RNA–Protein interactions for RNA: ENST00000509093.5

COPS4-206, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2 BASIC

Gene COPS4, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-206ENST00000509093 ROBO1Q9Y6N7 1651 aa13.97□□□□□ -0.17
COPS4-206ENST00000509093 CAMTA1Q9Y6Y1 1673 aa13.97□□□□□ -0.17
COPS4-206ENST00000509093 HAP1P54257 671 aaPredicted RBP13.97□□□□□ -0.17
COPS4-206ENST00000509093 TWISTNBQ3B726 338 aaPredicted RBP13.97□□□□□ -0.17
COPS4-206ENST00000509093 LGR6Q9HBX8 967 aa13.97□□□□□ -0.17
COPS4-206ENST00000509093 NOB1Q9ULX3 412 aaKnown RBP13.97□□□□□ -0.17
COPS4-206ENST00000509093 HTATSF1O43719 755 aaKnown RBP13.96□□□□□ -0.17
COPS4-206ENST00000509093 LMO7Q8WWI1 1683 aa13.96□□□□□ -0.17
COPS4-206ENST00000509093 ZNF530Q6P9A1 599 aaPredicted RBP13.95□□□□□ -0.18
COPS4-206ENST00000509093 TRIM44Q96DX7 344 aaPredicted RBP13.95□□□□□ -0.18
COPS4-206ENST00000509093 PLEKHO1Q53GL0 409 aaPredicted RBP13.95□□□□□ -0.18
COPS4-206ENST00000509093 TSPYL4Q9UJ04 414 aa13.95□□□□□ -0.18
COPS4-206ENST00000509093 ZKSCAN2Q63HK3 967 aa13.94□□□□□ -0.18
COPS4-206ENST00000509093 ABCA3Q99758 1704 aa13.94□□□□□ -0.18
COPS4-206ENST00000509093 TRIM27P14373 513 aa13.94□□□□□ -0.18
COPS4-206ENST00000509093 MPRIPQ6WCQ1 1025 aa13.94□□□□□ -0.18
COPS4-206ENST00000509093 MRPL50Q8N5N7 158 aaKnown RBP13.94□□□□□ -0.18
COPS4-206ENST00000509093 LRRC37A3O60309 1634 aa13.94□□□□□ -0.18
COPS4-206ENST00000509093 FAM208AQ9UK61 1670 aaKnown RBP13.93□□□□□ -0.18
COPS4-206ENST00000509093 ALDH1L2Q3SY69 923 aa13.93□□□□□ -0.18
COPS4-206ENST00000509093 MEGF6O75095 1541 aa13.93□□□□□ -0.18
COPS4-206ENST00000509093 AMOTQ4VCS5 1084 aa13.92□□□□□ -0.18
COPS4-206ENST00000509093 AKAP4Q5JQC9 854 aa13.92□□□□□ -0.18
COPS4-206ENST00000509093 SPRYD3Q8NCJ5 442 aa13.92□□□□□ -0.18
COPS4-206ENST00000509093 CEMIPQ8WUJ3 1361 aa13.92□□□□□ -0.18
COPS4-206ENST00000509093 ABCC6O95255 1503 aa13.92□□□□□ -0.18
COPS4-206ENST00000509093 PIP4K2BP78356 416 aa13.92□□□□□ -0.18
COPS4-206ENST00000509093 ATF7IPQ6VMQ6 1270 aa13.92□□□□□ -0.18
COPS4-206ENST00000509093 PDZRN3Q9UPQ7 1066 aa13.92□□□□□ -0.18
COPS4-206ENST00000509093 TAF7Q15545 349 aaPredicted RBP13.91□□□□□ -0.18
COPS4-206ENST00000509093 DZIP1LQ8IYY4 767 aaKnown RBP13.91□□□□□ -0.18
COPS4-206ENST00000509093 RAPGEF4Q8WZA2 1011 aa13.91□□□□□ -0.18
COPS4-206ENST00000509093 ZNF428Q96B54 188 aa13.9□□□□□ -0.18
COPS4-206ENST00000509093 STRN4Q9NRL3 753 aa13.9□□□□□ -0.18
COPS4-206ENST00000509093 AHDC1Q5TGY3 1603 aaPredicted RBP13.9□□□□□ -0.18
COPS4-206ENST00000509093 RNMTO43148 476 aaKnown RBP13.9□□□□□ -0.18
COPS4-206ENST00000509093 TATP17735 454 aaPredicted RBP13.9□□□□□ -0.18
COPS4-206ENST00000509093 C1orf141Q5JVX7 400 aa13.9□□□□□ -0.18
COPS4-206ENST00000509093 C22orf23Q9BZE7 217 aa13.9□□□□□ -0.18
COPS4-206ENST00000509093 COL5A2P05997 1499 aaPredicted RBP13.9□□□□□ -0.18
COPS4-206ENST00000509093 KCNQ3O43525 872 aa13.89□□□□□ -0.19
COPS4-206ENST00000509093 BRPF1P55201 1214 aaPredicted RBP13.89□□□□□ -0.19
COPS4-206ENST00000509093 TOM1L2Q6ZVM7 507 aa13.89□□□□□ -0.19
COPS4-206ENST00000509093 FTSJ3Q8IY81 847 aaKnown RBP13.89□□□□□ -0.19
COPS4-206ENST00000509093 WDR17Q8IZU2 1322 aa13.89□□□□□ -0.19
COPS4-206ENST00000509093 LARP1Q6PKG0 1096 aaKnown RBP13.89□□□□□ -0.19
COPS4-206ENST00000509093 HSCBQ8IWL3 235 aa13.89□□□□□ -0.19
COPS4-206ENST00000509093 KIF16BQ96L93 1317 aa13.89□□□□□ -0.19
COPS4-206ENST00000509093 PTMSP20962 102 aa13.88□□□□□ -0.19
COPS4-206ENST00000509093 DDIT3P35638 169 aa13.88□□□□□ -0.19
COPS4-206ENST00000509093 MVPQ14764 893 aaKnown RBP13.88□□□□□ -0.19
COPS4-206ENST00000509093 KIAA1211Q6ZU35 1233 aa13.88□□□□□ -0.19
COPS4-206ENST00000509093 TMEM57Q8N5G2 664 aa13.88□□□□□ -0.19
COPS4-206ENST00000509093 PCDHB15Q9Y5E8 787 aa13.88□□□□□ -0.19
COPS4-206ENST00000509093 TERF1P54274 439 aa13.88□□□□□ -0.19
COPS4-206ENST00000509093 RWDD1Q9H446 243 aaPredicted RBP13.88□□□□□ -0.19
COPS4-206ENST00000509093 IPO8O15397 1037 aaKnown RBP13.87□□□□□ -0.19
COPS4-206ENST00000509093 SKOR2Q2VWA4 1001 aaPredicted RBP13.87□□□□□ -0.19
COPS4-206ENST00000509093 CCDC173Q0VFZ6 552 aa13.87□□□□□ -0.19
COPS4-206ENST00000509093 ITPRIPQ8IWB1 547 aa13.87□□□□□ -0.19
COPS4-206ENST00000509093 CIZ1Q9ULV3 898 aaPredicted RBP13.87□□□□□ -0.19
COPS4-206ENST00000509093 CYP27B1O15528 508 aa13.86□□□□□ -0.19
COPS4-206ENST00000509093 TOM1O60784 492 aa13.86□□□□□ -0.19
COPS4-206ENST00000509093 PHKG2P15735 406 aa13.86□□□□□ -0.19
COPS4-206ENST00000509093 EVA1CP58658 441 aa13.86□□□□□ -0.19
COPS4-206ENST00000509093 TEFQ10587 303 aa13.86□□□□□ -0.19
COPS4-206ENST00000509093 GAS2L3Q86XJ1 694 aa13.86□□□□□ -0.19
COPS4-206ENST00000509093 NECTIN2Q92692 538 aa13.86□□□□□ -0.19
COPS4-206ENST00000509093 BTG4Q9NY30 223 aa13.86□□□□□ -0.19
COPS4-206ENST00000509093 GBP4Q96PP9 640 aa13.85□□□□□ -0.19
COPS4-206ENST00000509093 SPG7Q9UQ90 795 aa13.85□□□□□ -0.19
COPS4-206ENST00000509093 KDM6AO15550 1401 aaPredicted RBP13.85□□□□□ -0.19
COPS4-206ENST00000509093 BTBD11A6QL63 1104 aa13.85□□□□□ -0.19
COPS4-206ENST00000509093 UBAP1LF5GYI3 381 aa13.85□□□□□ -0.19
COPS4-206ENST00000509093 OFD1O75665 1012 aa13.85□□□□□ -0.19
COPS4-206ENST00000509093 MFAP1P55081 439 aaKnown RBP13.85□□□□□ -0.19
COPS4-206ENST00000509093 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.85□□□□□ -0.19
COPS4-206ENST00000509093 ZSCAN30Q86W11 494 aa13.85□□□□□ -0.19
COPS4-206ENST00000509093 PPP1R9BQ96SB3 815 aa13.85□□□□□ -0.19
COPS4-206ENST00000509093 PHLPP1O60346 1717 aa13.84□□□□□ -0.19
COPS4-206ENST00000509093 G2E3Q7L622 706 aa13.84□□□□□ -0.19
COPS4-206ENST00000509093 MAP7D2Q96T17 732 aa13.84□□□□□ -0.19
COPS4-206ENST00000509093 CARD10Q9BWT7 1032 aa13.84□□□□□ -0.19
COPS4-206ENST00000509093 BABAM1Q9NWV8 329 aa13.84□□□□□ -0.19
COPS4-206ENST00000509093 PODXL2Q9NZ53 605 aa13.84□□□□□ -0.19
COPS4-206ENST00000509093 COL16A1Q07092 1604 aaPredicted RBP13.84□□□□□ -0.19
COPS4-206ENST00000509093 SLC4A2P04920 1241 aa13.84□□□□□ -0.19
COPS4-206ENST00000509093 EIF4A1P60842 406 aaKnown RBP13.84□□□□□ -0.19
COPS4-206ENST00000509093 AEBP2Q6ZN18 517 aaPredicted RBP13.84□□□□□ -0.19
COPS4-206ENST00000509093 ARHGAP45Q92619 1136 aa13.84□□□□□ -0.19
COPS4-206ENST00000509093 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.84□□□□□ -0.19
COPS4-206ENST00000509093 ADAMTS2O95450 1211 aa13.83□□□□□ -0.2
COPS4-206ENST00000509093 PRDM4Q9UKN5 801 aa13.83□□□□□ -0.2
COPS4-206ENST00000509093 OVOS2A0A0G2JMS6 1433 aa13.83□□□□□ -0.2
COPS4-206ENST00000509093 COL22A1Q8NFW1 1626 aaPredicted RBP13.83□□□□□ -0.2
COPS4-206ENST00000509093 SMC5Q8IY18 1101 aa13.83□□□□□ -0.2
COPS4-206ENST00000509093 IFNL2Q8IZJ0 200 aa13.83□□□□□ -0.2
COPS4-206ENST00000509093 TNPO1Q92973 898 aaKnown RBP13.83□□□□□ -0.2
COPS4-206ENST00000509093 SNX21Q969T3 373 aa13.83□□□□□ -0.2
COPS4-206ENST00000509093 ABCC4O15439 1325 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms