RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 PLCD4Q9BRC7 762 aa9.71□□□□□ -0.85
HTT-208ENST00000510626 ANKRD30BQ9BXX2 1392 aa9.71□□□□□ -0.85
HTT-208ENST00000510626 FBXW7Q969H0 707 aa9.71□□□□□ -0.85
HTT-208ENST00000510626 RPGRIP1LQ68CZ1 1315 aa9.71□□□□□ -0.85
HTT-208ENST00000510626 BMP15O95972 392 aa9.71□□□□□ -0.85
HTT-208ENST00000510626 CEP135Q66GS9 1140 aa9.71□□□□□ -0.85
HTT-208ENST00000510626 WWC2Q6AWC2 1192 aa9.71□□□□□ -0.85
HTT-208ENST00000510626 NOB1Q9ULX3 412 aaKnown RBP9.71□□□□□ -0.85
HTT-208ENST00000510626 B4GALNT4Q76KP1 1039 aa9.71□□□□□ -0.86
HTT-208ENST00000510626 CLUL1Q15846 466 aa9.71□□□□□ -0.86
HTT-208ENST00000510626 CFAP100Q494V2 611 aa9.71□□□□□ -0.86
HTT-208ENST00000510626 FKBP15Q5T1M5 1219 aa9.71□□□□□ -0.86
HTT-208ENST00000510626 CTAGE1Q96RT6 745 aa9.71□□□□□ -0.86
HTT-208ENST00000510626 CCDC27Q2M243 656 aa9.71□□□□□ -0.86
HTT-208ENST00000510626 HNRNPMP52272 730 aaKnown RBP eCLIP9.71□□□□□ -0.86
HTT-208ENST00000510626 MKRN1Q9UHC7 482 aaKnown RBP9.71□□□□□ -0.86
HTT-208ENST00000510626 TTC14Q96N46 770 aa9.7□□□□□ -0.86
HTT-208ENST00000510626 WASHC4Q2M389 1173 aa9.7□□□□□ -0.86
HTT-208ENST00000510626 CROCCP2Q86T23 111 aa9.7□□□□□ -0.86
HTT-208ENST00000510626 IFFO1Q0D2I5 559 aa9.7□□□□□ -0.86
HTT-208ENST00000510626 LIMCH1Q9UPQ0 1083 aa9.7□□□□□ -0.86
HTT-208ENST00000510626 CCDC172P0C7W6 258 aa9.7□□□□□ -0.86
HTT-208ENST00000510626 ATL3Q6DD88 541 aa9.7□□□□□ -0.86
HTT-208ENST00000510626 LRPPRCP42704 1394 aaKnown RBP9.7□□□□□ -0.86
HTT-208ENST00000510626 CAMSAP2Q08AD1 1489 aa9.7□□□□□ -0.86
HTT-208ENST00000510626 ADCY5O95622 1261 aa9.69□□□□□ -0.86
HTT-208ENST00000510626 TNPO1Q92973 898 aaKnown RBP9.69□□□□□ -0.86
HTT-208ENST00000510626 NCOA2Q15596 1464 aa9.69□□□□□ -0.86
HTT-208ENST00000510626 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.69□□□□□ -0.86
HTT-208ENST00000510626 GLRX3O76003 335 aaKnown RBP9.69□□□□□ -0.86
HTT-208ENST00000510626 KIF4BQ2VIQ3 1234 aa9.69□□□□□ -0.86
HTT-208ENST00000510626 TSG101Q99816 390 aa9.69□□□□□ -0.86
HTT-208ENST00000510626 ZSCAN16Q9H4T2 348 aaPredicted RBP9.69□□□□□ -0.86
HTT-208ENST00000510626 EIF5P55010 431 aaKnown RBP9.69□□□□□ -0.86
HTT-208ENST00000510626 ANAPC15P60006 121 aa9.69□□□□□ -0.86
HTT-208ENST00000510626 KIF3CO14782 793 aa9.69□□□□□ -0.86
HTT-208ENST00000510626 ZFYVE27Q5T4F4 411 aa9.69□□□□□ -0.86
HTT-208ENST00000510626 RIC3Q7Z5B4 369 aa9.69□□□□□ -0.86
HTT-208ENST00000510626 RSRC1Q96IZ7 334 aaKnown RBP9.69□□□□□ -0.86
HTT-208ENST00000510626 AQRO60306 1485 aaKnown RBP eCLIP9.69□□□□□ -0.867e-7■■■■■ 31
HTT-208ENST00000510626 CCDC69A6NI79 296 aa9.68□□□□□ -0.86
HTT-208ENST00000510626 HSF2BPO75031 334 aa9.68□□□□□ -0.86
HTT-208ENST00000510626 CEP63Q96MT8 703 aa9.68□□□□□ -0.86
HTT-208ENST00000510626 PRPHP41219 470 aa9.68□□□□□ -0.86
HTT-208ENST00000510626 SLFN5Q08AF3 891 aa9.68□□□□□ -0.86
HTT-208ENST00000510626 DDX46Q7L014 1031 aaKnown RBP9.68□□□□□ -0.86
HTT-208ENST00000510626 MTHFSP49914 203 aa9.68□□□□□ -0.86
HTT-208ENST00000510626 PLVAPQ9BX97 442 aa9.68□□□□□ -0.86
HTT-208ENST00000510626 ZNF287Q9HBT7 754 aa9.68□□□□□ -0.86
HTT-208ENST00000510626 RASAL2Q9UJF2 1139 aa9.68□□□□□ -0.86
HTT-208ENST00000510626 IL16Q14005 1332 aa9.68□□□□□ -0.86
HTT-208ENST00000510626 NSD2O96028 1365 aa9.68□□□□□ -0.86
HTT-208ENST00000510626 TWISTNBQ3B726 338 aaPredicted RBP9.68□□□□□ -0.86
HTT-208ENST00000510626 LRSAM1Q6UWE0 723 aa9.68□□□□□ -0.86
HTT-208ENST00000510626 KRT18P05783 430 aaKnown RBP9.68□□□□□ -0.86
HTT-208ENST00000510626 PLEKHO1Q53GL0 409 aaPredicted RBP9.68□□□□□ -0.86
HTT-208ENST00000510626 SREK1Q8WXA9 508 aaKnown RBP9.68□□□□□ -0.86
HTT-208ENST00000510626 RAB34Q9BZG1 259 aa9.68□□□□□ -0.86
HTT-208ENST00000510626 ARHGAP25P42331 645 aa9.68□□□□□ -0.86
HTT-208ENST00000510626 WDR66Q8TBY9 1149 aa9.68□□□□□ -0.86
HTT-208ENST00000510626 CCDC141Q6ZP82 1450 aa9.68□□□□□ -0.86
HTT-208ENST00000510626 ELP1O95163 1332 aa9.68□□□□□ -0.86
HTT-208ENST00000510626 TBC1D2Q9BYX2 928 aa9.67□□□□□ -0.86
HTT-208ENST00000510626 SF3B2Q13435 895 aaKnown RBP9.67□□□□□ -0.86
HTT-208ENST00000510626 UTP14CQ5TAP6 766 aaKnown RBP9.67□□□□□ -0.86
HTT-208ENST00000510626 CEP128Q6ZU80 1094 aa9.67□□□□□ -0.86
HTT-208ENST00000510626 ERBINQ96RT1 1412 aa9.67□□□□□ -0.86
HTT-208ENST00000510626 FAM200AQ8TCP9 573 aa9.67□□□□□ -0.86
HTT-208ENST00000510626 SENP3Q9H4L4 574 aaPredicted RBP9.67□□□□□ -0.86
HTT-208ENST00000510626 LRRC27Q9C0I9 530 aa9.67□□□□□ -0.86
HTT-208ENST00000510626 RAD50Q92878 1312 aa9.67□□□□□ -0.86
HTT-208ENST00000510626 EBAG9O00559 213 aa9.67□□□□□ -0.86
HTT-208ENST00000510626 CASTP20810 708 aaKnown RBP9.67□□□□□ -0.86
HTT-208ENST00000510626 TAX1BP1Q86VP1 789 aa9.67□□□□□ -0.86
HTT-208ENST00000510626 TSGA10Q9BZW7 698 aa9.67□□□□□ -0.86
HTT-208ENST00000510626 LMAN1P49257 510 aa9.67□□□□□ -0.86
HTT-208ENST00000510626 CBX1P83916 185 aa9.67□□□□□ -0.86
HTT-208ENST00000510626 ELL2O00472 640 aaPredicted RBP9.67□□□□□ -0.86
HTT-208ENST00000510626 SNW1Q13573 536 aaKnown RBP9.67□□□□□ -0.86
HTT-208ENST00000510626 BUB1BO60566 1050 aaPredicted RBP9.67□□□□□ -0.86
HTT-208ENST00000510626 TTC31Q49AM3 519 aaPredicted RBP9.67□□□□□ -0.86
HTT-208ENST00000510626 MSL1Q68DK7 614 aa9.67□□□□□ -0.86
HTT-208ENST00000510626 SPAG1Q07617 926 aa9.67□□□□□ -0.86
HTT-208ENST00000510626 CCDC121Q6ZUS5 278 aa9.67□□□□□ -0.86
HTT-208ENST00000510626 KIF1BPQ96EK5 621 aa9.67□□□□□ -0.86
HTT-208ENST00000510626 PTPRGP23470 1445 aa9.66□□□□□ -0.86
HTT-208ENST00000510626 ZKSCAN5Q9Y2L8 839 aa9.66□□□□□ -0.86
HTT-208ENST00000510626 EIF2S2P20042 333 aaKnown RBP9.66□□□□□ -0.86
HTT-208ENST00000510626 PRDM2Q13029 1718 aa9.66□□□□□ -0.86
HTT-208ENST00000510626 C10orf67Q8IYJ2 551 aa9.66□□□□□ -0.86
HTT-208ENST00000510626 NDC80O14777 642 aa9.66□□□□□ -0.86
HTT-208ENST00000510626 JAKMIP2Q96AA8 810 aa9.66□□□□□ -0.86
HTT-208ENST00000510626 BRPF1P55201 1214 aaPredicted RBP9.66□□□□□ -0.86
HTT-208ENST00000510626 CETN1Q12798 172 aa9.66□□□□□ -0.86
HTT-208ENST00000510626 NCBP3Q53F19 620 aaKnown RBP9.66□□□□□ -0.86
HTT-208ENST00000510626 JAKMIP1Q96N16 626 aaKnown RBP9.66□□□□□ -0.86
HTT-208ENST00000510626 RASSF4Q9H2L5 321 aa9.66□□□□□ -0.86
HTT-208ENST00000510626 GTF2F1P35269 517 aaKnown RBP eCLIP9.66□□□□□ -0.861e-7■■■■■ 40.3
HTT-208ENST00000510626 ZSCAN23Q3MJ62 389 aa9.66□□□□□ -0.86
HTT-208ENST00000510626 SEPT6Q14141 434 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms