RNA–Protein interactions for RNA: ENST00000510356.5

CALCOCO2-217, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 1 (best)

Gene CALCOCO2, Length 1,009 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-217ENST00000510356 ADGRB1O14514 1584 aa12.08□□□□□ -0.48
CALCOCO2-217ENST00000510356 WDR17Q8IZU2 1322 aa12.08□□□□□ -0.48
CALCOCO2-217ENST00000510356 UTRNP46939 3433 aa12.06□□□□□ -0.48
CALCOCO2-217ENST00000510356 CARD10Q9BWT7 1032 aa12.06□□□□□ -0.48
CALCOCO2-217ENST00000510356 GPBP1L1Q9HC44 474 aaPredicted RBP12.06□□□□□ -0.48
CALCOCO2-217ENST00000510356 SBF2Q86WG5 1849 aa12.06□□□□□ -0.48
CALCOCO2-217ENST00000510356 CSB-PGBD3P0DP91 1061 aa12.05□□□□□ -0.48
CALCOCO2-217ENST00000510356 LRRC37A3O60309 1634 aa12.04□□□□□ -0.48
CALCOCO2-217ENST00000510356 DPYSL4O14531 572 aa12.04□□□□□ -0.48
CALCOCO2-217ENST00000510356 SLC34A2O95436 690 aa12.04□□□□□ -0.48
CALCOCO2-217ENST00000510356 OXER1Q8TDS5 423 aa12.04□□□□□ -0.48
CALCOCO2-217ENST00000510356 ARIH1Q9Y4X5 557 aaPredicted RBP12.04□□□□□ -0.48
CALCOCO2-217ENST00000510356 HOXB3P14651 431 aaPredicted RBP12.03□□□□□ -0.48
CALCOCO2-217ENST00000510356 KCNH5Q8NCM2 988 aa12.03□□□□□ -0.48
CALCOCO2-217ENST00000510356 DCAF11Q8TEB1 546 aa12.03□□□□□ -0.48
CALCOCO2-217ENST00000510356 FAM163AQ96GL9 167 aaPredicted RBP12.03□□□□□ -0.48
CALCOCO2-217ENST00000510356 CCDC7Q96M83 1385 aa12.03□□□□□ -0.48
CALCOCO2-217ENST00000510356 MAP3K9P80192 1104 aa12.02□□□□□ -0.49
CALCOCO2-217ENST00000510356 SLC27A3Q5K4L6 730 aa12.02□□□□□ -0.49
CALCOCO2-217ENST00000510356 PTCD2Q8WV60 388 aaKnown RBP12.02□□□□□ -0.49
CALCOCO2-217ENST00000510356 HMGB2P26583 209 aaKnown RBP12.01□□□□□ -0.49
CALCOCO2-217ENST00000510356 SRPK2P78362 688 aaKnown RBP12.01□□□□□ -0.49
CALCOCO2-217ENST00000510356 NBR1Q14596 966 aa12.01□□□□□ -0.49
CALCOCO2-217ENST00000510356 DOK7Q18PE1 504 aa12.01□□□□□ -0.49
CALCOCO2-217ENST00000510356 LCE2DQ5TA82 110 aaPredicted RBP12.01□□□□□ -0.49
CALCOCO2-217ENST00000510356 TFCP2L1Q9NZI6 479 aa12□□□□□ -0.49
CALCOCO2-217ENST00000510356 ATP10DQ9P241 1426 aa12□□□□□ -0.49
CALCOCO2-217ENST00000510356 SHANK3Q9BYB0 1731 aa12□□□□□ -0.49
CALCOCO2-217ENST00000510356 SNPHO15079 494 aa11.99□□□□□ -0.49
CALCOCO2-217ENST00000510356 ZNF827Q17R98 1081 aa11.99□□□□□ -0.49
CALCOCO2-217ENST00000510356 ARHGEF25Q86VW2 580 aa11.99□□□□□ -0.49
CALCOCO2-217ENST00000510356 ACSBG1Q96GR2 724 aa11.99□□□□□ -0.49
CALCOCO2-217ENST00000510356 AXIN2Q9Y2T1 843 aa11.99□□□□□ -0.49
CALCOCO2-217ENST00000510356 USP6P35125 1406 aa11.99□□□□□ -0.49
CALCOCO2-217ENST00000510356 PPIP5K1Q6PFW1 1433 aa11.99□□□□□ -0.49
CALCOCO2-217ENST00000510356 AKAP12Q02952 1782 aa11.99□□□□□ -0.49
CALCOCO2-217ENST00000510356 TNS2Q63HR2 1409 aa11.98□□□□□ -0.49
CALCOCO2-217ENST00000510356 TBC1D12O60347 775 aa11.98□□□□□ -0.49
CALCOCO2-217ENST00000510356 APLP1P51693 650 aa11.98□□□□□ -0.49
CALCOCO2-217ENST00000510356 NLGN2Q8NFZ4 835 aa11.98□□□□□ -0.49
CALCOCO2-217ENST00000510356 SLIT3O75094 1523 aa11.97□□□□□ -0.49
CALCOCO2-217ENST00000510356 CPSF1Q10570 1443 aaKnown RBP11.97□□□□□ -0.49
CALCOCO2-217ENST00000510356 YBX3P16989 372 aaKnown RBP eCLIP11.97□□□□□ -0.497e-12■□□□□ 11.1
CALCOCO2-217ENST00000510356 PCDHGA4Q9Y5G9 962 aa11.97□□□□□ -0.49
CALCOCO2-217ENST00000510356 CEP350Q5VT06 3117 aa11.97□□□□□ -0.49
CALCOCO2-217ENST00000510356 TOPAZ1Q8N9V7 1692 aa11.97□□□□□ -0.49
CALCOCO2-217ENST00000510356 PNPLA7Q6ZV29 1317 aa11.96□□□□□ -0.49
CALCOCO2-217ENST00000510356 RIMBP2O15034 1052 aa11.96□□□□□ -0.49
CALCOCO2-217ENST00000510356 ZNF710Q8N1W2 664 aa11.96□□□□□ -0.49
CALCOCO2-217ENST00000510356 LRRC4BQ9NT99 713 aa11.96□□□□□ -0.49
CALCOCO2-217ENST00000510356 IL2RBP14784 551 aa11.95□□□□□ -0.5
CALCOCO2-217ENST00000510356 CD2APQ9Y5K6 639 aa11.95□□□□□ -0.5
CALCOCO2-217ENST00000510356 PAPPAQ13219 1627 aa11.95□□□□□ -0.5
CALCOCO2-217ENST00000510356 NHSQ6T4R5 1651 aa11.94□□□□□ -0.5
CALCOCO2-217ENST00000510356 SPDYE16A6NNV3 312 aaPredicted RBP11.94□□□□□ -0.5
CALCOCO2-217ENST00000510356 PDIA6Q15084 440 aa11.94□□□□□ -0.5
CALCOCO2-217ENST00000510356 CABP1Q9NZU7 370 aa11.94□□□□□ -0.5
CALCOCO2-217ENST00000510356 SEMA3EO15041 775 aa11.93□□□□□ -0.5
CALCOCO2-217ENST00000510356 EVI5O60447 810 aa11.93□□□□□ -0.5
CALCOCO2-217ENST00000510356 ARSIQ5FYB1 569 aa11.93□□□□□ -0.5
CALCOCO2-217ENST00000510356 ZNF526Q8TF50 670 aaPredicted RBP11.93□□□□□ -0.5
CALCOCO2-217ENST00000510356 NLRP2Q9NX02 1062 aa11.93□□□□□ -0.5
CALCOCO2-217ENST00000510356 ARHGEF28Q8N1W1 1705 aaKnown RBP11.93□□□□□ -0.5
CALCOCO2-217ENST00000510356 WNK3Q9BYP7 1800 aa11.93□□□□□ -0.5
CALCOCO2-217ENST00000510356 TTC21AQ8NDW8 1320 aa11.92□□□□□ -0.5
CALCOCO2-217ENST00000510356 ABCC6O95255 1503 aa11.92□□□□□ -0.5
CALCOCO2-217ENST00000510356 GPR153Q6NV75 609 aa11.92□□□□□ -0.5
CALCOCO2-217ENST00000510356 KHSRPQ92945 711 aaKnown RBP eCLIP11.92□□□□□ -0.5
CALCOCO2-217ENST00000510356 ZSWIM6Q9HCJ5 1215 aa11.92□□□□□ -0.5
CALCOCO2-217ENST00000510356 COL18A1P39060 1754 aa11.92□□□□□ -0.5
CALCOCO2-217ENST00000510356 ADCY9O60503 1353 aa11.92□□□□□ -0.5
CALCOCO2-217ENST00000510356 CENPJQ9HC77 1338 aaPredicted RBP11.91□□□□□ -0.5
CALCOCO2-217ENST00000510356 TRPM1Q7Z4N2 1603 aa11.91□□□□□ -0.5
CALCOCO2-217ENST00000510356 FLAD1Q8NFF5 587 aa11.91□□□□□ -0.5
CALCOCO2-217ENST00000510356 TOMM70O94826 608 aa11.9□□□□□ -0.5
CALCOCO2-217ENST00000510356 TTC21BQ7Z4L5 1316 aa11.89□□□□□ -0.51
CALCOCO2-217ENST00000510356 COL24A1Q17RW2 1714 aa11.89□□□□□ -0.51
CALCOCO2-217ENST00000510356 QSER1Q2KHR3 1735 aa11.89□□□□□ -0.51
CALCOCO2-217ENST00000510356 DNAJC5GQ8N7S2 189 aa11.89□□□□□ -0.51
CALCOCO2-217ENST00000510356 ERBB3P21860 1342 aa11.88□□□□□ -0.51
CALCOCO2-217ENST00000510356 NUDT7P0C024 238 aa11.88□□□□□ -0.51
CALCOCO2-217ENST00000510356 EVC2Q86UK5 1308 aa11.87□□□□□ -0.51
CALCOCO2-217ENST00000510356 TESPA1A2RU30 521 aaPredicted RBP11.87□□□□□ -0.51
CALCOCO2-217ENST00000510356 PRELPP51888 382 aa11.87□□□□□ -0.51
CALCOCO2-217ENST00000510356 SYTL4Q96C24 671 aaPredicted RBP11.87□□□□□ -0.51
CALCOCO2-217ENST00000510356 CCNL1Q9UK58 526 aaPredicted RBP11.87□□□□□ -0.51
CALCOCO2-217ENST00000510356 BTAF1O14981 1849 aa11.86□□□□□ -0.51
CALCOCO2-217ENST00000510356 ZNF316A6NFI3 1004 aaPredicted RBP11.86□□□□□ -0.51
CALCOCO2-217ENST00000510356 COL23A1Q86Y22 540 aaPredicted RBP11.86□□□□□ -0.51
CALCOCO2-217ENST00000510356 TNS4Q8IZW8 715 aa11.86□□□□□ -0.51
CALCOCO2-217ENST00000510356 DDX54Q8TDD1 881 aaKnown RBP11.86□□□□□ -0.51
CALCOCO2-217ENST00000510356 ANKRD36BQ8N2N9 1353 aa11.85□□□□□ -0.51
CALCOCO2-217ENST00000510356 MLLT3P42568 568 aaPredicted RBP11.85□□□□□ -0.51
CALCOCO2-217ENST00000510356 PRIM1P49642 420 aaKnown RBP11.85□□□□□ -0.51
CALCOCO2-217ENST00000510356 ANKRD24Q8TF21 1146 aa11.85□□□□□ -0.51
CALCOCO2-217ENST00000510356 HOXB1P14653 301 aaPredicted RBP11.84□□□□□ -0.51
CALCOCO2-217ENST00000510356 PIK3C2AO00443 1686 aa11.84□□□□□ -0.51
CALCOCO2-217ENST00000510356 QRICH2Q9H0J4 1663 aa11.84□□□□□ -0.51
CALCOCO2-217ENST00000510356 USP47Q96K76 1375 aa11.83□□□□□ -0.52
CALCOCO2-217ENST00000510356 ST18O60284 1047 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms