RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 MTHFSP49914 203 aa22.11■■□□□ 1.13
LMNA-222ENST00000508500 SULT6B1Q6IMI4 303 aa22.11■■□□□ 1.13
LMNA-222ENST00000508500 MSH5O43196 834 aa22.1■■□□□ 1.13
LMNA-222ENST00000508500 CC2D1BQ5T0F9 858 aaKnown RBP22.1■■□□□ 1.13
LMNA-222ENST00000508500 ERVV-2B6SEH9 535 aa22.09■■□□□ 1.13
LMNA-222ENST00000508500 AMOTQ4VCS5 1084 aa22.09■■□□□ 1.13
LMNA-222ENST00000508500 MSL1Q68DK7 614 aa22.09■■□□□ 1.13
LMNA-222ENST00000508500 ZNF530Q6P9A1 599 aaPredicted RBP22.09■■□□□ 1.13
LMNA-222ENST00000508500 SLC4A9Q96Q91 983 aa22.09■■□□□ 1.13
LMNA-222ENST00000508500 DCAF5Q96JK2 942 aa22.08■■□□□ 1.13
LMNA-222ENST00000508500 GPR162Q16538 588 aa22.07■■□□□ 1.12
LMNA-222ENST00000508500 ATP6V1AP38606 617 aa22.06■■□□□ 1.12
LMNA-222ENST00000508500 KLHL34Q8N239 644 aa22.06■■□□□ 1.12
LMNA-222ENST00000508500 FLAD1Q8NFF5 587 aa22.06■■□□□ 1.12
LMNA-222ENST00000508500 AK7Q96M32 723 aa22.06■■□□□ 1.12
LMNA-222ENST00000508500 NPC1L1Q9UHC9 1359 aa22.05■■□□□ 1.12
LMNA-222ENST00000508500 HSP90AB1P08238 724 aaKnown RBP22.05■■□□□ 1.12
LMNA-222ENST00000508500 YBX3P16989 372 aaKnown RBP eCLIP22.05■■□□□ 1.12
LMNA-222ENST00000508500 COL3A1P02461 1466 aaPredicted RBP22.04■■□□□ 1.12
LMNA-222ENST00000508500 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.04■■□□□ 1.12
LMNA-222ENST00000508500 PHF14O94880 888 aa22.04■■□□□ 1.12
LMNA-222ENST00000508500 HMGB2P26583 209 aaKnown RBP22.03■■□□□ 1.12
LMNA-222ENST00000508500 C1QTNF8P60827 252 aa22.03■■□□□ 1.12
LMNA-222ENST00000508500 TJP1Q07157 1748 aa22.03■■□□□ 1.12
LMNA-222ENST00000508500 ADAMTS7Q9UKP4 1686 aa22.02■■□□□ 1.12
LMNA-222ENST00000508500 HMOX1P09601 288 aa22.02■■□□□ 1.12
LMNA-222ENST00000508500 SSFA2P28290 1259 aa22.01■■□□□ 1.11
LMNA-222ENST00000508500 CABP4P57796 275 aa22.01■■□□□ 1.11
LMNA-222ENST00000508500 CNGB1Q14028 1251 aaPredicted RBP22.01■■□□□ 1.11
LMNA-222ENST00000508500 NFATC2IPQ8NCF5 419 aa22.01■■□□□ 1.11
LMNA-222ENST00000508500 C4AP0C0L4 1744 aa22■■□□□ 1.11
LMNA-222ENST00000508500 CICQ96RK0 1608 aaPredicted RBP22■■□□□ 1.11
LMNA-222ENST00000508500 C1orf141Q5JVX7 400 aa22■■□□□ 1.11
LMNA-222ENST00000508500 RBM42Q9BTD8 480 aaKnown RBP22■■□□□ 1.11
LMNA-222ENST00000508500 GNPATO15228 680 aa21.99■■□□□ 1.11
LMNA-222ENST00000508500 DIAPH1O60610 1272 aaKnown RBP21.99■■□□□ 1.11
LMNA-222ENST00000508500 KIF13BQ9NQT8 1826 aa21.99■■□□□ 1.11
LMNA-222ENST00000508500 KIAA1551Q9HCM1 1747 aa21.98■■□□□ 1.11
LMNA-222ENST00000508500 LGR6Q9HBX8 967 aa21.98■■□□□ 1.11
LMNA-222ENST00000508500 CD2APQ9Y5K6 639 aa21.98■■□□□ 1.11
LMNA-222ENST00000508500 AKAP4Q5JQC9 854 aa21.97■■□□□ 1.11
LMNA-222ENST00000508500 MTHFSDQ2M296 383 aaKnown RBP21.96■■□□□ 1.11
LMNA-222ENST00000508500 MRC1P22897 1456 aa21.96■■□□□ 1.11
LMNA-222ENST00000508500 ADCY9O60503 1353 aa21.95■■□□□ 1.1
LMNA-222ENST00000508500 GRIN3BO60391 1043 aa21.94■■□□□ 1.1
LMNA-222ENST00000508500 PTCD1O75127 700 aaKnown RBP21.94■■□□□ 1.1
LMNA-222ENST00000508500 RC3H1Q5TC82 1133 aaKnown RBP21.94■■□□□ 1.1
LMNA-222ENST00000508500 PELP1Q8IZL8 1130 aaKnown RBP21.94■■□□□ 1.1
LMNA-222ENST00000508500 CNTNAP4Q9C0A0 1308 aa21.94■■□□□ 1.1
LMNA-222ENST00000508500 RNMTO43148 476 aaKnown RBP21.93■■□□□ 1.1
LMNA-222ENST00000508500 SIPA1L3O60292 1781 aaPredicted RBP21.93■■□□□ 1.1
LMNA-222ENST00000508500 UBR2Q8IWV8 1755 aa21.93■■□□□ 1.1
LMNA-222ENST00000508500 SLC52A2Q9HAB3 445 aa21.93■■□□□ 1.1
LMNA-222ENST00000508500 RTCBQ9Y3I0 505 aaKnown RBP21.92■■□□□ 1.1
LMNA-222ENST00000508500 RPS6KA4O75676 772 aa21.91■■□□□ 1.1
LMNA-222ENST00000508500 ARHGEF1Q92888 912 aaKnown RBP21.91■■□□□ 1.1
LMNA-222ENST00000508500 CEP350Q5VT06 3117 aa21.91■■□□□ 1.1
LMNA-222ENST00000508500 N4BP2Q86UW6 1770 aaPredicted RBP21.9■■□□□ 1.1
LMNA-222ENST00000508500 SENP3-EIF4A1A0A087X0R7 540 aa21.9■■□□□ 1.1
LMNA-222ENST00000508500 TRAPPC3LQ5T215 181 aa21.9■■□□□ 1.1
LMNA-222ENST00000508500 KCPQ6ZWJ8 1503 aa21.9■■□□□ 1.1
LMNA-222ENST00000508500 GIGYF1O75420 1035 aaPredicted RBP21.89■■□□□ 1.09
LMNA-222ENST00000508500 ATP10DQ9P241 1426 aa21.89■■□□□ 1.09
LMNA-222ENST00000508500 BRCA1P38398 1863 aaKnown RBP21.88■■□□□ 1.09
LMNA-222ENST00000508500 U2SURPO15042 1029 aaKnown RBP21.88■■□□□ 1.09
LMNA-222ENST00000508500 CRKLP46109 303 aaKnown RBP21.88■■□□□ 1.09
LMNA-222ENST00000508500 SLC39A6Q13433 755 aa21.88■■□□□ 1.09
LMNA-222ENST00000508500 GYS1P13807 737 aa21.87■■□□□ 1.09
LMNA-222ENST00000508500 MMP10P09238 476 aa21.86■■□□□ 1.09
LMNA-222ENST00000508500 ADRA2BP18089 450 aa21.86■■□□□ 1.09
LMNA-222ENST00000508500 INTS5Q6P9B9 1019 aaKnown RBP21.86■■□□□ 1.09
LMNA-222ENST00000508500 PPP2R1AP30153 589 aa21.85■■□□□ 1.09
LMNA-222ENST00000508500 DNAJC10Q8IXB1 793 aa21.85■■□□□ 1.09
LMNA-222ENST00000508500 IL17REQ8NFR9 667 aa21.84■■□□□ 1.09
LMNA-222ENST00000508500 NLGN1Q8N2Q7 840 aa21.83■■□□□ 1.09
LMNA-222ENST00000508500 PHACTR3Q96KR7 559 aa21.83■■□□□ 1.09
LMNA-222ENST00000508500 RFC4P35249 363 aa21.82■■□□□ 1.08
LMNA-222ENST00000508500 RSPH6AQ9H0K4 717 aa21.82■■□□□ 1.08
LMNA-222ENST00000508500 SRP68Q9UHB9 627 aaKnown RBP21.82■■□□□ 1.08
LMNA-222ENST00000508500 WWC3Q9ULE0 1092 aa21.82■■□□□ 1.08
LMNA-222ENST00000508500 PXDNLA1KZ92 1463 aa21.82■■□□□ 1.08
LMNA-222ENST00000508500 AFDNP55196 1824 aaKnown RBP21.81■■□□□ 1.08
LMNA-222ENST00000508500 CYP19A1P11511 503 aaPredicted RBP21.81■■□□□ 1.08
LMNA-222ENST00000508500 DLG5Q8TDM6 1919 aa21.8■■□□□ 1.08
LMNA-222ENST00000508500 C10orf71Q711Q0 1435 aa21.8■■□□□ 1.08
LMNA-222ENST00000508500 USP42Q9H9J4 1324 aaKnown RBP21.8■■□□□ 1.08
LMNA-222ENST00000508500 GNAT3A8MTJ3 354 aa21.79■■□□□ 1.08
LMNA-222ENST00000508500 PRKAR2BP31323 418 aa21.79■■□□□ 1.08
LMNA-222ENST00000508500 GAS2L2Q8NHY3 880 aa21.79■■□□□ 1.08
LMNA-222ENST00000508500 FKBP8Q14318 412 aa21.78■■□□□ 1.08
LMNA-222ENST00000508500 CFAP53Q96M91 514 aa21.78■■□□□ 1.08
LMNA-222ENST00000508500 CCDC87Q9NVE4 849 aa21.78■■□□□ 1.08
LMNA-222ENST00000508500 ARFGEF1Q9Y6D6 1849 aa21.78■■□□□ 1.08
LMNA-222ENST00000508500 SOS1Q07889 1333 aaPredicted RBP21.77■■□□□ 1.07
LMNA-222ENST00000508500 CEMIPQ8WUJ3 1361 aa21.76■■□□□ 1.07
LMNA-222ENST00000508500 ZBTB1Q9Y2K1 713 aa21.76■■□□□ 1.07
LMNA-222ENST00000508500 DDR1Q08345 913 aa21.75■■□□□ 1.07
LMNA-222ENST00000508500 VSIG10Q8N0Z9 540 aa21.75■■□□□ 1.07
LMNA-222ENST00000508500 A0A0G2JLW4 131 aa21.74■■□□□ 1.07
LMNA-222ENST00000508500 ZNF496Q96IT1 587 aaPredicted RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms