RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 HSP90AB2PQ58FF8 381 aa14.8□□□□□ -0.04
CLDND1-227ENST00000513452 GGNBP2Q9H3C7 697 aa14.8□□□□□ -0.04
CLDND1-227ENST00000513452 PLEKHG2Q9H7P9 1386 aa14.8□□□□□ -0.04
CLDND1-227ENST00000513452 DPEP1P16444 411 aa14.79□□□□□ -0.04
CLDND1-227ENST00000513452 FLT4P35916 1363 aa14.79□□□□□ -0.04
CLDND1-227ENST00000513452 PRELPP51888 382 aa14.79□□□□□ -0.04
CLDND1-227ENST00000513452 FSTL1Q12841 308 aa14.79□□□□□ -0.04
CLDND1-227ENST00000513452 C9orf131Q5VYM1 1079 aa14.79□□□□□ -0.04
CLDND1-227ENST00000513452 KCPQ6ZWJ8 1503 aa14.79□□□□□ -0.04
CLDND1-227ENST00000513452 ATP6V1AP38606 617 aa14.78□□□□□ -0.04
CLDND1-227ENST00000513452 TMOD3Q9NYL9 352 aa14.78□□□□□ -0.04
CLDND1-227ENST00000513452 ASAP1Q9ULH1 1129 aa14.78□□□□□ -0.04
CLDND1-227ENST00000513452 FYB1O15117 783 aa14.77□□□□□ -0.05
CLDND1-227ENST00000513452 CCDC87Q9NVE4 849 aa14.77□□□□□ -0.05
CLDND1-227ENST00000513452 C4AP0C0L4 1744 aa14.77□□□□□ -0.05
CLDND1-227ENST00000513452 KDM2BQ8NHM5 1336 aa14.76□□□□□ -0.05
CLDND1-227ENST00000513452 TMF1P82094 1093 aa14.76□□□□□ -0.05
CLDND1-227ENST00000513452 NKX1-1Q15270 411 aaPredicted RBP14.76□□□□□ -0.05
CLDND1-227ENST00000513452 BRCA1P38398 1863 aaKnown RBP14.76□□□□□ -0.05
CLDND1-227ENST00000513452 NLGN1Q8N2Q7 840 aa14.75□□□□□ -0.05
CLDND1-227ENST00000513452 TESK2Q96S53 571 aa14.75□□□□□ -0.05
CLDND1-227ENST00000513452 RNF181Q9P0P0 153 aa14.75□□□□□ -0.05
CLDND1-227ENST00000513452 SPG7Q9UQ90 795 aa14.75□□□□□ -0.05
CLDND1-227ENST00000513452 RTCBQ9Y3I0 505 aaKnown RBP14.75□□□□□ -0.05
CLDND1-227ENST00000513452 KIF24Q5T7B8 1368 aa14.74□□□□□ -0.05
CLDND1-227ENST00000513452 TRAPPC3LQ5T215 181 aa14.74□□□□□ -0.05
CLDND1-227ENST00000513452 TNRC6CQ9HCJ0 1690 aaKnown RBP14.74□□□□□ -0.05
CLDND1-227ENST00000513452 NCAPD2Q15021 1401 aa14.74□□□□□ -0.05
CLDND1-227ENST00000513452 KDRP35968 1356 aa14.73□□□□□ -0.05
CLDND1-227ENST00000513452 KIF20BQ96Q89 1820 aa14.73□□□□□ -0.05
CLDND1-227ENST00000513452 RRAGCQ9HB90 399 aa14.73□□□□□ -0.05
CLDND1-227ENST00000513452 PARP3Q9Y6F1 533 aa14.73□□□□□ -0.05
CLDND1-227ENST00000513452 ARFGEF1Q9Y6D6 1849 aa14.73□□□□□ -0.05
CLDND1-227ENST00000513452 ST20-MTHFSA0A0A6YYL1 179 aa14.72□□□□□ -0.05
CLDND1-227ENST00000513452 GYS1P13807 737 aa14.72□□□□□ -0.05
CLDND1-227ENST00000513452 KCNA3P22001 575 aa14.72□□□□□ -0.05
CLDND1-227ENST00000513452 SMC1BQ8NDV3 1235 aa14.72□□□□□ -0.05
CLDND1-227ENST00000513452 ATG3Q9NT62 314 aa14.72□□□□□ -0.05
CLDND1-227ENST00000513452 EMILIN1Q9Y6C2 1016 aa14.72□□□□□ -0.05
CLDND1-227ENST00000513452 HSPA1AP0DMV8 641 aaKnown RBP14.71□□□□□ -0.05
CLDND1-227ENST00000513452 HSPA1BP0DMV9 641 aaKnown RBP14.71□□□□□ -0.05
CLDND1-227ENST00000513452 ARHGEF1Q92888 912 aaKnown RBP14.71□□□□□ -0.05
CLDND1-227ENST00000513452 DCAF5Q96JK2 942 aa14.71□□□□□ -0.05
CLDND1-227ENST00000513452 PIM2Q9P1W9 311 aa14.71□□□□□ -0.05
CLDND1-227ENST00000513452 PHKG2P15735 406 aa14.7□□□□□ -0.06
CLDND1-227ENST00000513452 RFC4P35249 363 aa14.7□□□□□ -0.06
CLDND1-227ENST00000513452 DALRD3Q5D0E6 543 aaKnown RBP14.7□□□□□ -0.06
CLDND1-227ENST00000513452 PCNTO95613 3336 aa14.69□□□□□ -0.06
CLDND1-227ENST00000513452 PPM1GO15355 546 aaPredicted RBP14.69□□□□□ -0.06
CLDND1-227ENST00000513452 IFNL2Q8IZJ0 200 aa14.69□□□□□ -0.06
CLDND1-227ENST00000513452 SLC4A9Q96Q91 983 aa14.69□□□□□ -0.06
CLDND1-227ENST00000513452 RBM42Q9BTD8 480 aaKnown RBP14.69□□□□□ -0.06
CLDND1-227ENST00000513452 COL5A3P25940 1745 aaPredicted RBP14.69□□□□□ -0.06
CLDND1-227ENST00000513452 CNTNAP4Q9C0A0 1308 aa14.68□□□□□ -0.06
CLDND1-227ENST00000513452 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.68□□□□□ -0.06
CLDND1-227ENST00000513452 TONSLQ96HA7 1378 aa14.68□□□□□ -0.06
CLDND1-227ENST00000513452 ZNF831Q5JPB2 1677 aa14.68□□□□□ -0.06
CLDND1-227ENST00000513452 CHRNA5P30532 468 aa14.67□□□□□ -0.06
CLDND1-227ENST00000513452 RC3H1Q5TC82 1133 aaKnown RBP14.67□□□□□ -0.06
CLDND1-227ENST00000513452 EYA1Q99502 592 aa14.67□□□□□ -0.06
CLDND1-227ENST00000513452 ANKRD26Q9UPS8 1709 aa14.66□□□□□ -0.06
CLDND1-227ENST00000513452 RPS6KA4O75676 772 aa14.66□□□□□ -0.06
CLDND1-227ENST00000513452 SLC24A1O60721 1099 aa14.65□□□□□ -0.06
CLDND1-227ENST00000513452 RASSF7Q02833 373 aa14.65□□□□□ -0.06
CLDND1-227ENST00000513452 DDR1Q08345 913 aa14.65□□□□□ -0.06
CLDND1-227ENST00000513452 SRP68Q9UHB9 627 aaKnown RBP14.65□□□□□ -0.06
CLDND1-227ENST00000513452 FKBP8Q14318 412 aa14.64□□□□□ -0.07
CLDND1-227ENST00000513452 ZC3H4Q9UPT8 1303 aaKnown RBP14.64□□□□□ -0.07
CLDND1-227ENST00000513452 SBF1O95248 1867 aa14.63□□□□□ -0.07
CLDND1-227ENST00000513452 WASHC2AQ641Q2 1341 aa14.63□□□□□ -0.07
CLDND1-227ENST00000513452 USP42Q9H9J4 1324 aaKnown RBP14.63□□□□□ -0.07
CLDND1-227ENST00000513452 ERVV-2B6SEH9 535 aa14.62□□□□□ -0.07
CLDND1-227ENST00000513452 KDM6AO15550 1401 aaPredicted RBP14.62□□□□□ -0.07
CLDND1-227ENST00000513452 VEGFAP15692 232 aaPredicted RBP14.62□□□□□ -0.07
CLDND1-227ENST00000513452 MYH14Q7Z406 1995 aaKnown RBP14.62□□□□□ -0.07
CLDND1-227ENST00000513452 TIAM2Q8IVF5 1701 aa14.61□□□□□ -0.07
CLDND1-227ENST00000513452 CRKLP46109 303 aaKnown RBP14.61□□□□□ -0.07
CLDND1-227ENST00000513452 CARD14Q9BXL6 1004 aa14.61□□□□□ -0.07
CLDND1-227ENST00000513452 GLTPD2A6NH11 291 aa14.6□□□□□ -0.07
CLDND1-227ENST00000513452 POLRMTO00411 1230 aaKnown RBP14.6□□□□□ -0.07
CLDND1-227ENST00000513452 PTCD1O75127 700 aaKnown RBP14.6□□□□□ -0.07
CLDND1-227ENST00000513452 LMNB1P20700 586 aa14.6□□□□□ -0.07
CLDND1-227ENST00000513452 CABP4P57796 275 aa14.59□□□□□ -0.07
CLDND1-227ENST00000513452 TJP1Q07157 1748 aa14.58□□□□□ -0.07
CLDND1-227ENST00000513452 HSP90AB1P08238 724 aaKnown RBP14.58□□□□□ -0.08
CLDND1-227ENST00000513452 EIF4A2Q14240 407 aaKnown RBP14.58□□□□□ -0.08
CLDND1-227ENST00000513452 POLKQ9UBT6 870 aa14.57□□□□□ -0.08
CLDND1-227ENST00000513452 ADAMTS7Q9UKP4 1686 aa14.56□□□□□ -0.08
CLDND1-227ENST00000513452 TM4SF1P30408 202 aa14.56□□□□□ -0.08
CLDND1-227ENST00000513452 ZNF530Q6P9A1 599 aaPredicted RBP14.56□□□□□ -0.08
CLDND1-227ENST00000513452 MKRN1Q9UHC7 482 aaKnown RBP14.56□□□□□ -0.08
CLDND1-227ENST00000513452 DLEC1Q9Y238 1755 aa14.55□□□□□ -0.08
CLDND1-227ENST00000513452 ZPR1O75312 459 aa14.55□□□□□ -0.08
CLDND1-227ENST00000513452 CDCA8Q53HL2 280 aa14.55□□□□□ -0.08
CLDND1-227ENST00000513452 USPL1Q5W0Q7 1092 aa14.55□□□□□ -0.08
CLDND1-227ENST00000513452 NFKBIEO00221 500 aa14.54□□□□□ -0.08
CLDND1-227ENST00000513452 SLC34A2O95436 690 aa14.54□□□□□ -0.08
CLDND1-227ENST00000513452 TNNT2P45379 298 aaPredicted RBP14.54□□□□□ -0.08
CLDND1-227ENST00000513452 PLEKHO1Q53GL0 409 aaPredicted RBP14.54□□□□□ -0.08
CLDND1-227ENST00000513452 INTS5Q6P9B9 1019 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms