RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 ANKARQ7Z5J8 1434 aa15.48■□□□□ 0.07
SDHA-216ENST00000514027 FSD2A1L4K1 749 aa15.48■□□□□ 0.07
SDHA-216ENST00000514027 PDIA4P13667 645 aaKnown RBP15.48■□□□□ 0.07
SDHA-216ENST00000514027 USHBP1Q8N6Y0 703 aa15.48■□□□□ 0.07
SDHA-216ENST00000514027 GOLGA6L3A6NEY3 463 aa15.48■□□□□ 0.07
SDHA-216ENST00000514027 HMMRO75330 724 aa15.48■□□□□ 0.07
SDHA-216ENST00000514027 CCT4P50991 539 aaKnown RBP15.48■□□□□ 0.07
SDHA-216ENST00000514027 FKBP5Q13451 457 aaPredicted RBP15.48■□□□□ 0.07
SDHA-216ENST00000514027 RBM33Q96EV2 1170 aaKnown RBP15.48■□□□□ 0.07
SDHA-216ENST00000514027 K7ELQ4 463 aaPredicted RBP15.47■□□□□ 0.07
SDHA-216ENST00000514027 ZBTB7CA1YPR0 619 aa15.47■□□□□ 0.07
SDHA-216ENST00000514027 TMEM132AQ24JP5 1023 aa15.47■□□□□ 0.07
SDHA-216ENST00000514027 PANK2Q9BZ23 570 aa15.47■□□□□ 0.07
SDHA-216ENST00000514027 MARF1Q9Y4F3 1742 aaKnown RBP15.46■□□□□ 0.07
SDHA-216ENST00000514027 SDSP20132 328 aa15.46■□□□□ 0.07
SDHA-216ENST00000514027 BCL11BQ9C0K0 894 aaPredicted RBP15.46■□□□□ 0.07
SDHA-216ENST00000514027 MAP3K5Q99683 1374 aa15.46■□□□□ 0.06
SDHA-216ENST00000514027 TRAK2O60296 914 aa15.45■□□□□ 0.06
SDHA-216ENST00000514027 DDIT3P35638 169 aa15.45■□□□□ 0.06
SDHA-216ENST00000514027 FLIIQ13045 1269 aa15.45■□□□□ 0.06
SDHA-216ENST00000514027 CCDC30Q5VVM6 783 aa15.45■□□□□ 0.06
SDHA-216ENST00000514027 CASC1Q6TDU7 716 aa15.45■□□□□ 0.06
SDHA-216ENST00000514027 FAM208AQ9UK61 1670 aaKnown RBP15.45■□□□□ 0.06
SDHA-216ENST00000514027 LRRC37A3O60309 1634 aa15.45■□□□□ 0.06
SDHA-216ENST00000514027 DDX11L8A8MPP1 907 aa15.45■□□□□ 0.06
SDHA-216ENST00000514027 GNAI2P04899 355 aa15.44■□□□□ 0.06
SDHA-216ENST00000514027 TNPO1Q92973 898 aaKnown RBP15.44■□□□□ 0.06
SDHA-216ENST00000514027 EXOC6BQ9Y2D4 811 aa15.44■□□□□ 0.06
SDHA-216ENST00000514027 NWD1Q149M9 1564 aa15.44■□□□□ 0.06
SDHA-216ENST00000514027 ESPNB1AK53 854 aa15.44■□□□□ 0.06
SDHA-216ENST00000514027 HTATSF1O43719 755 aaKnown RBP15.44■□□□□ 0.06
SDHA-216ENST00000514027 IL17REQ8NFR9 667 aa15.43■□□□□ 0.06
SDHA-216ENST00000514027 PHF8Q9UPP1 1060 aa15.43■□□□□ 0.06
SDHA-216ENST00000514027 ERBB4Q15303 1308 aa15.43■□□□□ 0.06
SDHA-216ENST00000514027 TSHZ3Q63HK5 1081 aa15.42■□□□□ 0.06
SDHA-216ENST00000514027 CIZ1Q9ULV3 898 aaPredicted RBP15.42■□□□□ 0.06
SDHA-216ENST00000514027 LTN1O94822 1766 aa15.42■□□□□ 0.06
SDHA-216ENST00000514027 GBP4Q96PP9 640 aa15.41■□□□□ 0.06
SDHA-216ENST00000514027 USP26Q9BXU7 913 aa15.41■□□□□ 0.06
SDHA-216ENST00000514027 RAB3GAP1Q15042 981 aa15.41■□□□□ 0.06
SDHA-216ENST00000514027 RABEP1Q15276 862 aa15.41■□□□□ 0.06
SDHA-216ENST00000514027 TAF7Q15545 349 aaPredicted RBP15.41■□□□□ 0.06
SDHA-216ENST00000514027 SETD1BQ9UPS6 1966 aaKnown RBP15.41■□□□□ 0.06
SDHA-216ENST00000514027 GNAI3P08754 354 aa15.4■□□□□ 0.06
SDHA-216ENST00000514027 PDE1AP54750 535 aa15.4■□□□□ 0.06
SDHA-216ENST00000514027 HDGFL1Q5TGJ6 251 aa15.4■□□□□ 0.06
SDHA-216ENST00000514027 PNMA6EA0A0J9YXQ4 647 aa15.39■□□□□ 0.05
SDHA-216ENST00000514027 ESCO1Q5FWF5 840 aa15.39■□□□□ 0.05
SDHA-216ENST00000514027 USP54Q70EL1 1684 aa15.39■□□□□ 0.05
SDHA-216ENST00000514027 LRRCC1Q9C099 1032 aa15.39■□□□□ 0.05
SDHA-216ENST00000514027 LRRFIP2Q9Y608 721 aaKnown RBP15.39■□□□□ 0.05
SDHA-216ENST00000514027 REC8O95072 547 aa15.38■□□□□ 0.05
SDHA-216ENST00000514027 EIF2S2P20042 333 aaKnown RBP15.38■□□□□ 0.05
SDHA-216ENST00000514027 PSME1Q06323 249 aa15.38■□□□□ 0.05
SDHA-216ENST00000514027 ADAMTSL3P82987 1691 aa15.38■□□□□ 0.05
SDHA-216ENST00000514027 SSFA2P28290 1259 aa15.37■□□□□ 0.05
SDHA-216ENST00000514027 ANKLE2Q86XL3 938 aa15.37■□□□□ 0.05
SDHA-216ENST00000514027 PHAXQ9H814 394 aaKnown RBP15.37■□□□□ 0.05
SDHA-216ENST00000514027 ERC2O15083 957 aa15.37■□□□□ 0.05
SDHA-216ENST00000514027 NBPF6Q5VWK0 638 aa15.37■□□□□ 0.05
SDHA-216ENST00000514027 SMAP1Q8IYB5 467 aaPredicted RBP15.37■□□□□ 0.05
SDHA-216ENST00000514027 NBPF4Q96M43 638 aa15.37■□□□□ 0.05
SDHA-216ENST00000514027 MRE11P49959 708 aa15.36■□□□□ 0.05
SDHA-216ENST00000514027 IP6K1Q92551 441 aa15.36■□□□□ 0.05
SDHA-216ENST00000514027 UBTFL1P0CB47 393 aaPredicted RBP15.36■□□□□ 0.05
SDHA-216ENST00000514027 MX1P20591 662 aa15.36■□□□□ 0.05
SDHA-216ENST00000514027 KIAA1211Q6ZU35 1233 aa15.36■□□□□ 0.05
SDHA-216ENST00000514027 CHD2O14647 1828 aaKnown RBP15.36■□□□□ 0.05
SDHA-216ENST00000514027 AK9Q5TCS8 1911 aa15.35■□□□□ 0.05
SDHA-216ENST00000514027 TRIM6-TRIM34B2RNG4 842 aa15.35■□□□□ 0.05
SDHA-216ENST00000514027 ATP8B2P98198 1209 aa15.35■□□□□ 0.05
SDHA-216ENST00000514027 XPCQ01831 940 aaPredicted RBP15.35■□□□□ 0.05
SDHA-216ENST00000514027 RILPL2Q969X0 211 aa15.35■□□□□ 0.05
SDHA-216ENST00000514027 LRRC59Q96AG4 307 aaKnown RBP15.35■□□□□ 0.05
SDHA-216ENST00000514027 MAP7D2Q96T17 732 aa15.35■□□□□ 0.05
SDHA-216ENST00000514027 OSBPL3Q9H4L5 887 aa15.35■□□□□ 0.05
SDHA-216ENST00000514027 LGR6Q9HBX8 967 aa15.35■□□□□ 0.05
SDHA-216ENST00000514027 ST18O60284 1047 aa15.35■□□□□ 0.05
SDHA-216ENST00000514027 CACNA1FO60840 1977 aa15.34■□□□□ 0.05
SDHA-216ENST00000514027 NFAT5O94916 1531 aa15.34■□□□□ 0.05
SDHA-216ENST00000514027 SOS1Q07889 1333 aaPredicted RBP15.34■□□□□ 0.05
SDHA-216ENST00000514027 LMOD2Q6P5Q4 547 aa15.34■□□□□ 0.05
SDHA-216ENST00000514027 BABAM1Q9NWV8 329 aa15.34■□□□□ 0.05
SDHA-216ENST00000514027 IBTKQ9P2D0 1353 aaPredicted RBP15.34■□□□□ 0.05
SDHA-216ENST00000514027 BBXQ8WY36 941 aaPredicted RBP15.33■□□□□ 0.05
SDHA-216ENST00000514027 USP44Q9H0E7 712 aa15.33■□□□□ 0.05
SDHA-216ENST00000514027 RGPD2P0DJD1 1756 aa15.33■□□□□ 0.05
SDHA-216ENST00000514027 PXDNLA1KZ92 1463 aa15.33■□□□□ 0.04
SDHA-216ENST00000514027 ZNF530Q6P9A1 599 aaPredicted RBP15.33■□□□□ 0.04
SDHA-216ENST00000514027 IL1RAPL2Q9NP60 686 aa15.33■□□□□ 0.04
SDHA-216ENST00000514027 GTF2E1P29083 439 aaPredicted RBP15.32■□□□□ 0.04
SDHA-216ENST00000514027 TEFQ10587 303 aa15.32■□□□□ 0.04
SDHA-216ENST00000514027 CHPF2Q9P2E5 772 aa15.32■□□□□ 0.04
SDHA-216ENST00000514027 N4BP2Q86UW6 1770 aaPredicted RBP15.32■□□□□ 0.04
SDHA-216ENST00000514027 CEMIPQ8WUJ3 1361 aa15.32■□□□□ 0.04
SDHA-216ENST00000514027 SALL3Q9BXA9 1300 aa15.32■□□□□ 0.04
SDHA-216ENST00000514027 GOLGA6L22H0YM25 854 aa15.32■□□□□ 0.04
SDHA-216ENST00000514027 KCNH5Q8NCM2 988 aa15.32■□□□□ 0.04
SDHA-216ENST00000514027 SRCIN1Q9C0H9 1055 aa15.32■□□□□ 0.04
SDHA-216ENST00000514027 KCNQ3O43525 872 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms