RNA–Protein interactions for RNA: ENST00000508502.5

SEC31A-227, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC31A, Length 3,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-227ENST00000508502 GOLGA6L22H0YM25 854 aa12.01□□□□□ -0.49
SEC31A-227ENST00000508502 GNAI3P08754 354 aa12.01□□□□□ -0.49
SEC31A-227ENST00000508502 OSBPL3Q9H4L5 887 aa12.01□□□□□ -0.49
SEC31A-227ENST00000508502 RRAGDQ9NQL2 400 aaPredicted RBP12□□□□□ -0.49
SEC31A-227ENST00000508502 ST18O60284 1047 aa12□□□□□ -0.49
SEC31A-227ENST00000508502 MAP3K5Q99683 1374 aa12□□□□□ -0.49
SEC31A-227ENST00000508502 PNMA6EA0A0J9YXQ4 647 aa12□□□□□ -0.49
SEC31A-227ENST00000508502 LRRCC1Q9C099 1032 aa12□□□□□ -0.49
SEC31A-227ENST00000508502 BAG4O95429 457 aaKnown RBP11.99□□□□□ -0.49
SEC31A-227ENST00000508502 TAF7Q15545 349 aaPredicted RBP11.99□□□□□ -0.49
SEC31A-227ENST00000508502 USHBP1Q8N6Y0 703 aa11.99□□□□□ -0.49
SEC31A-227ENST00000508502 ISY1Q9ULR0 285 aaKnown RBP11.99□□□□□ -0.49
SEC31A-227ENST00000508502 ATP8B2P98198 1209 aa11.99□□□□□ -0.49
SEC31A-227ENST00000508502 ANKARQ7Z5J8 1434 aa11.99□□□□□ -0.49
SEC31A-227ENST00000508502 CLEC17AQ6ZS10 378 aa11.98□□□□□ -0.49
SEC31A-227ENST00000508502 GAS2L3Q86XJ1 694 aa11.98□□□□□ -0.49
SEC31A-227ENST00000508502 LRRFIP2Q9Y608 721 aaKnown RBP11.98□□□□□ -0.49
SEC31A-227ENST00000508502 NUCB2P80303 420 aa11.98□□□□□ -0.49
SEC31A-227ENST00000508502 MX1P20591 662 aa11.98□□□□□ -0.49
SEC31A-227ENST00000508502 LRRC37A3O60309 1634 aa11.97□□□□□ -0.49
SEC31A-227ENST00000508502 NWD1Q149M9 1564 aa11.97□□□□□ -0.49
SEC31A-227ENST00000508502 AK9Q5TCS8 1911 aa11.97□□□□□ -0.49
SEC31A-227ENST00000508502 DDX49Q9Y6V7 483 aaKnown RBP11.97□□□□□ -0.49
SEC31A-227ENST00000508502 SALL3Q9BXA9 1300 aa11.97□□□□□ -0.49
SEC31A-227ENST00000508502 PKP1Q13835 747 aa11.97□□□□□ -0.49
SEC31A-227ENST00000508502 HDGFL1Q5TGJ6 251 aa11.97□□□□□ -0.49
SEC31A-227ENST00000508502 ZGPATQ8N5A5 531 aaKnown RBP11.97□□□□□ -0.49
SEC31A-227ENST00000508502 FAM208AQ9UK61 1670 aaKnown RBP11.97□□□□□ -0.49
SEC31A-227ENST00000508502 XRN1Q8IZH2 1706 aaKnown RBP11.96□□□□□ -0.49
SEC31A-227ENST00000508502 TRIM6-TRIM34B2RNG4 842 aa11.96□□□□□ -0.49
SEC31A-227ENST00000508502 MCTP1Q6DN14 999 aa11.96□□□□□ -0.49
SEC31A-227ENST00000508502 RILPL2Q969X0 211 aa11.96□□□□□ -0.49
SEC31A-227ENST00000508502 CWC22Q9HCG8 908 aaKnown RBP11.96□□□□□ -0.49
SEC31A-227ENST00000508502 UBTFL1P0CB47 393 aaPredicted RBP11.96□□□□□ -0.49
SEC31A-227ENST00000508502 USP44Q9H0E7 712 aa11.96□□□□□ -0.49
SEC31A-227ENST00000508502 IBTKQ9P2D0 1353 aaPredicted RBP11.96□□□□□ -0.5
SEC31A-227ENST00000508502 SOS1Q07889 1333 aaPredicted RBP11.96□□□□□ -0.5
SEC31A-227ENST00000508502 ESYT1Q9BSJ8 1104 aa11.96□□□□□ -0.5
SEC31A-227ENST00000508502 PHAXQ9H814 394 aaKnown RBP11.96□□□□□ -0.5
SEC31A-227ENST00000508502 BABAM1Q9NWV8 329 aa11.96□□□□□ -0.5
SEC31A-227ENST00000508502 CYP2E1P05181 493 aaPredicted RBP11.95□□□□□ -0.5
SEC31A-227ENST00000508502 ZBTB7CA1YPR0 619 aa11.95□□□□□ -0.5
SEC31A-227ENST00000508502 EIF2S2P20042 333 aaKnown RBP11.95□□□□□ -0.5
SEC31A-227ENST00000508502 NEK4P51957 841 aa11.95□□□□□ -0.5
SEC31A-227ENST00000508502 KLHL40Q2TBA0 621 aa11.95□□□□□ -0.5
SEC31A-227ENST00000508502 PHF8Q9UPP1 1060 aa11.95□□□□□ -0.5
SEC31A-227ENST00000508502 MARF1Q9Y4F3 1742 aaKnown RBP11.94□□□□□ -0.5
SEC31A-227ENST00000508502 RBM33Q96EV2 1170 aaKnown RBP11.94□□□□□ -0.5
SEC31A-227ENST00000508502 FER1L4A9Z1Z3 1794 aa11.94□□□□□ -0.5
SEC31A-227ENST00000508502 IL1RAPL2Q9NP60 686 aa11.94□□□□□ -0.5
SEC31A-227ENST00000508502 CHMLP26374 656 aa11.94□□□□□ -0.5
SEC31A-227ENST00000508502 ANO2Q9NQ90 1003 aa11.94□□□□□ -0.5
SEC31A-227ENST00000508502 NCLP19338 710 aaKnown RBP11.93□□□□□ -0.5
SEC31A-227ENST00000508502 MCCP23508 829 aa11.93□□□□□ -0.5
SEC31A-227ENST00000508502 IP6K1Q92551 441 aa11.93□□□□□ -0.5
SEC31A-227ENST00000508502 SRCIN1Q9C0H9 1055 aa11.93□□□□□ -0.5
SEC31A-227ENST00000508502 STAP2Q9UGK3 403 aa11.93□□□□□ -0.5
SEC31A-227ENST00000508502 NBPF6Q5VWK0 638 aa11.93□□□□□ -0.5
SEC31A-227ENST00000508502 NBPF4Q96M43 638 aa11.93□□□□□ -0.5
SEC31A-227ENST00000508502 LGR6Q9HBX8 967 aa11.93□□□□□ -0.5
SEC31A-227ENST00000508502 UNC5CLQ8IV45 518 aa11.92□□□□□ -0.5
SEC31A-227ENST00000508502 PXDNLA1KZ92 1463 aa11.92□□□□□ -0.5
SEC31A-227ENST00000508502 PALD1Q9ULE6 856 aa11.92□□□□□ -0.5
SEC31A-227ENST00000508502 CACNA1FO60840 1977 aa11.92□□□□□ -0.5
SEC31A-227ENST00000508502 SURF6O75683 361 aaKnown RBP11.92□□□□□ -0.5
SEC31A-227ENST00000508502 PPP1R42Q7Z4L9 355 aa11.92□□□□□ -0.5
SEC31A-227ENST00000508502 NUTM1Q86Y26 1132 aa11.92□□□□□ -0.5
SEC31A-227ENST00000508502 SSH3Q8TE77 659 aa11.92□□□□□ -0.5
SEC31A-227ENST00000508502 TMX3Q96JJ7 454 aa11.92□□□□□ -0.5
SEC31A-227ENST00000508502 LMBRD1Q9NUN5 540 aa11.92□□□□□ -0.5
SEC31A-227ENST00000508502 ZDHHC9Q9Y397 364 aa11.92□□□□□ -0.5
SEC31A-227ENST00000508502 EIF4A1P60842 406 aaKnown RBP11.91□□□□□ -0.5
SEC31A-227ENST00000508502 CEMIPQ8WUJ3 1361 aa11.91□□□□□ -0.5
SEC31A-227ENST00000508502 CAVIN1Q6NZI2 390 aaKnown RBP11.91□□□□□ -0.5
SEC31A-227ENST00000508502 NOL8Q76FK4 1167 aaKnown RBP11.91□□□□□ -0.5
SEC31A-227ENST00000508502 CHPF2Q9P2E5 772 aa11.91□□□□□ -0.5
SEC31A-227ENST00000508502 KCNQ3O43525 872 aa11.9□□□□□ -0.5
SEC31A-227ENST00000508502 PLEKHG5O94827 1062 aa11.9□□□□□ -0.5
SEC31A-227ENST00000508502 PSME1Q06323 249 aa11.9□□□□□ -0.5
SEC31A-227ENST00000508502 FOXD4L5Q5VV16 416 aaPredicted RBP11.9□□□□□ -0.5
SEC31A-227ENST00000508502 FOXD4L4Q8WXT5 416 aaPredicted RBP11.9□□□□□ -0.5
SEC31A-227ENST00000508502 TRIM44Q96DX7 344 aaPredicted RBP11.9□□□□□ -0.5
SEC31A-227ENST00000508502 USP54Q70EL1 1684 aa11.9□□□□□ -0.5
SEC31A-227ENST00000508502 PRPF40AO75400 957 aaKnown RBP11.9□□□□□ -0.5
SEC31A-227ENST00000508502 MCM2P49736 904 aa11.9□□□□□ -0.5
SEC31A-227ENST00000508502 ESCO1Q5FWF5 840 aa11.9□□□□□ -0.5
SEC31A-227ENST00000508502 SRGAP3O43295 1099 aa11.9□□□□□ -0.5
SEC31A-227ENST00000508502 RAB11FIP3O75154 756 aa11.9□□□□□ -0.5
SEC31A-227ENST00000508502 SETD1BQ9UPS6 1966 aaKnown RBP11.9□□□□□ -0.51
SEC31A-227ENST00000508502 AOX1Q06278 1338 aa11.89□□□□□ -0.51
SEC31A-227ENST00000508502 PI4KAP2A4QPH2 592 aa11.89□□□□□ -0.51
SEC31A-227ENST00000508502 MAP4K4O95819 1239 aaPredicted RBP11.89□□□□□ -0.51
SEC31A-227ENST00000508502 NBPF7P0C2Y1 421 aaPredicted RBP11.89□□□□□ -0.51
SEC31A-227ENST00000508502 TEFQ10587 303 aa11.89□□□□□ -0.51
SEC31A-227ENST00000508502 PI4KAP1Q8N8J0 262 aa11.89□□□□□ -0.51
SEC31A-227ENST00000508502 LRRC59Q96AG4 307 aaKnown RBP11.89□□□□□ -0.51
SEC31A-227ENST00000508502 LTN1O94822 1766 aa11.89□□□□□ -0.51
SEC31A-227ENST00000508502 TUBGCP6Q96RT7 1819 aa11.89□□□□□ -0.51
SEC31A-227ENST00000508502 ANXA1P04083 346 aa11.89□□□□□ -0.51
SEC31A-227ENST00000508502 NASPP49321 788 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms