9C0A0 1308 aa25.24■■□□□ 1.63
LPCAT1-206ENST00000514484 FCHSD2O94868 740 aa25.23■■□□□ 1.63
LPCAT1-206ENST00000514484 ZEB1P37275 1124 aaPredicted RBP25.23■■□□□ 1.63
LPCAT1-206ENST00000514484 RALBP1Q15311 655 aa25.22■■□□□ 1.63
LPCAT1-206ENST00000514484 RTCBQ9Y3I0 505 aaKnown RBP25.22■■□□□ 1.63
LPCAT1-206ENST00000514484 CRKLP46109 303 aaKnown RBP25.21■■□□□ 1.63
LPCAT1-206ENST00000514484 TEFQ10587 303 aa25.21■■□□□ 1.63
LPCAT1-206ENST00000514484 RC3H1Q5TC82 1133 aaKnown RBP25.2■■□□□ 1.62
LPCAT1-206ENST00000514484 DNAJC10Q8IXB1 793 aa25.2■■□□□ 1.62
LPCAT1-206ENST00000514484 CEMIPQ8WUJ3 1361 aa25.19■■□□□ 1.62
LPCAT1-206ENST00000514484 MYBBP1AQ9BQG0 1328 aaKnown RBP25.17■■□□□ 1.62
LPCAT1-206ENST00000514484 RPS6KA4O75676 772 aa25.17■■□□□ 1.62
LPCAT1-206ENST00000514484 MCM10Q7L590 875 aa25.17■■□□□ 1.62
LPCAT1-206ENST00000514484 NLGN2Q8NFZ4 835 aa25.17■■□□□ 1.62
LPCAT1-206ENST00000514484 UTRNP46939 3433 aa25.17■■□□□ 1.62
LPCAT1-206ENST00000514484 TRAPPC3LQ5T215 181 aa25.16■■□□□ 1.62
LPCAT1-206ENST00000514484 TTC5Q8N0Z6 440 aa25.16■■□□□ 1.62
LPCAT1-206ENST00000514484 ARHGEF1Q92888 912 aaKnown RBP25.16■■□□□ 1.62
LPCAT1-206ENST00000514484 GOLGB1Q14789 3259 aaKnown RBP25.15■■□□□ 1.62
LPCAT1-206ENST00000514484 DCTN1Q14203 1278 aa25.15■■□□□ 1.62
LPCAT1-206ENST00000514484 DCAF8L1A6NGE4 600 aa25.14■■□□□ 1.62
LPCAT1-206ENST00000514484 INTS5Q6P9B9 1019 aaKnown RBP25.14■■□□□ 1.62
LPCAT1-206ENST00000514484 RTF1Q92541 710 aaKnown RBP25.14■■□□□ 1.62
LPCAT1-206ENST00000514484 ADRA2BP18089 450 aa25.13■■□□□ 1.61
LPCAT1-206ENST00000514484 ZNF790Q6PG37 636 aa25.13■■□□□ 1.61
LPCAT1-206ENST00000514484 ZNF496Q96IT1 587 aaPredicted RBP25.13■■□□□ 1.61
LPCAT1-206ENST00000514484 PLEKHF1Q96S99 279 aa25.13■■□□□ 1.61
LPCAT1-206ENST00000514484 CCDC87Q9NVE4 849 aa25.13■■□□□ 1.61
LPCAT1-206ENST00000514484 KCNQ3O43525 872 aa25.12■■□□□ 1.61
LPCAT1-206ENST00000514484 CYP19A1P11511 503 aaPredicted RBP25.12■■□□□ 1.61
LPCAT1-206ENST00000514484 RFC4P35249 363 aa25.12■■□□□ 1.61
LPCAT1-206ENST00000514484 NEFMP07197 916 aa25.11■■□□□ 1.61
LPCAT1-206ENST00000514484 SRP68Q9UHB9 627 aaKnown RBP25.11■■□□□ 1.61
LPCAT1-206ENST00000514484 HEG1Q9ULI3 1381 aa25.1■■□□□ 1.61
LPCAT1-206ENST00000514484 BTBD11A6QL63 1104 aa25.1■■□□□ 1.61
LPCAT1-206ENST00000514484 ZBTB1Q9Y2K1 713 aa25.1■■□□□ 1.61
LPCAT1-206ENST00000514484 MMP10P09238 476 aa25.09■■□□□ 1.61
LPCAT1-206ENST00000514484 GYS1P13807 737 aa25.09■■□□□ 1.61
LPCAT1-206ENST00000514484 PELP1Q8IZL8 1130 aaKnown RBP25.09■■□□□ 1.61
LPCAT1-206ENST00000514484 VSIG10Q8N0Z9 540 aa25.09■■□□□ 1.61
LPCAT1-206ENST00000514484 CHD4Q14839 1912 aa25.09■■□□□ 1.61
LPCAT1-206ENST00000514484 SOS1Q07889 1333 aaPredicted RBP25.09■■□□□ 1.61
LPCAT1-206ENST00000514484 PRKRIP1Q9H875 184 aaPredicted RBP25.08■■□□□ 1.61
LPCAT1-206ENST00000514484 MAPK8IP3Q9UPT6 1336 aa25.08■■□□□ 1.6
LPCAT1-206ENST00000514484 KIF13BQ9NQT8 1826 aa25.07■■□□□ 1.6
LPCAT1-206ENST00000514484 USP42Q9H9J4 1324 aaKnown RBP25.07■■□□□ 1.6
LPCAT1-206ENST00000514484 COL15A1P39059 1388 aa25.06■■□□□ 1.6
LPCAT1-206ENST00000514484 KDM3BQ7LBC6 1761 aa25.06■■□□□ 1.6
LPCAT1-206ENST00000514484 NFE2L2Q16236 605 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms