RNA–Protein interactions for RNA: ENST00000512070.6

TRIO-218, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 8,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-218ENST00000512070 PLVAPQ9BX97 442 aa16.82■□□□□ 0.28
TRIO-218ENST00000512070 FAM177A1Q8N128 213 aaPredicted RBP16.82■□□□□ 0.28
TRIO-218ENST00000512070 ABCC11Q96J66 1382 aa16.82■□□□□ 0.28
TRIO-218ENST00000512070 KIAA1107Q9UPP5 1409 aa16.82■□□□□ 0.28
TRIO-218ENST00000512070 TUBB4AP04350 444 aa16.82■□□□□ 0.28
TRIO-218ENST00000512070 FAM114A1Q8IWE2 563 aa16.82■□□□□ 0.28
TRIO-218ENST00000512070 IFI16Q16666 785 aaKnown RBP16.81■□□□□ 0.28
TRIO-218ENST00000512070 KANK3Q6NY19 840 aa16.81■□□□□ 0.28
TRIO-218ENST00000512070 GLRX3O76003 335 aaKnown RBP16.81■□□□□ 0.28
TRIO-218ENST00000512070 CFAP57Q96MR6 1250 aa16.81■□□□□ 0.28
TRIO-218ENST00000512070 ZNF76P36508 570 aa16.81■□□□□ 0.28
TRIO-218ENST00000512070 PAXBP1Q9Y5B6 917 aa16.81■□□□□ 0.28
TRIO-218ENST00000512070 CEP126Q9P2H0 1117 aa16.81■□□□□ 0.28
TRIO-218ENST00000512070 TOP1P11387 765 aaKnown RBP16.81■□□□□ 0.28
TRIO-218ENST00000512070 GSTTP1A0A1W2PQM5 241 aa16.8■□□□□ 0.28
TRIO-218ENST00000512070 RBM10P98175 930 aaKnown RBP16.8■□□□□ 0.28
TRIO-218ENST00000512070 TMEM266Q2M3C6 531 aa16.8■□□□□ 0.28
TRIO-218ENST00000512070 CACNA2D4Q7Z3S7 1137 aa16.8■□□□□ 0.28
TRIO-218ENST00000512070 EHMT1Q9H9B1 1298 aa16.8■□□□□ 0.28
TRIO-218ENST00000512070 CCDC172P0C7W6 258 aa16.8■□□□□ 0.28
TRIO-218ENST00000512070 YEATS4O95619 227 aa16.8■□□□□ 0.28
TRIO-218ENST00000512070 BRPF3Q9ULD4 1205 aa16.8■□□□□ 0.28
TRIO-218ENST00000512070 TTC21AQ8NDW8 1320 aa16.8■□□□□ 0.28
TRIO-218ENST00000512070 AACSQ86V21 672 aa16.79■□□□□ 0.28
TRIO-218ENST00000512070 NKTRP30414 1462 aaKnown RBP16.79■□□□□ 0.28
TRIO-218ENST00000512070 GOLIM4O00461 696 aa16.79■□□□□ 0.28
TRIO-218ENST00000512070 ANKRD30BQ9BXX2 1392 aa16.79■□□□□ 0.28
TRIO-218ENST00000512070 KIF1BPQ96EK5 621 aa16.79■□□□□ 0.28
TRIO-218ENST00000512070 ATP2B2Q01814 1243 aa16.79■□□□□ 0.28
TRIO-218ENST00000512070 GRIPAP1Q4V328 841 aa16.79■□□□□ 0.28
TRIO-218ENST00000512070 JAKMIP1Q96N16 626 aaKnown RBP16.79■□□□□ 0.28
TRIO-218ENST00000512070 ERBINQ96RT1 1412 aa16.79■□□□□ 0.28
TRIO-218ENST00000512070 NUP133Q8WUM0 1156 aa16.79■□□□□ 0.28
TRIO-218ENST00000512070 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.79■□□□□ 0.281e-8■□□□□ 11
TRIO-218ENST00000512070 V9GYY5 206 aaPredicted RBP16.79■□□□□ 0.28
TRIO-218ENST00000512070 CASTP20810 708 aaKnown RBP16.78■□□□□ 0.28
TRIO-218ENST00000512070 GGNBP2Q9H3C7 697 aa16.78■□□□□ 0.28
TRIO-218ENST00000512070 MTMR7Q9Y216 660 aa16.78■□□□□ 0.28
TRIO-218ENST00000512070 NESP48681 1621 aa16.78■□□□□ 0.28
TRIO-218ENST00000512070 EXOSC9Q06265 439 aaKnown RBP16.78■□□□□ 0.28
TRIO-218ENST00000512070 STXBP4Q6ZWJ1 553 aa16.78■□□□□ 0.28
TRIO-218ENST00000512070 DDX19AQ9NUU7 478 aaKnown RBP16.78■□□□□ 0.28
TRIO-218ENST00000512070 MPHOSPH10O00566 681 aaKnown RBP16.78■□□□□ 0.28
TRIO-218ENST00000512070 MATR3P43243 847 aaKnown RBP eCLIP16.78■□□□□ 0.281e-6■■■□□ 18.5
TRIO-218ENST00000512070 AMPD3Q01432 767 aa16.78■□□□□ 0.28
TRIO-218ENST00000512070 CCDC12Q8WUD4 166 aaPredicted RBP16.78■□□□□ 0.28
TRIO-218ENST00000512070 PRIMPOLQ96LW4 560 aa16.78■□□□□ 0.28
TRIO-218ENST00000512070 DYNC1I1O14576 645 aa16.78■□□□□ 0.28
TRIO-218ENST00000512070 FCHSD2O94868 740 aa16.78■□□□□ 0.28
TRIO-218ENST00000512070 SRGAP3O43295 1099 aa16.77■□□□□ 0.28
TRIO-218ENST00000512070 RPGRIP1LQ68CZ1 1315 aa16.77■□□□□ 0.28
TRIO-218ENST00000512070 IVLP07476 585 aa16.77■□□□□ 0.28
TRIO-218ENST00000512070 LRRC27Q9C0I9 530 aa16.77■□□□□ 0.28
TRIO-218ENST00000512070 RNF41Q9H4P4 317 aaPredicted RBP16.77■□□□□ 0.28
TRIO-218ENST00000512070 SLC52A1Q9NWF4 448 aa16.77■□□□□ 0.28
TRIO-218ENST00000512070 FSD2A1L4K1 749 aa16.77■□□□□ 0.28
TRIO-218ENST00000512070 C9orf84Q5VXU9 1444 aa16.77■□□□□ 0.27
TRIO-218ENST00000512070 AIDAQ96BJ3 306 aa16.77■□□□□ 0.27
TRIO-218ENST00000512070 A0A087WZG4 1122 aa16.77■□□□□ 0.27
TRIO-218ENST00000512070 ZNF652Q9Y2D9 606 aa16.77■□□□□ 0.27
TRIO-218ENST00000512070 CABP4P57796 275 aa16.76■□□□□ 0.27
TRIO-218ENST00000512070 KIF4BQ2VIQ3 1234 aa16.76■□□□□ 0.27
TRIO-218ENST00000512070 ALDH1L2Q3SY69 923 aa16.76■□□□□ 0.27
TRIO-218ENST00000512070 SLF2Q8IX21 1173 aa16.76■□□□□ 0.27
TRIO-218ENST00000512070 SSR1P43307 286 aaKnown RBP16.76■□□□□ 0.27
TRIO-218ENST00000512070 STX1AQ16623 288 aa16.76■□□□□ 0.27
TRIO-218ENST00000512070 IGHMBP2P38935 993 aaKnown RBP16.76■□□□□ 0.27
TRIO-218ENST00000512070 TMOD2Q9NZR1 351 aa16.76■□□□□ 0.27
TRIO-218ENST00000512070 STK3Q13188 491 aa16.75■□□□□ 0.27
TRIO-218ENST00000512070 STMN4Q9H169 189 aaPredicted RBP16.75■□□□□ 0.27
TRIO-218ENST00000512070 SSBP05455 408 aaKnown RBP eCLIP16.75■□□□□ 0.27
TRIO-218ENST00000512070 FKBP4Q02790 459 aaKnown RBP eCLIP16.75■□□□□ 0.271e-6■■■■■ 33.9
TRIO-218ENST00000512070 CABP2Q9NPB3 220 aa16.75■□□□□ 0.27
TRIO-218ENST00000512070 SYCE3A1L190 88 aa16.75■□□□□ 0.27
TRIO-218ENST00000512070 ARAP1Q96P48 1450 aa16.75■□□□□ 0.27
TRIO-218ENST00000512070 AQRO60306 1485 aaKnown RBP eCLIP16.75■□□□□ 0.273e-6■■□□□ 12
TRIO-218ENST00000512070 FERP16591 822 aa16.75■□□□□ 0.27
TRIO-218ENST00000512070 LRRC45Q96CN5 670 aa16.75■□□□□ 0.27
TRIO-218ENST00000512070 AKNAQ7Z591 1439 aa16.75■□□□□ 0.27
TRIO-218ENST00000512070 LARP1Q6PKG0 1096 aaKnown RBP16.74■□□□□ 0.27
TRIO-218ENST00000512070 SMARCC1Q92922 1105 aaPredicted RBP16.74■□□□□ 0.27
TRIO-218ENST00000512070 CCDC97Q96F63 343 aaPredicted RBP16.74■□□□□ 0.27
TRIO-218ENST00000512070 BCL11BQ9C0K0 894 aaPredicted RBP16.74■□□□□ 0.27
TRIO-218ENST00000512070 TIAM1Q13009 1591 aa16.74■□□□□ 0.27
TRIO-218ENST00000512070 ERICH4A6NGS2 130 aa16.74■□□□□ 0.27
TRIO-218ENST00000512070 CKAP4Q07065 602 aaKnown RBP16.74■□□□□ 0.27
TRIO-218ENST00000512070 CLIP2Q9UDT6 1046 aa16.74■□□□□ 0.27
TRIO-218ENST00000512070 WDHD1O75717 1129 aaPredicted RBP16.74■□□□□ 0.27
TRIO-218ENST00000512070 CTR9Q6PD62 1173 aa16.74■□□□□ 0.27
TRIO-218ENST00000512070 CEP112Q8N8E3 955 aa16.74■□□□□ 0.27
TRIO-218ENST00000512070 LRP2BPQ9P2M1 347 aa16.74■□□□□ 0.27
TRIO-218ENST00000512070 SPECC1Q5M775 1068 aa16.74■□□□□ 0.27
TRIO-218ENST00000512070 NSRP1Q9H0G5 558 aaKnown RBP16.74■□□□□ 0.27
TRIO-218ENST00000512070 NUP88Q99567 741 aaPredicted RBP16.73■□□□□ 0.27
TRIO-218ENST00000512070 C8orf76Q96K31 380 aa16.73■□□□□ 0.27
TRIO-218ENST00000512070 PRPHP41219 470 aa16.73■□□□□ 0.27
TRIO-218ENST00000512070 UVSSAQ2YD98 709 aa16.73■□□□□ 0.27
TRIO-218ENST00000512070 GTPBP4Q9BZE4 634 aaKnown RBP16.73■□□□□ 0.27
TRIO-218ENST00000512070 IQCA1Q86XH1 822 aa16.73■□□□□ 0.27
TRIO-218ENST00000512070 CTCFLQ8NI51 663 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms