RNA–Protein interactions for RNA: ENST00000509818.5

SEC24D-209, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-209ENST00000509818 RGPD5Q99666 1765 aa11.45□□□□□ -0.58
SEC24D-209ENST00000509818 SLC4A2P04920 1241 aa11.44□□□□□ -0.58
SEC24D-209ENST00000509818 RXRBP28702 533 aa11.44□□□□□ -0.58
SEC24D-209ENST00000509818 CCDC30Q5VVM6 783 aa11.44□□□□□ -0.58
SEC24D-209ENST00000509818 CABLES1Q8TDN4 633 aa11.44□□□□□ -0.58
SEC24D-209ENST00000509818 STK31Q9BXU1 1019 aa11.44□□□□□ -0.58
SEC24D-209ENST00000509818 CHMP4AQ9BY43 222 aa11.44□□□□□ -0.58
SEC24D-209ENST00000509818 LMO7Q8WWI1 1683 aa11.44□□□□□ -0.58
SEC24D-209ENST00000509818 CPDO75976 1380 aa11.44□□□□□ -0.58
SEC24D-209ENST00000509818 FAM161AQ3B820 660 aa11.44□□□□□ -0.58
SEC24D-209ENST00000509818 INTS3Q68E01 1043 aaKnown RBP11.44□□□□□ -0.58
SEC24D-209ENST00000509818 QTRT2Q9H974 415 aaKnown RBP11.44□□□□□ -0.58
SEC24D-209ENST00000509818 PDZRN3Q9UPQ7 1066 aa11.44□□□□□ -0.58
SEC24D-209ENST00000509818 COL18A1P39060 1754 aa11.43□□□□□ -0.58
SEC24D-209ENST00000509818 TEFQ10587 303 aa11.43□□□□□ -0.58
SEC24D-209ENST00000509818 FNBP4Q8N3X1 1017 aaPredicted RBP11.43□□□□□ -0.58
SEC24D-209ENST00000509818 LGR6Q9HBX8 967 aa11.43□□□□□ -0.58
SEC24D-209ENST00000509818 NLRP2Q9NX02 1062 aa11.43□□□□□ -0.58
SEC24D-209ENST00000509818 BCL9LQ86UU0 1499 aa11.43□□□□□ -0.58
SEC24D-209ENST00000509818 OVOS2A0A0G2JMS6 1433 aa11.43□□□□□ -0.58
SEC24D-209ENST00000509818 RGS12O14924 1447 aa11.43□□□□□ -0.58
SEC24D-209ENST00000509818 RNMTO43148 476 aaKnown RBP11.42□□□□□ -0.58
SEC24D-209ENST00000509818 CSB-PGBD3P0DP91 1061 aa11.42□□□□□ -0.58
SEC24D-209ENST00000509818 ANP32AP39687 249 aaKnown RBP11.42□□□□□ -0.58
SEC24D-209ENST00000509818 RAPGEF4Q8WZA2 1011 aa11.42□□□□□ -0.58
SEC24D-209ENST00000509818 USP21Q9UK80 565 aa11.42□□□□□ -0.58
SEC24D-209ENST00000509818 EP400Q96L91 3159 aa11.42□□□□□ -0.58
SEC24D-209ENST00000509818 CRYBG1Q9Y4K1 1723 aa11.42□□□□□ -0.58
SEC24D-209ENST00000509818 PLEKHG2Q9H7P9 1386 aa11.42□□□□□ -0.58
SEC24D-209ENST00000509818 TATP17735 454 aaPredicted RBP11.42□□□□□ -0.58
SEC24D-209ENST00000509818 DEKP35659 375 aaKnown RBP11.42□□□□□ -0.58
SEC24D-209ENST00000509818 SMC5Q8IY18 1101 aa11.42□□□□□ -0.58
SEC24D-209ENST00000509818 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.42□□□□□ -0.587e-7■■□□□ 14.2
SEC24D-209ENST00000509818 HOXB7P09629 217 aa11.41□□□□□ -0.58
SEC24D-209ENST00000509818 MPRIPQ6WCQ1 1025 aa11.41□□□□□ -0.58
SEC24D-209ENST00000509818 SPG7Q9UQ90 795 aa11.41□□□□□ -0.58
SEC24D-209ENST00000509818 CACNA1FO60840 1977 aa11.41□□□□□ -0.58
SEC24D-209ENST00000509818 ABCA3Q99758 1704 aa11.41□□□□□ -0.58
SEC24D-209ENST00000509818 FAM208AQ9UK61 1670 aaKnown RBP11.41□□□□□ -0.58
SEC24D-209ENST00000509818 BTBD11A6QL63 1104 aa11.4□□□□□ -0.58
SEC24D-209ENST00000509818 CHRNA2Q15822 529 aa11.4□□□□□ -0.58
SEC24D-209ENST00000509818 ATRNO75882 1429 aa11.4□□□□□ -0.58
SEC24D-209ENST00000509818 CCT4P50991 539 aaKnown RBP11.4□□□□□ -0.59
SEC24D-209ENST00000509818 EIF4A1P60842 406 aaKnown RBP11.4□□□□□ -0.59
SEC24D-209ENST00000509818 RBM6P78332 1123 aaKnown RBP11.4□□□□□ -0.59
SEC24D-209ENST00000509818 PRKCSHP14314 528 aaPredicted RBP11.39□□□□□ -0.59
SEC24D-209ENST00000509818 C8orf34Q49A92 452 aa11.39□□□□□ -0.59
SEC24D-209ENST00000509818 G2E3Q7L622 706 aa11.39□□□□□ -0.59
SEC24D-209ENST00000509818 GCC1Q96CN9 775 aa11.39□□□□□ -0.59
SEC24D-209ENST00000509818 SLIT2O94813 1529 aa11.39□□□□□ -0.59
SEC24D-209ENST00000509818 KDM3BQ7LBC6 1761 aa11.38□□□□□ -0.59
SEC24D-209ENST00000509818 FLIIQ13045 1269 aa11.38□□□□□ -0.59
SEC24D-209ENST00000509818 HDGFL1Q5TGJ6 251 aa11.38□□□□□ -0.59
SEC24D-209ENST00000509818 PRDM11Q9NQV5 511 aa11.38□□□□□ -0.59
SEC24D-209ENST00000509818 TRPC5Q9UL62 973 aaPredicted RBP11.38□□□□□ -0.59
SEC24D-209ENST00000509818 NOP58Q9Y2X3 529 aaKnown RBP11.38□□□□□ -0.59
SEC24D-209ENST00000509818 NUCB1Q02818 461 aa11.37□□□□□ -0.59
SEC24D-209ENST00000509818 RPAP2Q8IXW5 612 aaPredicted RBP11.37□□□□□ -0.59
SEC24D-209ENST00000509818 IFNL2Q8IZJ0 200 aa11.37□□□□□ -0.59
SEC24D-209ENST00000509818 UPF1Q92900 1129 aaKnown RBP eCLIP11.37□□□□□ -0.59
SEC24D-209ENST00000509818 C1orf115Q9H7X2 142 aa11.37□□□□□ -0.59
SEC24D-209ENST00000509818 VIRMAQ69YN4 1812 aaKnown RBP11.37□□□□□ -0.59
SEC24D-209ENST00000509818 FKBP5Q13451 457 aaPredicted RBP11.36□□□□□ -0.59
SEC24D-209ENST00000509818 NECTIN2Q92692 538 aa11.36□□□□□ -0.59
SEC24D-209ENST00000509818 IPO9Q96P70 1041 aaKnown RBP11.36□□□□□ -0.59
SEC24D-209ENST00000509818 ADAMTS7Q9UKP4 1686 aa11.36□□□□□ -0.59
SEC24D-209ENST00000509818 PLCH1Q4KWH8 1693 aa11.36□□□□□ -0.59
SEC24D-209ENST00000509818 GLI3P10071 1580 aa11.36□□□□□ -0.59
SEC24D-209ENST00000509818 HSP90AB1P08238 724 aaKnown RBP11.36□□□□□ -0.59
SEC24D-209ENST00000509818 PHKG2P15735 406 aa11.36□□□□□ -0.59
SEC24D-209ENST00000509818 SLC4A10Q6U841 1118 aa11.36□□□□□ -0.59
SEC24D-209ENST00000509818 F6X3S4 739 aa11.35□□□□□ -0.59
SEC24D-209ENST00000509818 KCNQ3O43525 872 aa11.35□□□□□ -0.59
SEC24D-209ENST00000509818 EIF2S2P20042 333 aaKnown RBP11.35□□□□□ -0.59
SEC24D-209ENST00000509818 NPM2Q86SE8 214 aaKnown RBP11.35□□□□□ -0.59
SEC24D-209ENST00000509818 CHD1LQ86WJ1 897 aa11.35□□□□□ -0.59
SEC24D-209ENST00000509818 UNC5CLQ8IV45 518 aa11.35□□□□□ -0.59
SEC24D-209ENST00000509818 SIRT2Q8IXJ6 389 aa11.35□□□□□ -0.59
SEC24D-209ENST00000509818 ANKRD44Q8N8A2 993 aa11.35□□□□□ -0.59
SEC24D-209ENST00000509818 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.35□□□□□ -0.59
SEC24D-209ENST00000509818 WDR17Q8IZU2 1322 aa11.35□□□□□ -0.59
SEC24D-209ENST00000509818 DCAF5Q96JK2 942 aa11.34□□□□□ -0.59
SEC24D-209ENST00000509818 GJD4Q96KN9 370 aaPredicted RBP11.34□□□□□ -0.59
SEC24D-209ENST00000509818 MEGF6O75095 1541 aa11.34□□□□□ -0.59
SEC24D-209ENST00000509818 HEG1Q9ULI3 1381 aa11.34□□□□□ -0.59
SEC24D-209ENST00000509818 SIPA1L3O60292 1781 aaPredicted RBP11.34□□□□□ -0.59
SEC24D-209ENST00000509818 GNAI3P08754 354 aa11.34□□□□□ -0.59
SEC24D-209ENST00000509818 ANKRD45Q5TZF3 282 aa11.34□□□□□ -0.59
SEC24D-209ENST00000509818 TOM1L2Q6ZVM7 507 aa11.34□□□□□ -0.59
SEC24D-209ENST00000509818 SLC52A2Q9HAB3 445 aa11.34□□□□□ -0.59
SEC24D-209ENST00000509818 SCN11AQ9UI33 1791 aa11.33□□□□□ -0.6
SEC24D-209ENST00000509818 GIGYF1O75420 1035 aaPredicted RBP11.33□□□□□ -0.6
SEC24D-209ENST00000509818 RTL5Q5HYW3 569 aaPredicted RBP11.33□□□□□ -0.6
SEC24D-209ENST00000509818 MEIS3Q99687 375 aa11.33□□□□□ -0.6
SEC24D-209ENST00000509818 DCTPP1Q9H773 170 aa11.33□□□□□ -0.6
SEC24D-209ENST00000509818 HMMRO75330 724 aa11.32□□□□□ -0.6
SEC24D-209ENST00000509818 EVA1CP58658 441 aa11.32□□□□□ -0.6
SEC24D-209ENST00000509818 CEP85Q6P2H3 762 aa11.32□□□□□ -0.6
SEC24D-209ENST00000509818 DDRGK1Q96HY6 314 aa11.32□□□□□ -0.6
SEC24D-209ENST00000509818 CARD10Q9BWT7 1032 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms