RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 AKAP4Q5JQC9 854 aa34.18■■■■□ 3.06
PVT1-201ENST00000504719 FLAD1Q8NFF5 587 aa34.18■■■■□ 3.06
PVT1-201ENST00000504719 ATP6V1AP38606 617 aa34.17■■■■□ 3.06
PVT1-201ENST00000504719 ITPK1Q13572 414 aa34.17■■■■□ 3.06
PVT1-201ENST00000504719 LINC00116Q8NCU8 138 aa34.17■■■■□ 3.06
PVT1-201ENST00000504719 AK7Q96M32 723 aa34.17■■■■□ 3.06
PVT1-201ENST00000504719 SYT17Q9BSW7 474 aa34.17■■■■□ 3.06
PVT1-201ENST00000504719 VIRMAQ69YN4 1812 aaKnown RBP34.16■■■■□ 3.06
PVT1-201ENST00000504719 ZNF831Q5JPB2 1677 aa34.15■■■■□ 3.06
PVT1-201ENST00000504719 POLD1P28340 1107 aa34.15■■■■□ 3.06
PVT1-201ENST00000504719 AMIGO3Q86WK7 504 aa34.12■■■■□ 3.05
PVT1-201ENST00000504719 NFATC2IPQ8NCF5 419 aa34.12■■■■□ 3.05
PVT1-201ENST00000504719 MAP3K5Q99683 1374 aa34.11■■■■□ 3.05
PVT1-201ENST00000504719 U2SURPO15042 1029 aaKnown RBP34.11■■■■□ 3.05
PVT1-201ENST00000504719 MTHFSDQ2M296 383 aaKnown RBP34.11■■■■□ 3.05
PVT1-201ENST00000504719 SLC4A9Q96Q91 983 aa34.11■■■■□ 3.05
PVT1-201ENST00000504719 PPP2R1AP30153 589 aa34.1■■■■□ 3.05
PVT1-201ENST00000504719 RBM42Q9BTD8 480 aaKnown RBP34.1■■■■□ 3.05
PVT1-201ENST00000504719 DCAF8L1A6NGE4 600 aa34.09■■■■□ 3.05
PVT1-201ENST00000504719 CFAP53Q96M91 514 aa34.09■■■■□ 3.05
PVT1-201ENST00000504719 LGR6Q9HBX8 967 aa34.08■■■■□ 3.05
PVT1-201ENST00000504719 RNMTO43148 476 aaKnown RBP34.07■■■■□ 3.04
PVT1-201ENST00000504719 SSFA2P28290 1259 aa34.07■■■■□ 3.04
PVT1-201ENST00000504719 SMIM5Q71RC9 77 aa34.07■■■■□ 3.04
PVT1-201ENST00000504719 COL5A3P25940 1745 aaPredicted RBP34.07■■■■□ 3.04
PVT1-201ENST00000504719 ADAMTS7Q9UKP4 1686 aa34.06■■■■□ 3.04
PVT1-201ENST00000504719 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.06■■■■□ 3.04
PVT1-201ENST00000504719 PHF14O94880 888 aa34.06■■■■□ 3.04
PVT1-201ENST00000504719 MSL1Q68DK7 614 aa34.06■■■■□ 3.04
PVT1-201ENST00000504719 SLC52A2Q9HAB3 445 aa34.05■■■■□ 3.04
PVT1-201ENST00000504719 MRC1P22897 1456 aa34.04■■■■□ 3.04
PVT1-201ENST00000504719 GNPATO15228 680 aa34.03■■■■□ 3.04
PVT1-201ENST00000504719 PTCD1O75127 700 aaKnown RBP34.01■■■■□ 3.03
PVT1-201ENST00000504719 RC3H1Q5TC82 1133 aaKnown RBP34■■■■□ 3.03
PVT1-201ENST00000504719 NUDCQ9Y266 331 aa34■■■■□ 3.03
PVT1-201ENST00000504719 MYH14Q7Z406 1995 aaKnown RBP34■■■■□ 3.03
PVT1-201ENST00000504719 KLHL34Q8N239 644 aa33.99■■■■□ 3.03
PVT1-201ENST00000504719 CICQ96RK0 1608 aaPredicted RBP33.98■■■■□ 3.03
PVT1-201ENST00000504719 GAS2L2Q8NHY3 880 aa33.98■■■■□ 3.03
PVT1-201ENST00000504719 CNTNAP4Q9C0A0 1308 aa33.98■■■■□ 3.03
PVT1-201ENST00000504719 TJP1Q07157 1748 aa33.97■■■■□ 3.03
PVT1-201ENST00000504719 DDX10Q13206 875 aaKnown RBP33.97■■■■□ 3.03
PVT1-201ENST00000504719 RSPH6AQ9H0K4 717 aa33.97■■■■□ 3.03
PVT1-201ENST00000504719 RTCBQ9Y3I0 505 aaKnown RBP33.96■■■■□ 3.03
PVT1-201ENST00000504719 PRKAR2BP31323 418 aa33.94■■■■□ 3.02
PVT1-201ENST00000504719 PHACTR3Q96KR7 559 aa33.93■■■■□ 3.02
PVT1-201ENST00000504719 GNAT3A8MTJ3 354 aa33.92■■■■□ 3.02
PVT1-201ENST00000504719 U2AF1L5P0DN76 240 aaPredicted RBP33.92■■■■□ 3.02
PVT1-201ENST00000504719 U2AF1Q01081 240 aaKnown RBP eCLIP33.92■■■■□ 3.02
PVT1-201ENST00000504719 SLC39A6Q13433 755 aa33.92■■■■□ 3.02
PVT1-201ENST00000504719 TRAPPC3LQ5T215 181 aa33.92■■■■□ 3.02
PVT1-201ENST00000504719 RPS6KA4O75676 772 aa33.91■■■■□ 3.02
PVT1-201ENST00000504719 NLGN2Q8NFZ4 835 aa33.91■■■■□ 3.02
PVT1-201ENST00000504719 ADRA2BP18089 450 aa33.9■■■■□ 3.02
PVT1-201ENST00000504719 CRKLP46109 303 aaKnown RBP33.89■■■■□ 3.02
PVT1-201ENST00000504719 IL17REQ8NFR9 667 aa33.89■■■■□ 3.02
PVT1-201ENST00000504719 KCPQ6ZWJ8 1503 aa33.89■■■■□ 3.02
PVT1-201ENST00000504719 SIPA1L3O60292 1781 aaPredicted RBP33.88■■■■□ 3.01
PVT1-201ENST00000504719 FCHSD2O94868 740 aa33.88■■■■□ 3.01
PVT1-201ENST00000504719 ARHGEF1Q92888 912 aaKnown RBP33.88■■■■□ 3.01
PVT1-201ENST00000504719 YY1P25490 414 aa33.87■■■■□ 3.01
PVT1-201ENST00000504719 UBR2Q8IWV8 1755 aa33.87■■■■□ 3.01
PVT1-201ENST00000504719 C4AP0C0L4 1744 aa33.85■■■■□ 3.01
PVT1-201ENST00000504719 DNAJC10Q8IXB1 793 aa33.85■■■■□ 3.01
PVT1-201ENST00000504719 CD2APQ9Y5K6 639 aa33.85■■■■□ 3.01
PVT1-201ENST00000504719 TEFQ10587 303 aa33.83■■■■□ 3.01
PVT1-201ENST00000504719 CHD4Q14839 1912 aa33.83■■■■□ 3.01
PVT1-201ENST00000504719 RFC4P35249 363 aa33.82■■■■□ 3
PVT1-201ENST00000504719 GPR162Q16538 588 aa33.82■■■■□ 3
PVT1-201ENST00000504719 INTS5Q6P9B9 1019 aaKnown RBP33.82■■■■□ 3
PVT1-201ENST00000504719 CEMIPQ8WUJ3 1361 aa33.82■■■■□ 3
PVT1-201ENST00000504719 VSIG10Q8N0Z9 540 aa33.8■■■■□ 3
PVT1-201ENST00000504719 ZNF316A6NFI3 1004 aaPredicted RBP33.79■■■■□ 3
PVT1-201ENST00000504719 CYP19A1P11511 503 aaPredicted RBP33.79■■■■□ 3
PVT1-201ENST00000504719 GYS1P13807 737 aa33.79■■■■□ 3
PVT1-201ENST00000504719 TTC5Q8N0Z6 440 aa33.79■■■■□ 3
PVT1-201ENST00000504719 NLGN1Q8N2Q7 840 aa33.79■■■■□ 3
PVT1-201ENST00000504719 MMP10P09238 476 aa33.78■■■■□ 3
PVT1-201ENST00000504719 RALBP1Q15311 655 aa33.78■■■■□ 3
PVT1-201ENST00000504719 CCDC87Q9NVE4 849 aa33.78■■■■□ 3
PVT1-201ENST00000504719 UTRNP46939 3433 aa33.77■■■■□ 3
PVT1-201ENST00000504719 ZNF790Q6PG37 636 aa33.76■■■□□ 2.99
PVT1-201ENST00000504719 PELP1Q8IZL8 1130 aaKnown RBP33.76■■■□□ 2.99
PVT1-201ENST00000504719 ZNF496Q96IT1 587 aaPredicted RBP33.73■■■□□ 2.99
PVT1-201ENST00000504719 SOS1Q07889 1333 aaPredicted RBP33.73■■■□□ 2.99
PVT1-201ENST00000504719 RTF1Q92541 710 aaKnown RBP33.72■■■□□ 2.99
PVT1-201ENST00000504719 SRP68Q9UHB9 627 aaKnown RBP33.72■■■□□ 2.99
PVT1-201ENST00000504719 USP42Q9H9J4 1324 aaKnown RBP33.72■■■□□ 2.99
PVT1-201ENST00000504719 KIF13BQ9NQT8 1826 aa33.72■■■□□ 2.99
PVT1-201ENST00000504719 DLG5Q8TDM6 1919 aa33.71■■■□□ 2.99
PVT1-201ENST00000504719 HEG1Q9ULI3 1381 aa33.71■■■□□ 2.99
PVT1-201ENST00000504719 HTATSF1O43719 755 aaKnown RBP33.7■■■□□ 2.99
PVT1-201ENST00000504719 YBX3P16989 372 aaKnown RBP eCLIP33.7■■■□□ 2.99
PVT1-201ENST00000504719 MCM10Q7L590 875 aa33.7■■■□□ 2.99
PVT1-201ENST00000504719 ZBTB1Q9Y2K1 713 aa33.7■■■□□ 2.99
PVT1-201ENST00000504719 BTBD11A6QL63 1104 aa33.69■■■□□ 2.98
PVT1-201ENST00000504719 PLEKHF1Q96S99 279 aa33.69■■■□□ 2.98
PVT1-201ENST00000504719 NEFMP07197 916 aa33.67■■■□□ 2.98
PVT1-201ENST00000504719 FMNL2Q96PY5 1086 aa33.67■■■□□ 2.98
PVT1-201ENST00000504719 KCNQ3O43525 872 aa33.66■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms