RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 ERICH6Q7L0X2 663 aa6.16□□□□□ -1.42
UBE2D3-226ENST00000508635 SEPT12Q8IYM1 358 aa6.16□□□□□ -1.42
UBE2D3-226ENST00000508635 PHTF2Q8N3S3 785 aa6.16□□□□□ -1.42
UBE2D3-226ENST00000508635 ZNF784Q8NCA9 323 aaPredicted RBP6.16□□□□□ -1.42
UBE2D3-226ENST00000508635 CDCA7Q9BWT1 371 aaPredicted RBP6.16□□□□□ -1.42
UBE2D3-226ENST00000508635 COL25A1Q9BXS0 654 aaPredicted RBP6.16□□□□□ -1.42
UBE2D3-226ENST00000508635 PGPEP1Q9NXJ5 209 aa6.16□□□□□ -1.42
UBE2D3-226ENST00000508635 RAD54L2Q9Y4B4 1467 aa6.15□□□□□ -1.42
UBE2D3-226ENST00000508635 CUX1P39880 1505 aa6.15□□□□□ -1.42
UBE2D3-226ENST00000508635 CBLBQ13191 982 aa6.15□□□□□ -1.42
UBE2D3-226ENST00000508635 OXLD1Q5BKU9 147 aa6.15□□□□□ -1.42
UBE2D3-226ENST00000508635 TBC1D9Q6ZT07 1266 aa6.15□□□□□ -1.42
UBE2D3-226ENST00000508635 NANOS1Q8WY41 292 aaKnown RBP6.15□□□□□ -1.42
UBE2D3-226ENST00000508635 UCN2Q96RP3 112 aa6.15□□□□□ -1.42
UBE2D3-226ENST00000508635 DOLKQ9UPQ8 538 aa6.15□□□□□ -1.42
UBE2D3-226ENST00000508635 SOGA1O94964 1423 aa6.15□□□□□ -1.43
UBE2D3-226ENST00000508635 FGD5Q6ZNL6 1462 aa6.15□□□□□ -1.43
UBE2D3-226ENST00000508635 SCTRP47872 440 aa6.14□□□□□ -1.43
UBE2D3-226ENST00000508635 DEPDC4Q8N2C3 294 aa6.14□□□□□ -1.43
UBE2D3-226ENST00000508635 GPR161Q8N6U8 529 aaKnown RBP6.14□□□□□ -1.43
UBE2D3-226ENST00000508635 PLPP7Q8NBV4 271 aa6.14□□□□□ -1.43
UBE2D3-226ENST00000508635 LILRA1O75019 489 aa6.13□□□□□ -1.43
UBE2D3-226ENST00000508635 PROCP04070 461 aa6.13□□□□□ -1.43
UBE2D3-226ENST00000508635 ADD1P35611 737 aaKnown RBP6.13□□□□□ -1.43
UBE2D3-226ENST00000508635 DCAF5Q96JK2 942 aa6.13□□□□□ -1.43
UBE2D3-226ENST00000508635 ESF1Q9H501 851 aaKnown RBP6.13□□□□□ -1.43
UBE2D3-226ENST00000508635 ENAMQ9NRM1 1142 aa6.13□□□□□ -1.43
UBE2D3-226ENST00000508635 TFIP11Q9UBB9 837 aaKnown RBP6.13□□□□□ -1.43
UBE2D3-226ENST00000508635 TDRD9Q8NDG6 1382 aaKnown RBP6.13□□□□□ -1.43
UBE2D3-226ENST00000508635 UPP2O95045 317 aa6.12□□□□□ -1.43
UBE2D3-226ENST00000508635 MAP3K10Q02779 954 aa6.12□□□□□ -1.43
UBE2D3-226ENST00000508635 AGBL1Q96MI9 1066 aa6.12□□□□□ -1.43
UBE2D3-226ENST00000508635 KRTAP4-7Q9BYR0 210 aa6.12□□□□□ -1.43
UBE2D3-226ENST00000508635 PALM3A6NDB9 673 aaPredicted RBP6.11□□□□□ -1.43
UBE2D3-226ENST00000508635 USP17L5A8MUK1 530 aa6.11□□□□□ -1.43
UBE2D3-226ENST00000508635 ERVK-9P63128 1117 aa6.11□□□□□ -1.43
UBE2D3-226ENST00000508635 RELBQ01201 579 aa6.11□□□□□ -1.43
UBE2D3-226ENST00000508635 NCOA4Q13772 614 aa6.11□□□□□ -1.43
UBE2D3-226ENST00000508635 C6orf118Q5T5N4 469 aa6.11□□□□□ -1.43
UBE2D3-226ENST00000508635 CC2D2BQ6DHV5 1058 aa6.11□□□□□ -1.43
UBE2D3-226ENST00000508635 PPP1R12CQ9BZL4 782 aa6.11□□□□□ -1.43
UBE2D3-226ENST00000508635 C1orf115Q9H7X2 142 aa6.11□□□□□ -1.43
UBE2D3-226ENST00000508635 WDR97A6NE52 1622 aa6.1□□□□□ -1.43
UBE2D3-226ENST00000508635 ATP9BO43861 1147 aa6.1□□□□□ -1.43
UBE2D3-226ENST00000508635 RFX1P22670 979 aa6.1□□□□□ -1.43
UBE2D3-226ENST00000508635 MAP7D1Q3KQU3 841 aa6.1□□□□□ -1.43
UBE2D3-226ENST00000508635 CCDC125Q86Z20 511 aa6.1□□□□□ -1.43
UBE2D3-226ENST00000508635 MEIOBQ8N635 442 aa6.1□□□□□ -1.43
UBE2D3-226ENST00000508635 WHAMMQ8TF30 809 aa6.1□□□□□ -1.43
UBE2D3-226ENST00000508635 ZNF395Q9H8N7 513 aaPredicted RBP6.1□□□□□ -1.43
UBE2D3-226ENST00000508635 CHIC2Q9UKJ5 165 aa6.1□□□□□ -1.43
UBE2D3-226ENST00000508635 USP17L3A6NCW0 530 aa6.09□□□□□ -1.43
UBE2D3-226ENST00000508635 USP17L4A6NCW7 530 aa6.09□□□□□ -1.43
UBE2D3-226ENST00000508635 MYCP01106 439 aaPredicted RBP6.09□□□□□ -1.43
UBE2D3-226ENST00000508635 ADH1AP07327 375 aa6.09□□□□□ -1.43
UBE2D3-226ENST00000508635 BMP2P12643 396 aa6.09□□□□□ -1.43
UBE2D3-226ENST00000508635 LMOD1P29536 600 aaPredicted RBP6.09□□□□□ -1.43
UBE2D3-226ENST00000508635 USP4Q13107 963 aa6.09□□□□□ -1.43
UBE2D3-226ENST00000508635 EML3Q32P44 896 aa6.09□□□□□ -1.43
UBE2D3-226ENST00000508635 USP17L2Q6R6M4 530 aa6.09□□□□□ -1.43
UBE2D3-226ENST00000508635 Q6ZVU0 165 aa6.09□□□□□ -1.43
UBE2D3-226ENST00000508635 USP17L1Q7RTZ2 530 aa6.09□□□□□ -1.43
UBE2D3-226ENST00000508635 CCDC82Q8N4S0 544 aa6.09□□□□□ -1.43
UBE2D3-226ENST00000508635 NFATC2IPQ8NCF5 419 aa6.09□□□□□ -1.43
UBE2D3-226ENST00000508635 CCDC97Q96F63 343 aaPredicted RBP6.09□□□□□ -1.43
UBE2D3-226ENST00000508635 ARID3AQ99856 593 aa6.09□□□□□ -1.43
UBE2D3-226ENST00000508635 OSBPL3Q9H4L5 887 aa6.09□□□□□ -1.43
UBE2D3-226ENST00000508635 MAFBQ9Y5Q3 323 aaPredicted RBP6.09□□□□□ -1.43
UBE2D3-226ENST00000508635 RIMBP3CA6NJZ7 1639 aa6.09□□□□□ -1.43
UBE2D3-226ENST00000508635 RIMBP3BA6NNM3 1639 aa6.09□□□□□ -1.43
UBE2D3-226ENST00000508635 RIMBP3Q9UFD9 1639 aa6.09□□□□□ -1.43
UBE2D3-226ENST00000508635 ARHGEF11O15085 1522 aa6.09□□□□□ -1.44
UBE2D3-226ENST00000508635 GRIN2BQ13224 1484 aa6.09□□□□□ -1.44
UBE2D3-226ENST00000508635 SNAPC4Q5SXM2 1469 aa6.09□□□□□ -1.44
UBE2D3-226ENST00000508635 CHD1O14646 1710 aa6.08□□□□□ -1.44
UBE2D3-226ENST00000508635 STAU1O95793 577 aaKnown RBP6.08□□□□□ -1.44
UBE2D3-226ENST00000508635 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.08□□□□□ -1.44
UBE2D3-226ENST00000508635 CDCA8Q53HL2 280 aa6.08□□□□□ -1.44
UBE2D3-226ENST00000508635 LINC00528Q8N1L1 170 aa6.08□□□□□ -1.44
UBE2D3-226ENST00000508635 BEND7Q8N7W2 519 aaPredicted RBP6.08□□□□□ -1.44
UBE2D3-226ENST00000508635 RAB6BQ9NRW1 208 aa6.08□□□□□ -1.44
UBE2D3-226ENST00000508635 ABCA10Q8WWZ4 1543 aa6.08□□□□□ -1.44
UBE2D3-226ENST00000508635 MAGI1Q96QZ7 1491 aaPredicted RBP6.08□□□□□ -1.44
UBE2D3-226ENST00000508635 ATP5J2-PTCD1G3V325 749 aa6.07□□□□□ -1.44
UBE2D3-226ENST00000508635 ITGB2P05107 769 aa6.07□□□□□ -1.44
UBE2D3-226ENST00000508635 RNFT1Q5M7Z0 435 aa6.07□□□□□ -1.44
UBE2D3-226ENST00000508635 PODNQ7Z5L7 613 aa6.07□□□□□ -1.44
UBE2D3-226ENST00000508635 KDF1Q8NAX2 398 aaPredicted RBP6.07□□□□□ -1.44
UBE2D3-226ENST00000508635 CHMP7Q8WUX9 453 aaPredicted RBP6.07□□□□□ -1.44
UBE2D3-226ENST00000508635 TSEN34Q9BSV6 310 aaKnown RBP6.07□□□□□ -1.44
UBE2D3-226ENST00000508635 DNMT3LQ9UJW3 386 aa6.07□□□□□ -1.44
UBE2D3-226ENST00000508635 GAPVD1Q14C86 1478 aa6.07□□□□□ -1.44
UBE2D3-226ENST00000508635 WRNQ14191 1432 aaPredicted RBP eCLIP6.07□□□□□ -1.44
UBE2D3-226ENST00000508635 SOS2Q07890 1332 aaPredicted RBP6.06□□□□□ -1.44
UBE2D3-226ENST00000508635 MEN1O00255 615 aa6.06□□□□□ -1.44
UBE2D3-226ENST00000508635 PTGIRP43119 386 aa6.06□□□□□ -1.44
UBE2D3-226ENST00000508635 BAG6P46379 1132 aa6.06□□□□□ -1.44
UBE2D3-226ENST00000508635 PSME1Q06323 249 aa6.06□□□□□ -1.44
UBE2D3-226ENST00000508635 CFAP70Q5T0N1 1121 aa6.06□□□□□ -1.44
UBE2D3-226ENST00000508635 CYP2U1Q7Z449 544 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms