RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 IL1RAPL2Q9NP60 686 aa9.38□□□□□ -0.91
ATP2C1-208ENST00000504948 KIF1AQ12756 1690 aa9.38□□□□□ -0.91
ATP2C1-208ENST00000504948 NRKQ7Z2Y5 1582 aa9.38□□□□□ -0.91
ATP2C1-208ENST00000504948 HSP90AA4PQ58FG1 418 aa9.37□□□□□ -0.91
ATP2C1-208ENST00000504948 TBC1D9Q6ZT07 1266 aa9.37□□□□□ -0.91
ATP2C1-208ENST00000504948 RNF216Q9NWF9 866 aaPredicted RBP9.37□□□□□ -0.91
ATP2C1-208ENST00000504948 SPAG9O60271 1321 aaKnown RBP9.37□□□□□ -0.91
ATP2C1-208ENST00000504948 SPATA31E1Q6ZUB1 1445 aa9.37□□□□□ -0.91
ATP2C1-208ENST00000504948 SMC2O95347 1197 aa9.37□□□□□ -0.91
ATP2C1-208ENST00000504948 RARSP54136 660 aaKnown RBP9.37□□□□□ -0.91
ATP2C1-208ENST00000504948 FAM193AP78312 1265 aa9.37□□□□□ -0.91
ATP2C1-208ENST00000504948 PDE3AQ14432 1141 aa9.37□□□□□ -0.91
ATP2C1-208ENST00000504948 RABEP2Q9H5N1 569 aa9.37□□□□□ -0.91
ATP2C1-208ENST00000504948 EXOC6BQ9Y2D4 811 aa9.37□□□□□ -0.91
ATP2C1-208ENST00000504948 MST1RQ04912 1400 aa9.37□□□□□ -0.91
ATP2C1-208ENST00000504948 REC8O95072 547 aa9.37□□□□□ -0.91
ATP2C1-208ENST00000504948 CD2BP2O95400 341 aaKnown RBP9.37□□□□□ -0.91
ATP2C1-208ENST00000504948 TEX35Q5T0J7 233 aa9.37□□□□□ -0.91
ATP2C1-208ENST00000504948 ISM2Q6H9L7 571 aa9.37□□□□□ -0.91
ATP2C1-208ENST00000504948 GOLGA6L1Q8N7Z2 621 aa9.37□□□□□ -0.91
ATP2C1-208ENST00000504948 NRAPQ86VF7 1730 aa9.37□□□□□ -0.91
ATP2C1-208ENST00000504948 NAA30Q147X3 362 aaPredicted RBP9.36□□□□□ -0.91
ATP2C1-208ENST00000504948 INTS3Q68E01 1043 aaKnown RBP9.36□□□□□ -0.91
ATP2C1-208ENST00000504948 TCEANC2Q96MN5 208 aa9.36□□□□□ -0.91
ATP2C1-208ENST00000504948 ZNF330Q9Y3S2 320 aaPredicted RBP9.36□□□□□ -0.91
ATP2C1-208ENST00000504948 CFAP65Q6ZU64 1925 aaKnown RBP9.35□□□□□ -0.91
ATP2C1-208ENST00000504948 TNRQ92752 1358 aa9.35□□□□□ -0.91
ATP2C1-208ENST00000504948 KLHL40Q2TBA0 621 aa9.35□□□□□ -0.91
ATP2C1-208ENST00000504948 MEX3CQ5U5Q3 659 aaKnown RBP9.35□□□□□ -0.91
ATP2C1-208ENST00000504948 NGEFQ8N5V2 710 aa9.35□□□□□ -0.91
ATP2C1-208ENST00000504948 RUNDC1Q96C34 613 aa9.35□□□□□ -0.91
ATP2C1-208ENST00000504948 MED1Q15648 1581 aaPredicted RBP9.35□□□□□ -0.91
ATP2C1-208ENST00000504948 DCTN1Q14203 1278 aa9.35□□□□□ -0.91
ATP2C1-208ENST00000504948 PLCD4Q9BRC7 762 aa9.35□□□□□ -0.91
ATP2C1-208ENST00000504948 DCCP43146 1447 aa9.35□□□□□ -0.91
ATP2C1-208ENST00000504948 PLEKHH1Q9ULM0 1364 aa9.35□□□□□ -0.91
ATP2C1-208ENST00000504948 RIOK3O14730 519 aaKnown RBP9.35□□□□□ -0.91
ATP2C1-208ENST00000504948 MBD3O95983 291 aa9.35□□□□□ -0.91
ATP2C1-208ENST00000504948 ATP2B1P20020 1258 aa9.35□□□□□ -0.91
ATP2C1-208ENST00000504948 CENPHQ9H3R5 247 aa9.35□□□□□ -0.91
ATP2C1-208ENST00000504948 ITSN1Q15811 1721 aa9.35□□□□□ -0.91
ATP2C1-208ENST00000504948 PHACTR2O75167 634 aa9.34□□□□□ -0.91
ATP2C1-208ENST00000504948 TRIM27P14373 513 aa9.34□□□□□ -0.91
ATP2C1-208ENST00000504948 EIF2S2P20042 333 aaKnown RBP9.34□□□□□ -0.91
ATP2C1-208ENST00000504948 CFAP70Q5T0N1 1121 aa9.34□□□□□ -0.91
ATP2C1-208ENST00000504948 CCDC186Q7Z3E2 898 aa9.34□□□□□ -0.91
ATP2C1-208ENST00000504948 AKAP12Q02952 1782 aa9.34□□□□□ -0.91
ATP2C1-208ENST00000504948 PHRF1Q9P1Y6 1649 aaKnown RBP9.34□□□□□ -0.91
ATP2C1-208ENST00000504948 ATF7IPQ6VMQ6 1270 aa9.34□□□□□ -0.91
ATP2C1-208ENST00000504948 SDF4Q9BRK5 362 aa9.34□□□□□ -0.91
ATP2C1-208ENST00000504948 PTGS1P23219 599 aa9.34□□□□□ -0.91
ATP2C1-208ENST00000504948 BRPF1P55201 1214 aaPredicted RBP9.34□□□□□ -0.91
ATP2C1-208ENST00000504948 FAM173BQ6P4H8 233 aa9.34□□□□□ -0.91
ATP2C1-208ENST00000504948 TRPM1Q7Z4N2 1603 aa9.34□□□□□ -0.91
ATP2C1-208ENST00000504948 ANKRD50Q9ULJ7 1429 aa9.34□□□□□ -0.91
ATP2C1-208ENST00000504948 ANKRD65E5RJM6 399 aa9.34□□□□□ -0.91
ATP2C1-208ENST00000504948 H0YHG0 523 aa9.34□□□□□ -0.91
ATP2C1-208ENST00000504948 SMAP1Q8IYB5 467 aaPredicted RBP9.34□□□□□ -0.91
ATP2C1-208ENST00000504948 FAM184AQ8NB25 1140 aa9.34□□□□□ -0.91
ATP2C1-208ENST00000504948 DDX11Q96FC9 970 aa9.34□□□□□ -0.91
ATP2C1-208ENST00000504948 CCDC34Q96HJ3 373 aa9.34□□□□□ -0.91
ATP2C1-208ENST00000504948 MIS18AQ9NYP9 233 aa9.34□□□□□ -0.91
ATP2C1-208ENST00000504948 MINK1Q8N4C8 1332 aaPredicted RBP9.33□□□□□ -0.92
ATP2C1-208ENST00000504948 BCL2L12Q9HB09 334 aa9.33□□□□□ -0.92
ATP2C1-208ENST00000504948 PIK3R4Q99570 1358 aa9.33□□□□□ -0.92
ATP2C1-208ENST00000504948 PTCH1Q13635 1447 aa9.33□□□□□ -0.92
ATP2C1-208ENST00000504948 RABEP1Q15276 862 aa9.33□□□□□ -0.92
ATP2C1-208ENST00000504948 LMAN1P49257 510 aa9.33□□□□□ -0.92
ATP2C1-208ENST00000504948 IRX3P78415 501 aaPredicted RBP9.33□□□□□ -0.92
ATP2C1-208ENST00000504948 TIGD1Q96MW7 591 aa9.33□□□□□ -0.92
ATP2C1-208ENST00000504948 CABP2Q9NPB3 220 aa9.33□□□□□ -0.92
ATP2C1-208ENST00000504948 GPS2Q13227 327 aa9.33□□□□□ -0.92
ATP2C1-208ENST00000504948 PLEKHG1Q9ULL1 1385 aa9.33□□□□□ -0.92
ATP2C1-208ENST00000504948 CCDC83Q8IWF9 413 aa9.32□□□□□ -0.92
ATP2C1-208ENST00000504948 TMEM63CQ9P1W3 806 aa9.32□□□□□ -0.92
ATP2C1-208ENST00000504948 CNPY2Q9Y2B0 182 aa9.32□□□□□ -0.92
ATP2C1-208ENST00000504948 NPHP4O75161 1426 aaPredicted RBP9.32□□□□□ -0.92
ATP2C1-208ENST00000504948 BIN1O00499 593 aa9.32□□□□□ -0.92
ATP2C1-208ENST00000504948 URI1O94763 535 aaPredicted RBP9.32□□□□□ -0.92
ATP2C1-208ENST00000504948 PHLPP1O60346 1717 aa9.32□□□□□ -0.92
ATP2C1-208ENST00000504948 ANKRD30AQ9BXX3 1397 aa9.32□□□□□ -0.92
ATP2C1-208ENST00000504948 CPA1P15085 419 aa9.31□□□□□ -0.92
ATP2C1-208ENST00000504948 GUCY1B3Q02153 619 aa9.31□□□□□ -0.92
ATP2C1-208ENST00000504948 ATP2B3Q16720 1220 aa9.31□□□□□ -0.92
ATP2C1-208ENST00000504948 TNMDQ9H2S6 317 aa9.31□□□□□ -0.92
ATP2C1-208ENST00000504948 NWD2Q9ULI1 1742 aa9.31□□□□□ -0.92
ATP2C1-208ENST00000504948 DHX8Q14562 1220 aaKnown RBP9.31□□□□□ -0.92
ATP2C1-208ENST00000504948 COL24A1Q17RW2 1714 aa9.31□□□□□ -0.92
ATP2C1-208ENST00000504948 OTUD7AQ8TE49 926 aaPredicted RBP9.31□□□□□ -0.92
ATP2C1-208ENST00000504948 KDM2BQ8NHM5 1336 aa9.31□□□□□ -0.92
ATP2C1-208ENST00000504948 NCBP3Q53F19 620 aaKnown RBP9.31□□□□□ -0.92
ATP2C1-208ENST00000504948 RGPD8O14715 1765 aaPredicted RBP9.31□□□□□ -0.92
ATP2C1-208ENST00000504948 GADD45BO75293 160 aaPredicted RBP9.31□□□□□ -0.92
ATP2C1-208ENST00000504948 LRMPQ12912 555 aa9.31□□□□□ -0.92
ATP2C1-208ENST00000504948 FKBP5Q13451 457 aaPredicted RBP9.31□□□□□ -0.92
ATP2C1-208ENST00000504948 AXDND1Q5T1B0 1012 aaPredicted RBP9.31□□□□□ -0.92
ATP2C1-208ENST00000504948 CCDC102AQ96A19 550 aa9.31□□□□□ -0.92
ATP2C1-208ENST00000504948 ISY1Q9ULR0 285 aaKnown RBP9.31□□□□□ -0.92
ATP2C1-208ENST00000504948 PLCH1Q4KWH8 1693 aa9.3□□□□□ -0.92
ATP2C1-208ENST00000504948 MLECQ14165 292 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms