RNA–Protein interactions for RNA: ENST00000508652.5

TMA16-205, Transcript of translation machinery associated 16 homolog, humanhuman

TSL 2

Gene TMA16, Length 1,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMA16-205ENST00000508652 KDM6AO15550 1401 aaPredicted RBP18.4■□□□□ 0.54
TMA16-205ENST00000508652 EXOSC9Q06265 439 aaKnown RBP18.38■□□□□ 0.53
TMA16-205ENST00000508652 POTEAQ6S8J7 498 aa18.38■□□□□ 0.53
TMA16-205ENST00000508652 TMOD3Q9NYL9 352 aa18.38■□□□□ 0.53
TMA16-205ENST00000508652 PRIM1P49642 420 aaKnown RBP18.36■□□□□ 0.53
TMA16-205ENST00000508652 WNK3Q9BYP7 1800 aa18.35■□□□□ 0.53
TMA16-205ENST00000508652 CT47B1P0C2W7 299 aaPredicted RBP18.35■□□□□ 0.53
TMA16-205ENST00000508652 KRT27Q7Z3Y8 459 aa18.35■□□□□ 0.53
TMA16-205ENST00000508652 SYTL4Q96C24 671 aaPredicted RBP18.35■□□□□ 0.53
TMA16-205ENST00000508652 THSD7AQ9UPZ6 1657 aa18.34■□□□□ 0.53
TMA16-205ENST00000508652 TTC5Q8N0Z6 440 aa18.34■□□□□ 0.53
TMA16-205ENST00000508652 PIGBQ92521 554 aa18.34■□□□□ 0.53
TMA16-205ENST00000508652 LRRC37A3O60309 1634 aa18.34■□□□□ 0.53
TMA16-205ENST00000508652 EIF4A1P60842 406 aaKnown RBP18.33■□□□□ 0.52
TMA16-205ENST00000508652 ZNF790Q6PG37 636 aa18.33■□□□□ 0.52
TMA16-205ENST00000508652 C8orf58Q8NAV2 365 aa18.33■□□□□ 0.52
TMA16-205ENST00000508652 ACSBG1Q96GR2 724 aa18.33■□□□□ 0.52
TMA16-205ENST00000508652 RCAN3Q9UKA8 241 aa18.33■□□□□ 0.52
TMA16-205ENST00000508652 ADAMTS7Q9UKP4 1686 aa18.33■□□□□ 0.52
TMA16-205ENST00000508652 SHANK3Q9BYB0 1731 aa18.32■□□□□ 0.52
TMA16-205ENST00000508652 KCNQ3O43525 872 aa18.32■□□□□ 0.52
TMA16-205ENST00000508652 SLC39A6Q13433 755 aa18.32■□□□□ 0.52
TMA16-205ENST00000508652 ELL2O00472 640 aaPredicted RBP18.31■□□□□ 0.52
TMA16-205ENST00000508652 TWISTNBQ3B726 338 aaPredicted RBP18.31■□□□□ 0.52
TMA16-205ENST00000508652 FAM182BQ5T319 152 aa18.31■□□□□ 0.52
TMA16-205ENST00000508652 FAM196AQ6ZSG2 479 aa18.31■□□□□ 0.52
TMA16-205ENST00000508652 MRC1P22897 1456 aa18.31■□□□□ 0.52
TMA16-205ENST00000508652 SCN11AQ9UI33 1791 aa18.3■□□□□ 0.52
TMA16-205ENST00000508652 VAMP4O75379 141 aa18.3■□□□□ 0.52
TMA16-205ENST00000508652 TSPYL6Q8N831 410 aa18.3■□□□□ 0.52
TMA16-205ENST00000508652 SOS1Q07889 1333 aaPredicted RBP18.29■□□□□ 0.52
TMA16-205ENST00000508652 KRT24Q2M2I5 525 aa18.29■□□□□ 0.52
TMA16-205ENST00000508652 ZNF428Q96B54 188 aa18.29■□□□□ 0.52
TMA16-205ENST00000508652 FMNL2Q96PY5 1086 aa18.29■□□□□ 0.52
TMA16-205ENST00000508652 CHMP4AQ9BY43 222 aa18.29■□□□□ 0.52
TMA16-205ENST00000508652 BCL9O00512 1426 aa18.29■□□□□ 0.52
TMA16-205ENST00000508652 KCNQ2O43526 872 aa18.28■□□□□ 0.52
TMA16-205ENST00000508652 ATG3Q9NT62 314 aa18.28■□□□□ 0.52
TMA16-205ENST00000508652 ASAP1Q9ULH1 1129 aa18.28■□□□□ 0.52
TMA16-205ENST00000508652 RARSP54136 660 aaKnown RBP18.27■□□□□ 0.52
TMA16-205ENST00000508652 ZNF496Q96IT1 587 aaPredicted RBP18.27■□□□□ 0.52
TMA16-205ENST00000508652 GIGYF1O75420 1035 aaPredicted RBP18.26■□□□□ 0.51
TMA16-205ENST00000508652 HOXB7P09629 217 aa18.26■□□□□ 0.51
TMA16-205ENST00000508652 SNRPA1P09661 255 aaKnown RBP18.26■□□□□ 0.51
TMA16-205ENST00000508652 SMARCC1Q92922 1105 aaPredicted RBP18.26■□□□□ 0.51
TMA16-205ENST00000508652 PTCD1O75127 700 aaKnown RBP18.25■□□□□ 0.51
TMA16-205ENST00000508652 ALDH1L2Q3SY69 923 aa18.25■□□□□ 0.51
TMA16-205ENST00000508652 SUPT16HQ9Y5B9 1047 aaKnown RBP18.25■□□□□ 0.51
TMA16-205ENST00000508652 CCDC30Q5VVM6 783 aa18.24■□□□□ 0.51
TMA16-205ENST00000508652 RBM42Q9BTD8 480 aaKnown RBP18.24■□□□□ 0.51
TMA16-205ENST00000508652 BCL11BQ9C0K0 894 aaPredicted RBP18.24■□□□□ 0.51
TMA16-205ENST00000508652 HEG1Q9ULI3 1381 aa18.24■□□□□ 0.51
TMA16-205ENST00000508652 RGS12O14924 1447 aa18.23■□□□□ 0.51
TMA16-205ENST00000508652 EIF2S2P20042 333 aaKnown RBP18.22■□□□□ 0.51
TMA16-205ENST00000508652 VSIG10Q8N0Z9 540 aa18.22■□□□□ 0.51
TMA16-205ENST00000508652 SSH1Q8WYL5 1049 aa18.22■□□□□ 0.51
TMA16-205ENST00000508652 TEX13AQ9BXU3 409 aaPredicted RBP18.22■□□□□ 0.51
TMA16-205ENST00000508652 SMC4Q9NTJ3 1288 aa18.22■□□□□ 0.51
TMA16-205ENST00000508652 SIPA1L3O60292 1781 aaPredicted RBP18.22■□□□□ 0.51
TMA16-205ENST00000508652 TOGARAM1Q9Y4F4 1720 aa18.21■□□□□ 0.51
TMA16-205ENST00000508652 BCAR3O75815 825 aa18.21■□□□□ 0.51
TMA16-205ENST00000508652 HDGFL1Q5TGJ6 251 aa18.21■□□□□ 0.51
TMA16-205ENST00000508652 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.21■□□□□ 0.51
TMA16-205ENST00000508652 STK31Q9BXU1 1019 aa18.21■□□□□ 0.51
TMA16-205ENST00000508652 TRIM37O94972 964 aa18.2■□□□□ 0.5
TMA16-205ENST00000508652 PTF1AQ7RTS3 328 aa18.2■□□□□ 0.5
TMA16-205ENST00000508652 NECTIN2Q92692 538 aa18.2■□□□□ 0.5
TMA16-205ENST00000508652 BCL2L13Q9BXK5 485 aa18.2■□□□□ 0.5
TMA16-205ENST00000508652 KAT6BQ8WYB5 2073 aa18.19■□□□□ 0.5
TMA16-205ENST00000508652 VIRMAQ69YN4 1812 aaKnown RBP18.19■□□□□ 0.5
TMA16-205ENST00000508652 PRAMEF22A3QJZ6 481 aa18.19■□□□□ 0.5
TMA16-205ENST00000508652 TCERG1O14776 1098 aaKnown RBP18.19■□□□□ 0.5
TMA16-205ENST00000508652 MRPL50Q8N5N7 158 aaKnown RBP18.19■□□□□ 0.5
TMA16-205ENST00000508652 KDM3BQ7LBC6 1761 aa18.19■□□□□ 0.5
TMA16-205ENST00000508652 STARD3NLO95772 234 aa18.18■□□□□ 0.5
TMA16-205ENST00000508652 SLC4A2P04920 1241 aa18.18■□□□□ 0.5
TMA16-205ENST00000508652 BRPF1P55201 1214 aaPredicted RBP18.18■□□□□ 0.5
TMA16-205ENST00000508652 USP16Q9Y5T5 823 aa18.18■□□□□ 0.5
TMA16-205ENST00000508652 DOT1LQ8TEK3 1739 aa18.18■□□□□ 0.5
TMA16-205ENST00000508652 PALLDQ8WX93 1383 aa18.17■□□□□ 0.5
TMA16-205ENST00000508652 LOC102724428A0A0B4J2F2 783 aa18.17■□□□□ 0.5
TMA16-205ENST00000508652 IPO8O15397 1037 aaKnown RBP18.17■□□□□ 0.5
TMA16-205ENST00000508652 SIK1P57059 783 aa18.17■□□□□ 0.5
TMA16-205ENST00000508652 ITGB4P16144 1822 aa18.16■□□□□ 0.5
TMA16-205ENST00000508652 CANXP27824 592 aaKnown RBP18.16■□□□□ 0.5
TMA16-205ENST00000508652 ATP6V1AP38606 617 aa18.16■□□□□ 0.5
TMA16-205ENST00000508652 RRP1P56182 461 aaKnown RBP18.16■□□□□ 0.5
TMA16-205ENST00000508652 FRAT1Q92837 279 aaPredicted RBP18.16■□□□□ 0.5
TMA16-205ENST00000508652 DBF4Q9UBU7 674 aaPredicted RBP18.16■□□□□ 0.5
TMA16-205ENST00000508652 RNF123Q5XPI4 1314 aa18.16■□□□□ 0.5
TMA16-205ENST00000508652 BRWD3Q6RI45 1802 aa18.16■□□□□ 0.5
TMA16-205ENST00000508652 KCPQ6ZWJ8 1503 aa18.15■□□□□ 0.5
TMA16-205ENST00000508652 DNAJC10Q8IXB1 793 aa18.15■□□□□ 0.5
TMA16-205ENST00000508652 SLC4A9Q96Q91 983 aa18.15■□□□□ 0.5
TMA16-205ENST00000508652 NOB1Q9ULX3 412 aaKnown RBP18.15■□□□□ 0.5
TMA16-205ENST00000508652 KIF16BQ96L93 1317 aa18.15■□□□□ 0.5
TMA16-205ENST00000508652 DDX21Q9NR30 783 aaKnown RBP eCLIP18.14■□□□□ 0.49
TMA16-205ENST00000508652 HYPKQ9NX55 129 aa18.14■□□□□ 0.49
TMA16-205ENST00000508652 CHPF2Q9P2E5 772 aa18.14■□□□□ 0.49
TMA16-205ENST00000508652 PLIN1O60240 522 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms