RNA–Protein interactions for RNA: ENST00000505831.1

SUDS3P1-201, Transcript of SDS3 homolog, SIN3A corepressor complex component pseudogene 1, humanhuman

BASIC

Gene SUDS3P1, Length 966 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3P1-201ENST00000505831 NLGN2Q8NFZ4 835 aa30.3■■■□□ 2.44
SUDS3P1-201ENST00000505831 AK7Q96M32 723 aa30.3■■■□□ 2.44
SUDS3P1-201ENST00000505831 HSP90AB1P08238 724 aaKnown RBP30.29■■■□□ 2.44
SUDS3P1-201ENST00000505831 MSL1Q68DK7 614 aa30.29■■■□□ 2.44
SUDS3P1-201ENST00000505831 COL5A3P25940 1745 aaPredicted RBP30.29■■■□□ 2.44
SUDS3P1-201ENST00000505831 MYH14Q7Z406 1995 aaKnown RBP30.28■■■□□ 2.44
SUDS3P1-201ENST00000505831 KLHL34Q8N239 644 aa30.28■■■□□ 2.44
SUDS3P1-201ENST00000505831 KDM6AO15550 1401 aaPredicted RBP30.28■■■□□ 2.44
SUDS3P1-201ENST00000505831 SMIM5Q71RC9 77 aa30.27■■■□□ 2.44
SUDS3P1-201ENST00000505831 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.26■■■□□ 2.43
SUDS3P1-201ENST00000505831 ATP6V1AP38606 617 aa30.26■■■□□ 2.43
SUDS3P1-201ENST00000505831 GPR162Q16538 588 aa30.26■■■□□ 2.43
SUDS3P1-201ENST00000505831 SULT6B1Q6IMI4 303 aa30.26■■■□□ 2.43
SUDS3P1-201ENST00000505831 SSFA2P28290 1259 aa30.25■■■□□ 2.43
SUDS3P1-201ENST00000505831 ZNF530Q6P9A1 599 aaPredicted RBP30.25■■■□□ 2.43
SUDS3P1-201ENST00000505831 SLC4A9Q96Q91 983 aa30.24■■■□□ 2.43
SUDS3P1-201ENST00000505831 MTHFSP49914 203 aa30.22■■■□□ 2.43
SUDS3P1-201ENST00000505831 ZNF784Q8NCA9 323 aaPredicted RBP30.22■■■□□ 2.43
SUDS3P1-201ENST00000505831 PHF14O94880 888 aa30.21■■■□□ 2.43
SUDS3P1-201ENST00000505831 CD2APQ9Y5K6 639 aa30.21■■■□□ 2.43
SUDS3P1-201ENST00000505831 GNPATO15228 680 aa30.18■■■□□ 2.42
SUDS3P1-201ENST00000505831 CABP4P57796 275 aa30.18■■■□□ 2.42
SUDS3P1-201ENST00000505831 C1orf141Q5JVX7 400 aa30.17■■■□□ 2.42
SUDS3P1-201ENST00000505831 YBX3P16989 372 aaKnown RBP eCLIP30.16■■■□□ 2.42
SUDS3P1-201ENST00000505831 RC3H1Q5TC82 1133 aaKnown RBP30.16■■■□□ 2.42
SUDS3P1-201ENST00000505831 NPC1L1Q9UHC9 1359 aa30.15■■■□□ 2.42
SUDS3P1-201ENST00000505831 KIF13BQ9NQT8 1826 aa30.15■■■□□ 2.42
SUDS3P1-201ENST00000505831 CICQ96RK0 1608 aaPredicted RBP30.15■■■□□ 2.42
SUDS3P1-201ENST00000505831 NFATC2IPQ8NCF5 419 aa30.15■■■□□ 2.42
SUDS3P1-201ENST00000505831 RBM42Q9BTD8 480 aaKnown RBP30.15■■■□□ 2.42
SUDS3P1-201ENST00000505831 CC2D1BQ5T0F9 858 aaKnown RBP30.13■■■□□ 2.41
SUDS3P1-201ENST00000505831 PELP1Q8IZL8 1130 aaKnown RBP30.13■■■□□ 2.41
SUDS3P1-201ENST00000505831 TJP1Q07157 1748 aa30.13■■■□□ 2.41
SUDS3P1-201ENST00000505831 ADAMTS7Q9UKP4 1686 aa30.12■■■□□ 2.41
SUDS3P1-201ENST00000505831 C4AP0C0L4 1744 aa30.12■■■□□ 2.41
SUDS3P1-201ENST00000505831 CNTNAP4Q9C0A0 1308 aa30.12■■■□□ 2.41
SUDS3P1-201ENST00000505831 GRIN3BO60391 1043 aa30.11■■■□□ 2.41
SUDS3P1-201ENST00000505831 AKAP4Q5JQC9 854 aa30.11■■■□□ 2.41
SUDS3P1-201ENST00000505831 TRAPPC3LQ5T215 181 aa30.1■■■□□ 2.41
SUDS3P1-201ENST00000505831 RTCBQ9Y3I0 505 aaKnown RBP30.1■■■□□ 2.41
SUDS3P1-201ENST00000505831 DIAPH1O60610 1272 aaKnown RBP30.08■■■□□ 2.41
SUDS3P1-201ENST00000505831 RPS6KA4O75676 772 aa30.08■■■□□ 2.41
SUDS3P1-201ENST00000505831 HMOX1P09601 288 aa30.08■■■□□ 2.41
SUDS3P1-201ENST00000505831 COL3A1P02461 1466 aaPredicted RBP30.07■■■□□ 2.4
SUDS3P1-201ENST00000505831 ADRA2BP18089 450 aa30.07■■■□□ 2.4
SUDS3P1-201ENST00000505831 ARHGEF1Q92888 912 aaKnown RBP30.07■■■□□ 2.4
SUDS3P1-201ENST00000505831 LGR6Q9HBX8 967 aa30.07■■■□□ 2.4
SUDS3P1-201ENST00000505831 KIAA1551Q9HCM1 1747 aa30.07■■■□□ 2.4
SUDS3P1-201ENST00000505831 PTCD1O75127 700 aaKnown RBP30.06■■■□□ 2.4
SUDS3P1-201ENST00000505831 MRC1P22897 1456 aa30.06■■■□□ 2.4
SUDS3P1-201ENST00000505831 MTHFSDQ2M296 383 aaKnown RBP30.03■■■□□ 2.4
SUDS3P1-201ENST00000505831 NLGN1Q8N2Q7 840 aa30.03■■■□□ 2.4
SUDS3P1-201ENST00000505831 SLC52A2Q9HAB3 445 aa30.03■■■□□ 2.4
SUDS3P1-201ENST00000505831 N4BP2Q86UW6 1770 aaPredicted RBP30.03■■■□□ 2.4
SUDS3P1-201ENST00000505831 RNMTO43148 476 aaKnown RBP30.02■■■□□ 2.4
SUDS3P1-201ENST00000505831 MMP10P09238 476 aa30.02■■■□□ 2.4
SUDS3P1-201ENST00000505831 GYS1P13807 737 aa30.01■■■□□ 2.39
SUDS3P1-201ENST00000505831 UBR2Q8IWV8 1755 aa30■■■□□ 2.39
SUDS3P1-201ENST00000505831 CRKLP46109 303 aaKnown RBP30■■■□□ 2.39
SUDS3P1-201ENST00000505831 BRCA1P38398 1863 aaKnown RBP29.99■■■□□ 2.39
SUDS3P1-201ENST00000505831 RFC4P35249 363 aa29.98■■■□□ 2.39
SUDS3P1-201ENST00000505831 SIPA1L3O60292 1781 aaPredicted RBP29.98■■■□□ 2.39
SUDS3P1-201ENST00000505831 INTS5Q6P9B9 1019 aaKnown RBP29.97■■■□□ 2.39
SUDS3P1-201ENST00000505831 KCPQ6ZWJ8 1503 aa29.96■■■□□ 2.39
SUDS3P1-201ENST00000505831 SLC39A6Q13433 755 aa29.93■■■□□ 2.38
SUDS3P1-201ENST00000505831 CNGB1Q14028 1251 aaPredicted RBP29.93■■■□□ 2.38
SUDS3P1-201ENST00000505831 DNAJC10Q8IXB1 793 aa29.93■■■□□ 2.38
SUDS3P1-201ENST00000505831 C10orf71Q711Q0 1435 aa29.92■■■□□ 2.38
SUDS3P1-201ENST00000505831 PXDNLA1KZ92 1463 aa29.92■■■□□ 2.38
SUDS3P1-201ENST00000505831 TGFB2P61812 414 aa29.91■■■□□ 2.38
SUDS3P1-201ENST00000505831 U2SURPO15042 1029 aaKnown RBP29.9■■■□□ 2.38
SUDS3P1-201ENST00000505831 CYP19A1P11511 503 aaPredicted RBP29.9■■■□□ 2.38
SUDS3P1-201ENST00000505831 USP42Q9H9J4 1324 aaKnown RBP29.9■■■□□ 2.38
SUDS3P1-201ENST00000505831 CCDC87Q9NVE4 849 aa29.89■■■□□ 2.38
SUDS3P1-201ENST00000505831 SRP68Q9UHB9 627 aaKnown RBP29.89■■■□□ 2.38
SUDS3P1-201ENST00000505831 AFDNP55196 1824 aaKnown RBP29.88■■■□□ 2.37
SUDS3P1-201ENST00000505831 ARFGEF1Q9Y6D6 1849 aa29.88■■■□□ 2.37
SUDS3P1-201ENST00000505831 C1QTNF8P60827 252 aa29.88■■■□□ 2.37
SUDS3P1-201ENST00000505831 IL17REQ8NFR9 667 aa29.88■■■□□ 2.37
SUDS3P1-201ENST00000505831 WWC3Q9ULE0 1092 aa29.88■■■□□ 2.37
SUDS3P1-201ENST00000505831 VSIG10Q8N0Z9 540 aa29.87■■■□□ 2.37
SUDS3P1-201ENST00000505831 PARP3Q9Y6F1 533 aa29.87■■■□□ 2.37
SUDS3P1-201ENST00000505831 ADCY9O60503 1353 aa29.87■■■□□ 2.37
SUDS3P1-201ENST00000505831 FKBP8Q14318 412 aa29.86■■■□□ 2.37
SUDS3P1-201ENST00000505831 A0A0G2JLW4 131 aa29.85■■■□□ 2.37
SUDS3P1-201ENST00000505831 GAS2L2Q8NHY3 880 aa29.85■■■□□ 2.37
SUDS3P1-201ENST00000505831 SOS1Q07889 1333 aaPredicted RBP29.85■■■□□ 2.37
SUDS3P1-201ENST00000505831 GNAT3A8MTJ3 354 aa29.84■■■□□ 2.37
SUDS3P1-201ENST00000505831 TM4SF1P30408 202 aa29.84■■■□□ 2.37
SUDS3P1-201ENST00000505831 ATP10DQ9P241 1426 aa29.83■■■□□ 2.37
SUDS3P1-201ENST00000505831 PHACTR3Q96KR7 559 aa29.83■■■□□ 2.37
SUDS3P1-201ENST00000505831 PPP2R1AP30153 589 aa29.82■■■□□ 2.36
SUDS3P1-201ENST00000505831 DDR1Q08345 913 aa29.82■■■□□ 2.36
SUDS3P1-201ENST00000505831 DPEP1P16444 411 aa29.81■■■□□ 2.36
SUDS3P1-201ENST00000505831 KCNA3P22001 575 aa29.81■■■□□ 2.36
SUDS3P1-201ENST00000505831 CFAP53Q96M91 514 aa29.81■■■□□ 2.36
SUDS3P1-201ENST00000505831 RSPH6AQ9H0K4 717 aa29.81■■■□□ 2.36
SUDS3P1-201ENST00000505831 NRXN2Q9P2S2 1712 aa29.8■■■□□ 2.36
SUDS3P1-201ENST00000505831 GIGYF1O75420 1035 aaPredicted RBP29.8■■■□□ 2.36
SUDS3P1-201ENST00000505831 CEMIPQ8WUJ3 1361 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms